Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01716 AAGGAGAGAGTGAGTAGAATTAGAATTAGGAGGAGAGAAGAGAAAGAAAAGAAAGGTAAGGGGAGAAGGGAGAAGGGAGAAGGCGAAGCATGAAAATCTGGTCCTGGGAGACAGCAACAAGAAGAACAAGAGAATCAGAATCAGAATCAAGTTCTGCTCCGCCACCACAACAATTGCTCCCACGACGTCGTTTCCCACTCCACTACACTTGAATGAATGGGCAACTGCGGAACCAGAGAGGAATCTGCTGTAGTCTCCAACGCTCAAGTTCAGCAGCTTCACCATGCGACGTCGTTGGGCGCCAGTGCGAGGAGCCAGAATGCGGCTAGCGAGAAGAAGCACGGTCACAGGCACAATCTGAGCGAGTGCGCTTCGGATCTGAGCGAGTCCTGTTCCACACCGCGCGGTAACAATAGCAGCGCCGCAACCGCCAGCAACACGCTCCTCTACACGCACGTCATCGCCTTCACGCTCTACGAGTTGGAAACCATAACCAAGAGCTTCCGCGGAGACTATATCCTCGGCGAAGGAGGCTTCGGAACCGTTTACAAAGGCTACATTGATGAGAATGTCAGAGTTGGACTCAAATCGCTTCCTGTAGCGGTTAAGGTTCTCAACAAGGAAGGATTACAGGGACATCGAGAGTGGCTTACGGAGGTCAATTTTCTAGGTCAACTTAGGCATCCTAATCTGGTGAAGTTGATTGGTTACTGCTGTGAAGATGATCATAGACTTCTTGTGTATGAGTTCATGTTCCGAGGGAGTTTGGAAAATCACCTTTTCCGAAAGACAACTGTCCCTTTATCATGGGCCACAAGAATGATGATTGCTCTTGGAGCAGCCAAAGGACTTGCCTTTCTCCACAATGCTGAAAGACCTGTAATCTATCGTGATTTCAAAACGGCTAATATATTATTGGACTCCGACTATACAGCCAAACTTTCTGATTTTGGATTAGCTAAAGCAGGACCACAAGGTGATGAAACCCATGTATCCACCCGAGTCATGGGTACATATGGTTATGCTGCCCCTGAATATGTAATGACTGGCCACCTGACGGCTAGGAGTGACGTCTATAGCTTTGGCGTTGTTCTTTTGGAGCTTTTAACGGGTAGGAAATCTGTAGACAAGACAAGACCTGGAAAGGAACAGAGCTTGGTAGATTGGGCACGGCCGAAGCTCAATGACAAGAGAAAGCTCCTACAAATAATTGATCCTAGATTGGAGAATCAATACTCAGTAAGGGCAGCACAAAAAGCATGTAGCTTGGCTTATTACTGTCTGAGTCAAAATCCCAAAGCAAGGCCACTAATGAGCGATGTAGTTGAGACATTGGAACCCTTACAAAGTTCAAGTGTTGGTCCAGGAGAAGTTTCATTATCTGGATCAAATAGTGGGAGTGCTGGGCCATTTGCCATGAATAAAATCTCTGACTACCGGATGCGTCAAAGGTTTTCAAACAATGTTGGTCCTGGTGCTGTATGTCGATCTCCAAACCCAAATTGCTCACCAAGTCCCCCAACAGCTTTACGGGTCAGATGAGAAACTCATACCATGAATCCCTGTCTGGTGTGCTTCTCGAATCTCCACTTAATATCAAGAAATAGTGTTTGTTGTTAAAAATGTGGGTGCATCCTTGTATTTGCTGCTTTGTACATGATATGATAATATGGTGACAAGAGGCCCCGGTGGATAATTTTTGTATCAATGTTTGGTCTTCTGTTCATCTGGGTGGGAATTATTGTGTGGAAAATGGAAATCTGTGTCTTTTAATCATCGTGGCAGCAGAACTAATATAACTGGCTCCTCACATCAGAGTAAGACGACCCGAACACGCAAGTACCTAATGATGTATTTTATTTTATTTGAGATTATTAGGTAAACTGAGGGTAGTATAAGACAATCTTAGTTAACATTTCTATGTCATGCCCGGTTAGATTGTCTGCTTTTTGAAGTGACCAATTAATATTTATAAAAAATAAAGATGGAGGGTCATTTTCAAGTCTTTTAAGGTTTTTGTAAGTTTCCTAGTTTGAAGTCTCGTAAGTTGCTC 2053 0.4447 MGNCGTREESAVVSNAQVQQLHHATSLGASARSQNAASEKKHGHRHNLSECASDLSESCSTPRGNNSSAATASNTLLYTHVIAFTLYELETITKSFRGDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKTTVPLSWATRMMIALGAAKGLAFLHNAERPVIYRDFKTANILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPGKEQSLVDWARPKLNDKRKLLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSSVGPGEVSLSGSNSGSAGPFAMNKISDYRMRQRFSNNVGPGAVCRSPNPNCSPSPPTALRVR 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01716 441 SUPERFAMILY Protein kinase-like (PK-like) 72 374 IPR011009 -
Pste5g01716 441 PANTHER OS01G0588500 PROTEIN-RELATED 58 377 - -
Pste5g01716 441 Gene3D Phosphorylase Kinase; domain 1 57 178 - -
Pste5g01716 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Pste5g01716 441 Pfam Protein tyrosine and serine/threonine kinase 101 373 IPR001245 GO:0004672|GO:0006468
Pste5g01716 441 MobiDBLite consensus disorder prediction 26 49 - -
Pste5g01716 441 FunFam Probable serine/threonine-protein kinase PBL8 179 389 - -
Pste5g01716 441 FunFam Serine/threonine-protein kinase BIK1 63 178 - -
Pste5g01716 441 CDD STKc_IRAK 102 376 - -
Pste5g01716 441 ProSiteProfiles Protein kinase domain profile. 96 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01716 441 ProSitePatterns Protein kinases ATP-binding region signature. 102 131 IPR017441 GO:0005524
Pste5g01716 441 MobiDBLite consensus disorder prediction 418 441 - -
Pste5g01716 441 Gene3D Transferase(Phosphotransferase) domain 1 179 383 - -
Pste5g01716 441 MobiDBLite consensus disorder prediction 376 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01716 Pste-Chr5 10883038 10886803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01716 84 373 Glycoside Hydrolase AT3G07070 55.631 2.38e-109 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste5g01716 PK_Tyr_Ser-Thr 5.2e-48 CL0016