Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste5g01729 | GTTGGAGGGTGGAAAGGAAAGAAAGTAACGAAATTAGTTATGAGAGAAGGGAGTTTCCGCTTATGGTGCAAAGCAAACCAAAAGGACGCGGTGTTGAGAGGTTGGTGGGATGGGGAAGGTAGGCCCCACCACCTTGGTCGATGGTGCTGGCGAACATGGATCATCATCTCTCAGAACCCAGCACTCCGACCACCCCGAGATCCACCCTCTTTCTCTCCGCCTCAGGCAAAGCCCTTCTCCTCTCCAACTCAAACAAATCCCTTCTCAACTCCAACTCCAACTCCAACTCCAATTCCAACTCCAACTCCGCCAAGCGCCTCGACACCCCCAAGAAGAAGTATGTCAAACAGGTCACCGGCCGCCACAACGACACCGAGCTCCACCTCGCCGCCCAGCGCGGCGACGTCGCCTCCGTCCGCCACATCCTCAACGAATTCGACTCCATCATGATGGGATCCCTCGAGTTCGACGCCGACGTTGCCGACATTAGGTCCGCCATCTTCAACGAGGTCAATGAGCTCGGAGAAACCGCTCTCTTCACCGCCGCCGAAAGGGCCCACCTCCCCGTCGTCATGGAGCTCCTTCCTTTCGCCACCCCTCAATCTCTCTCCTTCAAAAACCGCTCCGGCTTTGACCCCTTGCACATTGCCGCCAGCAAAGGTCATCTTGCCATTGTGCAGGTGCTACTAGACCATGAGCCTGGGTTGATCAAGACGACTGCGCAGTCAAATGCAACTCCTCTTATCTCAGCAGCTACGCGGGGACATGCTGCTGTTGTTGAAGAGTTGTTGTGTCGGGATCCTACACAGTTGGAGATGACCAGATCAAATGGAAAAAATGCACTCCATTTAGCTGCACGCCAGGGACATGTGGATGTTGTAAGGATACTGCTACATAAGGATCCACAACTTGCTCGAAGGACGGACAAGAAAGGACAAACTGCACTTCACATGGCTGTCAAAGGGGTTAGTTGTGAAGTCGTCAAGCTCATTCTTGCTGCTGATGTAGCCATTGTCATGCTTCCCGACAAGTTTGGCAATACTGCACTGCATATTGCCACAAGGAAGAAGAGGGTAGAGATAGTAAGTGAGCTGTTACTTCTTCCTGACACCAATGTAAATACCTTGACAAGAGACCACAAGACAGCTCTAGATCTTGCAGAGGGACTTCCAATATCTGAGGAAATTCTAGAGATCAAAGAGTGTCTGATTCGTTATGGTGCAGTTAAAGCCAATGATGTCAACCAACCAAGGGATGAGCTAAGGAAAACTATGACAGAAATTAAGAAAGATGTCTATTTTCAACTGGAACAAGCTCGGAAAACGAATAGGAATGTTAGTGGGATTGCCAATGAGCTACGCAAATTGCATAGAGCTGGAATCACCAATGCTGCCAACTCAGTGACGGTGGTAGCTGTGCTATTTGCAGCAGTTGCATTTGCAGCACTTTTCACAGTTCCTGGTGGGGATAATGATAATGGGGTGGCAGTGATGGTACACACTGCGTCTTTCAAGGCCTTCTTCATATCTAATGCCATTGCACTGTTTACATCATTATCTGTGGTGGTGGTTCAAATCACAATTGTTAGAGGGGAGATGAAGGCTGAGAGAAGGGTTGTGGAGGTGATCAACAAGATGATGTGGTTAGCCTCTGTATGCACCTCTGTTTCGTTTGTTACAGCATCTTATATAGTAGTTGGTCGACGCAGCCAGTGGGCTGCAATTCTTGTTACCGTTATAGGGGCCATAGTAATGGGTGGTGTTCTAGGTACCATGACATACTATGTGGTGAAATCCAAACGCTCCCGAAGAGTAAGGAAGAAACAAAAGATCTCTACAACAGGAACAGATTCCAATTCTGATGATTCAGAATTGAATCCAATATATGCAATTTGATGTTACTTTGATGCTTCTGTTCAATGCTTTTTTATTGGACAAGCATTGACAAGCAAGCTTAATTTGGAGGTTTCATTTGTTCATAGAGAAATTAAAAGTATGGCTTTTATGTAAATGGCTCCTTGTTAAGTGTTTCAAAGGAAACATTATAAAGGAAGCGGCAGTGGTTAGTTACTATACTATAAGTTTCTAATAAAGGTCCCATTT | 2102 | 0.4715 | MVLANMDHHLSEPSTPTTPRSTLFLSASGKALLLSNSNKSLLNSNSNSNSNSNSNSAKRLDTPKKKYVKQVTGRHNDTELHLAAQRGDVASVRHILNEFDSIMMGSLEFDADVADIRSAIFNEVNELGETALFTAAERAHLPVVMELLPFATPQSLSFKNRSGFDPLHIAASKGHLAIVQVLLDHEPGLIKTTAQSNATPLISAATRGHAAVVEELLCRDPTQLEMTRSNGKNALHLAARQGHVDVVRILLHKDPQLARRTDKKGQTALHMAVKGVSCEVVKLILAADVAIVMLPDKFGNTALHIATRKKRVEIVSELLLLPDTNVNTLTRDHKTALDLAEGLPISEEILEIKECLIRYGAVKANDVNQPRDELRKTMTEIKKDVYFQLEQARKTNRNVSGIANELRKLHRAGITNAANSVTVVAVLFAAVAFAALFTVPGGDNDNGVAVMVHTASFKAFFISNAIALFTSLSVVVVQITIVRGEMKAERRVVEVINKMMWLASVCTSVSFVTASYIVVGRRSQWAAILVTVIGAIVMGGVLGTMTYYVVKSKRSRRVRKKQKISTTGTDSNSDDSELNPIYAI | 584 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste5g01729 | 584 | FunFam | Ankyrin repeat-containing protein ITN1 | 223 | 343 | - | - | |
