LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste5g01719	ATGAGAAAACTGTGCTTTAACCCCAAGACACCATCGTTTGCGTTGGCCCGCACTTCTCCTTCCTCGCCACTATCCTTAACCTCAAGCCCAACGCCTCTCAGGCTGAGCTTTTCCGAACCTAGCAGCTTCGAAGAAGATAGCTTCTTGGACGAAGCTGAGGCACTGATAATGAAATGGAATTTAGACACCTCTGCTTATGCAAAAGTCACTTCCCTTTTCTACCAGGACAAAACAGAAGCCAAACACTACATTAACTGTGTTAACCAGCTTCAGAAAACCATGCATTCCTTGCTCTCGCAGAACCCTTCCTCCGAGAAACTCATCCTCGCTCATAACCTTATGCAGATAGCAATGAAGAAACTCAAGAAAGAGTTCTACCAGATCTTATCCATGAACCGCGCTCACCTTGATCCGGAATCAGTCTCCGCCAGATCCTGTCGCACCTCCGCCAACTCCAGCTCCTCCGATTACGAAGACGACTTCGCCGCGGAGGACGACGATATTCGTGCAGCCAGTGACTCTATCTCCGAAGTTGAGCAGGTTTCTTCCGGCGCCATGGCGGATCTGAAACTAATAGCCGATTGTATGGTATCATCCGGTTATGCGAAAGAATGTGTTAGCGTTTACACCATCATCCGAAAATCCATCATAGACGAAGGAGTCTACCGCCTTGGCGTGGAGAAACTGAGCTCCTCCCGCGCTAACAAGATGGAATGGGAAGTGCTTGATTTGAAAATCAAGAGTTGGTTAGAGGCAATAAGGATTTCCGTTAGAACCCTATTCAACGGAGAGAGAATCCTCTGTGATCACGTTTTCAGTTACTCAGATTCCGTCAGAGAATCCTGCTTCGCCGAGATTTCAAGAGACGGTGCCTCTCTCCTTTTTGGCTTCCCCGAACTCATTGCCAAAACAAAGAAATCATCGCCGGAGAAGCTGTTCCGTGTACTCGATATGCATGCTGTGGTTTCCGAACTGTTCCCGGAGATCGAGTCCATCTTCTCCTCCGATTACACCTCTGCTGTTCGTGCTCAAGTCCTCGCTTCGCATCAACGACTCACCGAGACAGCGCAAAACTTGCTCATGGAGTTCGAGTCCGCGATACAGAAAGACTCTTCCAAGTCGGCGGTGAACGCCGGCGGTGTGCACTCGCTCACCATTCAGACAATGAATTACATCTCTGTCCTCGCCGATTACGTCAACGTGCTTACTGACATATTCCCGAGCTCCGACTGGCTTCAGTCGCCGAAGAAGTCATCGCTGCCGGAGTTTTATTTATACAGTCCGGAATCTGATTACTCAGCGTCGACGCCGGCGCTAACGGTGCGTTTTGCGTGGCTGATTCTAGTCCTCCTGTGCAAGCTGGACGGCAAAGCGAAGCATTGCAAGGACGTTTCACTGTCTTACCTGTTTCTCGCGAACAACCTCTGGTACGTGGTGGCCAGAGTCCGAAGGTCGAACCTGCAGTACGTGCTTGGCGACGATTGGATCACAAAGCACGAAGCTAAAGCGAAAAGGTTCGTTGCGAACTACGAGAAGGTGGCATGGGGAGAAGTGGTATCGTCGTTGCCGGAAAATCCAGCTACGGCGGAGGCGAGGGCGGTGTTCGAGAACTTCAACCTCAGATTCGAGGAAGCGTATCGGAAACAGAACTCCTTCGTGGTTGCTGACCGAGAATTACGTGACGAAATAAAAGGTTCGATCGCGAGAAGTATAGTGCCGAGATATCGCGAGTGGTATAATGCCCTACTTGCTACGGTGGGATCGGTGAGGAACTTGACAGTGACGGAGTATGTCACGTTTACCCCCGAGGATATTGAAAATTACCTGGCTAACCTCTTCTTTTTTGGTACGTCTCCCAGCGCTGTATCCTCTTTGTCGTTAACGTCATCACCTCTCCGGCGTTGGAGTTAA	1911	0.5018	MRKLCFNPKTPSFALARTSPSSPLSLTSSPTPLRLSFSEPSSFEEDSFLDEAEALIMKWNLDTSAYAKVTSLFYQDKTEAKHYINCVNQLQKTMHSLLSQNPSSEKLILAHNLMQIAMKKLKKEFYQILSMNRAHLDPESVSARSCRTSANSSSSDYEDDFAAEDDDIRAASDSISEVEQVSSGAMADLKLIADCMVSSGYAKECVSVYTIIRKSIIDEGVYRLGVEKLSSSRANKMEWEVLDLKIKSWLEAIRISVRTLFNGERILCDHVFSYSDSVRESCFAEISRDGASLLFGFPELIAKTKKSSPEKLFRVLDMHAVVSELFPEIESIFSSDYTSAVRAQVLASHQRLTETAQNLLMEFESAIQKDSSKSAVNAGGVHSLTIQTMNYISVLADYVNVLTDIFPSSDWLQSPKKSSLPEFYLYSPESDYSASTPALTVRFAWLILVLLCKLDGKAKHCKDVSLSYLFLANNLWYVVARVRRSNLQYVLGDDWITKHEAKAKRFVANYEKVAWGEVVSSLPENPATAEARAVFENFNLRFEEAYRKQNSFVVADRELRDEIKGSIARSIVPRYREWYNALLATVGSVRNLTVTEYVTFTPEDIENYLANLFFFGTSPSAVSSLSLTSSPLRRWS	636

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste5g01719	636	SUPERFAMILY	Cullin repeat-like	77	613	IPR016159	-
	Pste5g01719	636	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	45	613	IPR004140	GO:0000145\|GO:0006887
	Pste5g01719	636	Pfam	Exo70 exocyst complex subunit	247	610	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Pste5g01719	636	Gene3D	Exocyst complex component Exo70	58	618	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste5g01719	Pste-Chr5	10902876	10904786	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste5g01719	49	613	EXO70 exocyst subunit family	AT3G09520	54.688	0.0	606