Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01730 ATGGAGTCCAATTCAGTATCCAGTGAACAGTGCCCATGTCTTGAACGAAACCAGTCAGTGAAATTGACAAGGCCCAAAGAGAGAGTGGGAATGGAAGCTGAAGGTCAACGGCGGATTTCAGGGAGAGACATATGCTGGTCAGTAGTGTTCATAGTAGCATGGAACATCATAATATTATTATATCAGAAGCTGTGGTTTAGGCCTCAAAGGATCCGTTCAGTTCTTCTGCAACAAGGCATCAATGGACCAAAGCCTTTCTTTCCCTTTGGCAACACCTCTGACATGCAACAGATAAACCAAACTCCTCATATTTCTCTTGAAGCCTTGGACGAATGGACTTCTTGCATCTTCCCACATTTCCATTCATGGAAGCAAAGCTATGGTCCATTGTTCCTCTACGCCACTGGAACCAAACAAAATCTTTATGTGGAGATACCTGAATTAATAAAATCGATTGGTATGCACAAATCCTTGGATCTAGGCAGACCTTCGTATCTGACGAAAACATTGAAGCCTTTGCTAGGTAACGGCATCATTAGGTCTAATGGACTGAATTGGGCCTTCCAGAGGAATCTGCTTGCTCCTGAGTTTTTCCAGAGCAAAATTAAGAATTGGATGGATATAATGGAAGAATCAACCACGACAATTATCAAAAAATGGGAGAACCATATAGCAGAAAGTGGAGGGGGGACTGTAGAGTTGGAGATTGATGGAGACATTAAGGCTCTCACGGCCGATGTTATTTCAAAAGCTTGTTTTGGTAGCACTTATGCTCAAGGCAACTTAATTTTTGCAAAATTGGCCGCTATGCAAAAGGCACTGTCAAAGCCAAGTATTCTCTTTGGATTTGTAAACCTAAGGTTTCTTCCCACCAAGGAAAACAAAGAATTATGGAAGTTGAAGCAAGAGGTGGAAACAATGATACTAAAAATGATCAAAGACCGTGAAGCAGTAAACCAAAAGAGTAGCACATATGGGAATCAAAAGGATCTATTACAAATAATACTAGATGGTGCTGCTAGTGCCACCACTGATACTAGTGGAAAGGGTGTTTTGGGCCCCGGATATAACATAAACCAGTTGATTCTAGACATGTGCAAAAATATTTACTTTGCAGCATCTGAGAGCACTGCTCTTGCAATTACTTGGACACTGTTTCTGCTTGCTTTGTATCCTGAATGGCAACAACGTGTTAGATCTGAGATTATGGAGACCTACTGTAACGGGTTGCCTCATTCCTTTCATGACATGGACAAACTTCGAAAGTTGAAAGCACTAACAATGGTGATTCAAGAGAGTCTACGTCTTTACGGGCCTGCAGTTACAAACTCAAGGGAAGTGTTTACAGAGACGAAGTTGGGGAAACATGTGCTGCCTAGAGGCATCATCATGTGGTTTTTCATGCCCTCATTGCACCGTGACCCTGATAATTGGGGACCACATGCTAAGGAATTCAGGCCAGAAAGGTTTGCTGATGGCGTTTCTGGGGCATGTAAGTATCCGCAAGCTTATATCCCATTCGGCCTCGGGAGTCGAATTTGCATAGGCCAAAACTTTGCCTTATTACAAATAAAGGAAGCACTGTGTCTTCTTCTGTCCAACTTCTCGTTTTCTGTTTCACCAAACTATTGTCATTGTCCTGTGAATATAATGTTGTTAACGCCAAAATATGGTATGAGGCTTCTTGTTAGCAAGGTTCACAGGACCGGGTTATAGTTCAGATTCTGCACTGTGTTTTCCAAACATGTGACCAAGACTAGTTATATTTATCTACTGATTTAGTATGTATTTGGGCATCGGTTGGTTCAACTTAATTCCAC 1820 0.4187 MESNSVSSEQCPCLERNQSVKLTRPKERVGMEAEGQRRISGRDICWSVVFIVAWNIIILLYQKLWFRPQRIRSVLLQQGINGPKPFFPFGNTSDMQQINQTPHISLEALDEWTSCIFPHFHSWKQSYGPLFLYATGTKQNLYVEIPELIKSIGMHKSLDLGRPSYLTKTLKPLLGNGIIRSNGLNWAFQRNLLAPEFFQSKIKNWMDIMEESTTTIIKKWENHIAESGGGTVELEIDGDIKALTADVISKACFGSTYAQGNLIFAKLAAMQKALSKPSILFGFVNLRFLPTKENKELWKLKQEVETMILKMIKDREAVNQKSSTYGNQKDLLQIILDGAASATTDTSGKGVLGPGYNINQLILDMCKNIYFAASESTALAITWTLFLLALYPEWQQRVRSEIMETYCNGLPHSFHDMDKLRKLKALTMVIQESLRLYGPAVTNSREVFTETKLGKHVLPRGIIMWFFMPSLHRDPDNWGPHAKEFRPERFADGVSGACKYPQAYIPFGLGSRICIGQNFALLQIKEALCLLLSNFSFSVSPNYCHCPVNIMLLTPKYGMRLLVSKVHRTGL 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01730 571 SUPERFAMILY Cytochrome P450 111 563 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01730 571 Pfam Cytochrome P450 119 560 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01730 571 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01730 571 PRINTS P450 superfamily signature 372 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01730 571 PRINTS P450 superfamily signature 514 525 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01730 571 PRINTS P450 superfamily signature 505 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01730 571 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 507 516 IPR017972 GO:0005506|GO:0016705
Pste5g01730 571 Gene3D Cytochrome P450 65 568 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01730 571 PRINTS E-class P450 group I signature 124 143 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01730 571 PRINTS E-class P450 group I signature 361 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01730 571 PRINTS E-class P450 group I signature 381 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01730 571 PRINTS E-class P450 group I signature 243 261 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01730 571 PRINTS E-class P450 group I signature 514 537 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01730 571 PRINTS E-class P450 group I signature 504 514 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01730 571 PANTHER CYTOCHROME P450 FAMILY MEMBER 57 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01730 Pste-Chr5 10993250 10996588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01730 148 563 Cytochrome P450 AT5G24900 41.667 2.57e-121 362