Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01754 ATGCCGGTTCTGAGAATTCATGGATATGCCTTGGCTGTTTCGTTTTGTCTTATCACCCTCATAGCAGCCTCACAACGAACAGACCCTTCAGAAGTTAATGCGCTGATTGACATCAAGAAAAGTTTGATTGATCCTTATAACAATCTTGAGGACTGGAACGAAGGAGATCCATGTGCAGCAAATTGGACTGGAGTTTGGTGTTTTGATAAGAAAGGGGCTGATGGGTACTTCCATGTTCGCGAGATCTACTTAATGACAATGAATCTCTCGGGAACTCTATCACCTCAGCTTGGTCAGCTATCTCAGCTTGAGATAATGGATTTCATGTGGAACAACCTGACAGGCACAATACCAAAGGAGATTGGATATATTCAATCATTGAAACTCTTGCTGCTGAATGGGAATAAGTTATCCGGTAGTTTACCAGATGAGCTTGGCTATCTTTCAAATTTGAATAGATTCCAAGTAGACGAAAACCACTTGTCTGGTCCTATACCAGAGTCATTTGCCAACTTGACCAATGTTAGACACATTCACATGAACAACAACTCATTTAGTGGTCAACTTCCATCCACCCTTTCAAAGCTAGCAAATCTTATGCACCTGCTTGTGGACAACAATAACTTTTCTGGCTATCTTCCACCAGAATACTCCATGTTAGATGGATTGGCGATCCTCCAGCTTGATAACAACAATTTTAGCGAGAGTGGAATTCCTTCTACCTATGCAAACCTAACCAGGCTAGTGAAATTAAGTGTAAGAAACTGCAATCTGCATGGAGCTGTTCCTGATTTCAGTTCAATACCCGAGCTTACCTATTTAGATCTTAGCTGGAATCAGTTCACTGGACCCATACCATCAAATAAACTGTCAGACAATATGACAACTATTGACCTGTCCAATAATCATCTAAACGGATCTATTCCTCGAAGCTTATCGTATTCTCATCTTCAAAAATTGTCACTTGCGAACAATTTTCTGTCTGGGTTCATCCCTGCTAGCTTATGGCGAAACATGTCCTTTGGTGAGAAAGATAAACTTACAATTGATCTCCATAACAATTCGTTTGAGGCTGTTTTGGGAAATTTGAACCTTCCGGCAAATGTTACCTTAAGGCTTTCTGGTAACCCTATCTGCATGAATTCTAACATACAAAGCATTGGTCAATATTGTGGAGCTGAAGGAGATGAGGCAGCTTCATACCCAATAAACTCAACACCTGTCTGTCCCGTTCAATCTTGTCCTAAGGATAACTTTTATGAATATTGCCCCTCTTCCCCAGTTCCTTGCTTTTGTGCAGCACCTCTGAGAATTGGATACAGGCTGAAAAGTCCAAGCTTTTCTTACTTTGCTCCCTATAGAATTAGTTTTGAACGCTATATAACCAACTCCTTACAATTAGATCTGTATCAACTATCAATAGACTCGGTTGCTTGGGAAAATGGACCTCGTCTTAGGATGTACTTGAAACTCTTCCCTTCCTATAATGATTCCCATTCTAATATGTTCAATATAAGTGAGGTCCGTCGCATTAAAGGCTTATTTTCATCATGGAAATTTCCTCGCACTGATTTTTTTGGACCATATGAACTCCTAAACTTCACTCTTCTTGGACCTTATGAAAGTATGGATCTTGATTTGGAGAAGAGAAAAATTAGTGTGGGCATAATAGTTGCTGCTGTAATAGCAGCTGTTGCTTGTGTTGTAGCAATATCTGCAATAGTCATTCTCCTGATTTCTAGAAGACATATGAAATACCAGAAAAAGATTTCCAAGAAACGAACGTCTACTAATGTATCCATCAAAATAGATGGCATGAAAACATTTACTTACAAAGAATTGGCTCTCGCTACTAACAAATTTAATATCTCAAATAAAGTTGGTCAAGGAGGTTATGGGAATGTCTATAGAGGTATTTTATTCAATGAAACATTTGTGGCCGTTAAGCGAGCTGAAGAAAGTTCCTTACAAGGACAAAAGGAGTTTCTGACTGAGATTGAGCTGTTGTCAAGGTTACACCATCGAAATCTTGTCTCACTGATTGGATACTGTAATGAAGAAGGGGAGCAGATGCTGGTTTACGAATTCATGCCCAATGGCACCCTAAGGGACTGGATTTCAGGTAATAGTAAAGAAACAAGGGGAAGCCTAAGTTTTTGTATGAGATTGAGAATTGCAATGGGAGCAGCCAAAGGCATACTGTATCTGCATACAGAGGCTAACCCTCCTATATTCCACCGAGATATAAAAGCCAGTAACATTCTTCTGGACTCTAAGTTTACAGCTAAAGTGGCCGATTTTGGACTGTCACGGCTTGTACCATACTTAGATGAAGAAGGAACTGCTCCTAAATATGTGTCAACAGTTGTGAAAGGAACACCAGGTTATCTGGACCCAGAATATCTGTTGACTCATAAGCTGACAGACAAATGTGATGTGTATAGCCTGGGAATTGTGTATCTTGAGCTTTTGACAGGCATGCGACCAATATCTCATGGGAAAAACATTGTGCGCGAGGTTAATATGGCTCGTGAATCTGGTACAACATATTCCATCATAGACAGCAGAATGGGGTTATATCCATCAAATTGTTTGGACGAGTTTTTAGCTCTGGCCCTCAGTTGTTGCCAAGACAATCCAGAGGAGAGACCATCAATGATTGATGTGGTGAGGAAACTGGAAGATATCATTGCAATGTTGCCCGAAGCTGAAACTCTTCTCTCAGATGTTAGCTTAGACAGTTCTGGTAACATAGCACCGTCATCATCAGCATCAACATCAGGATCTCATGTGATAAGGGAGGAACAACACATTTCCTCATGTGTGTCAGGAAGTAATCTTGTCAGTGATGTCACTCCCATCATTGTTCCTCGCTGATACCATGTGTACTATGCTATAGTCTCCTTCACATATTCCCAAAAAATGTAATTATATTTTTTTATTCTAAGATTTTGATAAATGGTAAAGTAGGAAGTTTATTAGGGATGTAGCTATTATCTGCACTTCCCATCTGGGAACTTGTAAATTTTATACTCATAATTGTAGGAGAATACTATATACCATTGGAG 