Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01712 ATGGCTGCTTGTGCTTTATTCAGTGGTGGCGGTAATATTACCGAAGATGGCAATGTTAACAACGGAGGAAGTGGAAGCGCTACTAGTACTCCTTTGACTAGTGCCTCTAACTCTAGCAACATGAGCAACGAAGACCAACACAACCTACATGGCATCATGCCACAACCTCATTGTGAGAGAAAAATGGTGAGAAAAAGAATGGCTTCTGAGATGGAAGTTAACATTCATGCCACCCCACCCCACAACTCTTCCTCCACAACTGATTATCCTAGGTTTCCTCGTCGAAACAACACCAGCATCAACATGTTAGAAAAAGGGTCCACCACCACCACAACAACTAACAATAGTAATAGTGGTAATATTTCATCAAGAGATAACGTTGCTATTCCAAATTACCCCACCGTGACGGTCACAACCAACTACTCCACTATGTTGCTACCTTCTTCCACCACCATCAATTCCTCTGGTGTTGCTCCAAACTACACTGCTCACCAACACCATCATTTCCAAGGACTCGTCGAAAGTCAGGACCAGCAAAACCCCGTGCCTGCAGTGTGTGGATTCTCAGGGTTACCACTTTTTCCATCTCAAAGCCAAAGAAACCGGGACAACACTGCCAACATAAGAAACAGTGGTGGAAATATTGTTGACGTGGTTGCTTCTTCTTCTCCTTCCATGGACGACACTTCAGCCGCAACAAGTGGTTGGATAGACGGTATATTGAAGGATCTCATTCACAGTTCAAACAGTGTTTCGATTCCTCAACTAATCAGCAACGTGAGGGAGATTATATACCCTTGCAACCCCAACCTTGCAATGGTTCTTGAATACAGGCTGCGCCTTCTTCTCACTGATTCTACCCCACAAAACAAAAGAGGCACGGAAGGGGTGCATCTTCCTCCTTCCGTGTCCTCGGTTAAGCTCGTGAATAATCGTGTGGATGGCATTCTTCCTAATTTGCACTTCACAGATGCTTCAGGTGGTGCTGTGGTTGTGAATCAGCACATGTTGTCCAATTGGGGTGTGCCTCCAATCACTCAACACCATGATAACACCAACAATACAACCAACACCAGCAATAACCCTTCAGTTTCTTTGGTTACTTTGCCTTCACCAACACCACCACTAGCACCTCATTATTCACCGTCACAAGAGAAGCAGCCTCAAGAGGAAGATCTTGGAGCTACCAGTAGTGCCGAGGTGCCACTTTCAAGGAAGAAGAAAGAGGAGTTGCGGGAACAGAAGAAAAAAGACGAGGAGGGTTTGCATCTCCTCACTTTGCTACTTCAGTGTGCAGAAGCTGTTTCAGCTGAGAATCTTGAAGATGCAAACAAGATGTTGCTGGAGATTTCTCAATTGTCAACACCGTTTGGCACTTCAGCACAGCGTGTGGCAGCTTATTTCTCGGAAGCCATATCAGCAAGGTTGGTGAGTTCATGTTTGGGGATATATGCCACTTTGCCCCACACTCATCAAAGCCACAAGGTGGCATCGGCTTTCCAAGTGTTCAACGGTATCAGTCCTTTCGTGAAGTTCTCACACTTCACAGCGAACCAAGCAATCCAAGAAGCTTTTGAAAGGGAAGAGAGAGTGCATATCATAGATCTGGACATAATGCAAGGGTTGCAATGGCCCGGTTTGTTTCACATTCTAGCTTCAAGACCTGGTGGAGCCCCTTATGTGAGGCTCACGGGGCTTGGTACCTCAATGGAAACACTTGAAGCCACGGGTAAACGTTTGTCAGATTTTGCAAACAAACTTGGCCTTCCCTTTGAGTTCTTCCCCGTGGCTGAGAAAGTTGGGAACCTTGACCCTGAGAGGCTCAACGTAAGCAAAACCGAAGCTGTTGCTGTTCACTGGTTGCAACATTCCCTCTATGATGTCACAGGCTCAGACACCAACACCTTGTGGCTCTTGCAAAGGCTGGCACCTAAAGTGGTGACTGTGGTAGAGCAGGACTTAAGCAACACTGGTTCATTCTTGGGGAGATTTGTTGAAGCCATACACTACTACTCAGCATTATTTGACTCTCTTGGGTCTAGCTATGGGGAGGAGAGTGAGGAGAGGCATGTGGTGGAACAGCAGCTATTGTCTAGGGAGATTCGCAATGTGCTAGCTGTTGGGGGGCCGTCAAGGACTGGAGAACCAAAGTTTCACAACTGGAGGGAAAAGCTTCAGCAATGTGGGTTTAGAGGTATATCTCTAGCTGGTAATGCTGCCACTCAAGCTAGTCTACTCCTTGGTATGTTCCCATCTGAGGGCTATACCTTGGTGGAGGACAATGGCATCCTTAAACTTGGTTGGAAGGACCTTTGCTTGCTCACTGCTTCAGCTTGGAGACCTCCCTACCATAGTGGCACTGCCATTACCCATCACAACTAGGCTTTTGTGTTGGCCTTTTCATCATCTCATTATAAAACTATGTAGCATCCACCTCTTTGTTACTTAATTTAGAGAGAGATTGTTAGGTGATCCCAAAGCATGTGATTTTTCTTGCCTAATGTGTACCACTTCAGCAGTAACATAAAAAAAGAAAAAAAGATAGTTAAAATAGGAAACAGTGATGACCAAATGGTTGAAGGGGTACCCCACGATTGACATAAAGCAAG 2609 0.4611 MAACALFSGGGNITEDGNVNNGGSGSATSTPLTSASNSSNMSNEDQHNLHGIMPQPHCERKMVRKRMASEMEVNIHATPPHNSSSTTDYPRFPRRNNTSINMLEKGSTTTTTTNNSNSGNISSRDNVAIPNYPTVTVTTNYSTMLLPSSTTINSSGVAPNYTAHQHHHFQGLVESQDQQNPVPAVCGFSGLPLFPSQSQRNRDNTANIRNSGGNIVDVVASSSPSMDDTSAATSGWIDGILKDLIHSSNSVSIPQLISNVREIIYPCNPNLAMVLEYRLRLLLTDSTPQNKRGTEGVHLPPSVSSVKLVNNRVDGILPNLHFTDASGGAVVVNQHMLSNWGVPPITQHHDNTNNTTNTSNNPSVSLVTLPSPTPPLAPHYSPSQEKQPQEEDLGATSSAEVPLSRKKKEELREQKKKDEEGLHLLTLLLQCAEAVSAENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPHTHQSHKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGAPYVRLTGLGTSMETLEATGKRLSDFANKLGLPFEFFPVAEKVGNLDPERLNVSKTEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNTGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEPKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPYHSGTAITHHN 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01712 793 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 387 775 IPR005202 -
Pste5g01712 793 MobiDBLite consensus disorder prediction 13 49 - -
Pste5g01712 793 MobiDBLite consensus disorder prediction 76 125 - -
Pste5g01712 793 MobiDBLite consensus disorder prediction 6 56 - -
Pste5g01712 793 MobiDBLite consensus disorder prediction 342 367 - -
Pste5g01712 793 ProSiteProfiles GRAS family profile. 415 780 IPR005202 -
Pste5g01712 793 MobiDBLite consensus disorder prediction 402 416 - -
Pste5g01712 793 MobiDBLite consensus disorder prediction 74 125 - -
Pste5g01712 793 Pfam GRAS domain family 425 780 IPR005202 -
Pste5g01712 793 MobiDBLite consensus disorder prediction 342 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01712 Pste-Chr5 10848208 10851470 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01712 383 781 GRAS Transcription Factor Family AT3G54220 81.373 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste5g01712 GRAS 7.8e-124 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00774 6 2968225 2970290 Pste5g01712 5 10848208 10851470 PCT