Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01731 CCACCACAGTGCGAGGTTCCATCACTCAGCAACCGTTCTTTCCAACTTTCTCTCGCTTTTTGAGTTCGTAACCCTAAATTTGAGATGGCAGAAGAGGATCCAAAGCCTCTCAACTACATTTCCGAAGTTGTACTCAAGAAGAGGAAAAGAAACGAAGCATGGGCTTTGAGAAAGAAAGAACAATTCCAGCGCAAGAATTTCCAATCCATCAAGAAACCCGAGGATTTCATCCACGAGTATCGCAACAGGGAGGTGGACCTTATTAGAATGAAACGGAGGCTGAAACGGAAAGTGCCTCATGCTAACTCCAACACGTTGATAATCATTCGTATACAGGGGAAAAAGGACATGCATCCGATGACGAGGAAGGTGTTGTACAGCTTTGGGTTGAGGAAAGTGTTCAGTGCTGTGTTTGTGAAGCCTAGTGAGGGAGTGATGGCCAAGTTGCAGAGGGTGGAACCCTTTGTGACCTATGGCTATCCAAATCTTAAAAGCATAAAGGAGCTTGTTTACAAGAAAGGACTTGCAAGGGTGGATAACCGTAAAGTTCCATTGACGGATAATAACATTATTGAGCAGGAATTAGGAAAGTTTGGTATTGTCTGCCTAGAAGACATGGTTCATCAGATTTATAATGCTGGTCCACACTTCAAGGAAGTTGTCAGATTTATGTGGCCCTTTGAGCTCAACAAGCCAGGAGAAGGATTGAAAGGATCAAAAACCCTATACAAGGATGGTGGAGATACAGGGAACCGTGAGGATCTCATCAATGCACTAATCAATAAAATGAATTAGTGGCCCTTGTAGTATCAAAATTTTGATGTTCAAGTATCTCATTTTTTAAGTAACCAATTTATTACCTAGAAAACGTTTTTACAGGTTCTTGTTATAGTTAAGTTTGTATTTATCTTTACAGCCTTCCTTTGTTGCATTTTGCTTTCCATTAGGCATTTGGAGAGGCCGGGGTGGAGAAGAAAGGTATGGGCAGGATGTGCTATGGGGCTTGAATCCGTGTATTCTCAATATATTTTAACTGTCAACAACGATTATTCAAGTCTGAATGAAATTTTCATTACAAGGTGGACGGAAATGTGATAGTATATTGGGTATCATTGTTAAAGGCTCTTACTCTAGTTTCCAATGATCAATTGTGGATTCGAAACTTCAATTTGTAGAGCTTTTAACCTGCCCTACATCTATTGACTTAATCTACTAATCAACGCTCTTTCGCAAGCTCTTGGTGAAATAGTGACAAACTCGGTTACAATAAATTTGCTCTATTATAGGCGTTTGCTTCACGACAGTTTGCTGTATAAGTGCATCCTGGTAGGAAAATAACTACAGTCTACTATAGGCATACGCCTTGGTATAAATTTGATTTACAGTTTAAATTCATGATCAACGAAAAAAGACATGTATTTTAAGACAAAACAAAAATAATCTAAGTGTAACTTGTTTGAATGTAA 1466 0.3922 MAEEDPKPLNYISEVVLKKRKRNEAWALRKKEQFQRKNFQSIKKPEDFIHEYRNREVDLIRMKRRLKRKVPHANSNTLIIIRIQGKKDMHPMTRKVLYSFGLRKVFSAVFVKPSEGVMAKLQRVEPFVTYGYPNLKSIKELVYKKGLARVDNRKVPLTDNNIIEQELGKFGIVCLEDMVHQIYNAGPHFKEVVRFMWPFELNKPGEGLKGSKTLYKDGGDTGNREDLINALINKMN 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01731 236 Gene3D - 78 236 IPR036919 -
Pste5g01731 236 CDD Ribosomal_L7_archeal_euk 78 236 IPR035808 -
Pste5g01731 236 PANTHER 60S RIBOSOMAL PROTEIN L7 9 236 IPR039699 -
Pste5g01731 236 Pfam Ribosomal protein L30p/L7e 78 128 IPR016082 -
Pste5g01731 236 FunFam 60S ribosomal protein L7 77 182 - -
Pste5g01731 236 NCBIfam 60S ribosomal protein uL30 17 236 IPR005998 GO:0000463|GO:0003735|GO:0022625
Pste5g01731 236 SUPERFAMILY Ribosomal protein L30p/L7e 79 236 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01731 Pste-Chr5 11010104 11012748 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01731 1 236 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 51.012 6.51e-84 248