| Pste5g01729 | 584 | ProSiteProfiles | Ankyrin repeat region circular profile. | 298 | 327 | - | - | |
| Pste5g01729 | 584 | MobiDBLite | consensus disorder prediction | 560 | 579 | - | - | |
| Pste5g01729 | 584 | FunFam | Ankyrin repeat-containing protein ITN1 | 51 | 188 | - | - | |
| Pste5g01729 | 584 | PANTHER | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT | 50 | 566 | - | - | |
| Pste5g01729 | 584 | Pfam | Ankyrin repeats (3 copies) | 197 | 255 | IPR002110 | GO:0005515 | |
| Pste5g01729 | 584 | Pfam | Ankyrin repeats (3 copies) | 80 | 185 | IPR002110 | GO:0005515 | |
| Pste5g01729 | 584 | Pfam | Ankyrin repeats (3 copies) | 262 | 327 | IPR002110 | GO:0005515 | |
| Pste5g01729 | 584 | SUPERFAMILY | Ankyrin repeat | 80 | 360 | IPR036770 | - | |
| Pste5g01729 | 584 | SMART | ANK_2a | 230 | 259 | IPR002110 | GO:0005515 | |
| Pste5g01729 | 584 | SMART | ANK_2a | 298 | 328 | IPR002110 | GO:0005515 | |
| Pste5g01729 | 584 | SMART | ANK_2a | 196 | 225 | IPR002110 | GO:0005515 | |
| Pste5g01729 | 584 | SMART | ANK_2a | 162 | 191 | IPR002110 | GO:0005515 | |
| Pste5g01729 | 584 | SMART | ANK_2a | 75 | 104 | IPR002110 | GO:0005515 | |
| Pste5g01729 | 584 | SMART | ANK_2a | 127 | 156 | IPR002110 | GO:0005515 | |
| Pste5g01729 | 584 | SMART | ANK_2a | 264 | 293 | IPR002110 | GO:0005515 | |
| Pste5g01729 | 584 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Pste5g01729 | 584 | ProSiteProfiles | Ankyrin repeat profile. | 298 | 331 | IPR002110 | GO:0005515 | |
| Pste5g01729 | 584 | ProSiteProfiles | Ankyrin repeat region circular profile. | 162 | 185 | - | - | |
| Pste5g01729 | 584 | ProSiteProfiles | Ankyrin repeat profile. | 162 | 185 | IPR002110 | GO:0005515 | |
| Pste5g01729 | 584 | MobiDBLite | consensus disorder prediction | 39 | 65 | - | - | |
| Pste5g01729 | 584 | Gene3D | - | 219 | 288 | IPR036770 | - | |
| Pste5g01729 | 584 | MobiDBLite | consensus disorder prediction | 39 | 58 | - | - | |
| Pste5g01729 | 584 | ProSiteProfiles | Ankyrin repeat profile. | 230 | 262 | IPR002110 | GO:0005515 | |
| Pste5g01729 | 584 | Pfam | Domain of unknown function | 414 | 518 | IPR026961 | - | |
| Pste5g01729 | 584 | Gene3D | - | 43 | 218 | IPR036770 | - | |
| Pste5g01729 | 584 | ProSiteProfiles | Ankyrin repeat region circular profile. | 230 | 251 | - | - | |
| Pste5g01729 | 584 | Gene3D | - | 289 | 396 | IPR036770 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste5g01729 | Pste-Chr5 | 10981781 | 10984579 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste5g01729 | 11 | 584 | Miscellaneous Gene Families | AT3G09550 | 69.514 | 0.0 | 797 |