3068 0.3977 MPVLRIHGYALAVSFCLITLIAASQRTDPSEVNALIDIKKSLIDPYNNLEDWNEGDPCAANWTGVWCFDKKGADGYFHVREIYLMTMNLSGTLSPQLGQLSQLEIMDFMWNNLTGTIPKEIGYIQSLKLLLLNGNKLSGSLPDELGYLSNLNRFQVDENHLSGPIPESFANLTNVRHIHMNNNSFSGQLPSTLSKLANLMHLLVDNNNFSGYLPPEYSMLDGLAILQLDNNNFSESGIPSTYANLTRLVKLSVRNCNLHGAVPDFSSIPELTYLDLSWNQFTGPIPSNKLSDNMTTIDLSNNHLNGSIPRSLSYSHLQKLSLANNFLSGFIPASLWRNMSFGEKDKLTIDLHNNSFEAVLGNLNLPANVTLRLSGNPICMNSNIQSIGQYCGAEGDEAASYPINSTPVCPVQSCPKDNFYEYCPSSPVPCFCAAPLRIGYRLKSPSFSYFAPYRISFERYITNSLQLDLYQLSIDSVAWENGPRLRMYLKLFPSYNDSHSNMFNISEVRRIKGLFSSWKFPRTDFFGPYELLNFTLLGPYESMDLDLEKRKISVGIIVAAVIAAVACVVAISAIVILLISRRHMKYQKKISKKRTSTNVSIKIDGMKTFTYKELALATNKFNISNKVGQGGYGNVYRGILFNETFVAVKRAEESSLQGQKEFLTEIELLSRLHHRNLVSLIGYCNEEGEQMLVYEFMPNGTLRDWISGNSKETRGSLSFCMRLRIAMGAAKGILYLHTEANPPIFHRDIKASNILLDSKFTAKVADFGLSRLVPYLDEEGTAPKYVSTVVKGTPGYLDPEYLLTHKLTDKCDVYSLGIVYLELLTGMRPISHGKNIVREVNMARESGTTYSIIDSRMGLYPSNCLDEFLALALSCCQDNPEERPSMIDVVRKLEDIIAMLPEAETLLSDVSLDSSGNIAPSSSASTSGSHVIREEQHISSCVSGSNLVSDVTPIIVPR 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01754 958 ProSitePatterns Protein kinases ATP-binding region signature. 627 649 IPR017441 GO:0005524
Pste5g01754 958 SMART serkin_6 621 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01754 958 ProSiteProfiles Protein kinase domain profile. 621 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01754 958 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Pste5g01754 958 Gene3D Ribonuclease Inhibitor 185 289 IPR032675 -
Pste5g01754 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Pste5g01754 958 SUPERFAMILY L domain-like 44 385 - -
Pste5g01754 958 PANTHER RECEPTOR-LIKE PROTEIN 55 38 896 - -
Pste5g01754 958 Pfam Protein kinase domain 622 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01754 958 CDD STKc_IRAK 627 896 - -
Pste5g01754 958 FunFam Leucine-rich repeat protein kinase family protein 585 696 - -
Pste5g01754 958 Gene3D Phosphorylase Kinase; domain 1 581 696 - -
Pste5g01754 958 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 29 190 - -
Pste5g01754 958 Gene3D Ribonuclease Inhibitor 29 184 IPR032675 -
Pste5g01754 958 Gene3D Transferase(Phosphotransferase) domain 1 697 907 - -
Pste5g01754 958 SUPERFAMILY Protein kinase-like (PK-like) 606 911 IPR011009 -
Pste5g01754 958 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 697 909 - -
Pste5g01754 958 Gene3D Ribonuclease Inhibitor 290 437 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01754 Pste-Chr5 11156287 11165712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01754 5 905 Receptor kinase-like Gene Family AT5G01950 60.994 0.0 1100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pste5g01754 Pkinase 6.7e-48 CL0016