Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01740 AGCAAGTATAGCATCCATCCGAAATGGTTGCTTCTCTCTTTTTGTTTTTCTTATATGGTTTGTGCTCTGCCCCACCCATCTCTGTCTCTCTCCCCACTCTGTGGCGCATTTCCCTGAACACCACTGCACAACCAAACCCAGAAGCAGAGAGAACACCATCAACCCTTCCCTTCTCTTCTCCTCACTCGACACTCTCCAATCCCTAAACCCTTCTTCCAATTCCCAATTTCATGATTCCCACTAATTAGGGTTATGGAACCCAACAACTCTCCCTCCTCCCCGAATTCCAGGCGCTACTCCGGTTTTCTATCCGCCTCCAACATCATTCAGGCCCCCTTATCGCTCCTCTTGGAATATTCCGGCATCCTTCCCTCGCGTTCCTCCACCCCCGACGCCGTCAACAATGACGCCGAGGTTTCCATTCGGATCATCGGCCCCGCCGAACAGGACCCCTCCCCTCCTCCCTCCCCCAACGACGTCCTCATCCCCTCCTCTTCCCCTCGCTCCGCCGCCGACTCCGCCGCCCCTTCCGATGCTCCCCCCGCCGTTGTCGATCCCCTTCCCAGGGATTCTTCCTACCAGAGATATGACATTCAGCATGCAGCCCGGTGGATTGAGCAGGTCTTGCCGTTTTCCTTGCTTCTCTTGGTCGTCTTCATAAGGCAGCATTTGCAAGGCTTTTTTGTCACCATTTGGATTGCTGCTGTCCTTTTCAAGTCCAATGACATTCTCCGTAAACAAACTGCGCTCAAGGGTGAGAGAAAGATACCGCTTTTGATTGGGATTTCTGTTGGGTTTGCTCTTCATGTGGTTGCTGTGTATTGGTGGTATCAGAATGATGATCTAATGTATCCCTTGATCATGCTTCCTCCCAAGGATATACCGCCTTTTTGGCACGCCATATTCATCATCATGGTCAATGATACTTTGGTCCGTCAGGCTGCAATGGTATTCAAGTGTATATTGTTGATGCATTACAAGAATAGCAGAGGCCGAAATTATCGTAAGCAGGGTCAAATGCTGACTTTAGTTGAATACCTCCTCCTGCTTTACCGTGCCTTGTTGCCAACACCAGTTTGGTATCGTTTCTTCCTGAACAAGGAATATGGAAGCCTCTTTTCATCACTGATGACAGGATTGTATCTAACATTCAAACTCACATCTGTGGTTGAAAAGGTGCAATCCTTCTTTGCTTCTGTGAAGGCGTTATCACGGAAAGAAATGCACTATGGGGCTTATGCAACATCAGAGCAGGTCAATGCAGCTGGTGATCTTTGTGCTATTTGTCAGGAGAAGATGCATGCCCCAATCTTACTACGTTGTAAACATATTTTCTGTGAAGATTGTGTATCAGAGTGGTTTGAGAGAGAAAGGACCTGCCCGTTGTGCAGGGCTTTGGTAAAACCAGCAGACCTTAGGTCATTTGGGGATGGCTCCACTAGCTTGTTTTTCCAGTTATTCTGAAATCATATACAAATACCACAAGCCAGGAAGTTTTTTCTGCTCTGAATCTTTACTTTTTCAAAGCAGCAGTCACGATCTGTGTACATCAACACATGGAAAATGCTCTTGAGGCAATCGTGGGGATACTGAGAAGATGAATGCAGCAGAATACCGGTCATGCGTTCATATAATGTACTAGTGAAAGGTTGAGTGTATCTAAATGACCCTGTAAACTAGGAAGTCGATTGAAAATATAATTAAACACACGACTCTTCATTTGCAAGGAATGAAGGAGGTCTCTTTCTCTGAATTGCATTGCGATTCTGTTATATATATTGCCAATCAAACTGTTAATTTTAAACGTATTTTTATGTTCGAATTTCTCTTTATGTGGGTTTTGAAGCACACACCTCAAGGAGTGTAAGCCCACGGGTTATGGCCAGGCCAACGATCTCACTTGGATTCATGTATTAAATATGTGGATACTATCTTATTTTGTAATAGCTAATTTGACCATG 1961 0.4569 MEPNNSPSSPNSRRYSGFLSASNIIQAPLSLLLEYSGILPSRSSTPDAVNNDAEVSIRIIGPAEQDPSPPPSPNDVLIPSSSPRSAADSAAPSDAPPAVVDPLPRDSSYQRYDIQHAARWIEQVLPFSLLLLVVFIRQHLQGFFVTIWIAAVLFKSNDILRKQTALKGERKIPLLIGISVGFALHVVAVYWWYQNDDLMYPLIMLPPKDIPPFWHAIFIIMVNDTLVRQAAMVFKCILLMHYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFFASVKALSRKEMHYGAYATSEQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01740 403 CDD RING-HC_RNFT1-like 340 380 - -
Pste5g01740 403 ProSitePatterns Zinc finger RING-type signature. 357 366 IPR017907 -
Pste5g01740 403 SUPERFAMILY RING/U-box 334 385 - -
Pste5g01740 403 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 316 390 IPR013083 -
Pste5g01740 403 ProSiteProfiles Zinc finger RING-type profile. 342 380 IPR001841 -
Pste5g01740 403 Pfam Zinc finger, C3HC4 type (RING finger) 340 383 - -
Pste5g01740 403 MobiDBLite consensus disorder prediction 61 102 - -
Pste5g01740 403 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 11 403 IPR044235 GO:0061630|GO:1904294
Pste5g01740 403 SMART ring_2 342 379 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01740 Pste-Chr5 11075635 11079886 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01740 11 403 C3H Transcription Factor Family AT5G01960 73.671 0.0 621
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01740 5 11075635 11079886 Pste5g01740 5 11075635 11079886 ECH