Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01696 TTTCAATTCAAGCAGCTTTAGAAAACCCAACCAGCCAACAGTTTTCACTTTCTAGGTTGAGTGAGCAAGTTAAGTTCTTGAGAGCTGAAAAAAAATCTTAATACAAGATTACAGCTTCAGAAGAGTCCTGCTGAAGTGTGGGGAATCCTTGTGACAGATGTTGGTTTGATAGTGACTTAAGAGGCACTAATTTGATACATGCATGGAAGGAAGAGAAGGAATCAGTTCTGGGGTCACAGTGATAGGGGCAGAAACTCCGTCAGTATATCACATGGCCCCAAGAAGTGAAGCTCCAAGTCAGGGTCCTCCTGTTCCTGAAGCAACAGTTGGAGCTATTGTTGTGTCACCAGTGAGTGTGGGATTGGATGGAACAACAGCTAAGAAGAAAAGGGGTAGACCAAGGAAATATGGGCCAGATGGGTTGAACTCTATGGCCTTGTCACCAATGCCAGTCTCATCTTCAGCTCCATTTTCTAATGACTTTTCATCTGGGAAGCGAGGGAAACCGCGAGGCATGGAGTACAAGCTGCCAAAAAAAGCTGGAGTGGATCAATTTGGTGACTCTGTTGGTACTAACTTTATGCCTCATATCATTACTGTCAATACTGGCGAGGACATTACAATGAAGGTTATATCTTTTTCCCAACAAGGACCCCGTGCTATATGCATCCTATCTGCTAGTGGTGTAATTTCAAATGTTACACTACGTCAGCCTGATTCTTCCGGGGGAACTTTGACCTATGAGGGCCGTTTTGAGATACTTTCATTGTCTGGATCATTCATGCCTACTGACAACCAAGGAACAAGAAGCAGGTCCGGTGGGATGAGTGTTTCATTGTCAAGTCCAGATGGTCGCGTTGTAGGTGGTGGAGTAGCTGGTCTCCTTGTAGCTGCCAGTCCTGTACAGGTGGTAGTGGGAAGCTTTTTGCCAAACAACCAACAAGATCAGAAACCAAAGAAGCCCAAGTCTGATTATGCACAAGCTAATGTCACCCCTGGCATTGCAGTGTCTTCTGCACCACACCCTACCAATGGTGAAAAGGAGGATATCATGGGTGGACACCTACTGCACAACTCAGGGACAACTTTTAACTCAAACCTTACTCCTCCCTCGGCCTTTCGACGAGAAAACTGGGTTAACATGCACTCCATGACAGACAACATGAAGTCGGCTACTGACATTAACATATCTCTTCCTGATAGTTGTTAA 1210 0.4521 MEGREGISSGVTVIGAETPSVYHMAPRSEAPSQGPPVPEATVGAIVVSPVSVGLDGTTAKKKRGRPRKYGPDGLNSMALSPMPVSSSAPFSNDFSSGKRGKPRGMEYKLPKKAGVDQFGDSVGTNFMPHIITVNTGEDITMKVISFSQQGPRAICILSASGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLSSPDGRVVGGGVAGLLVAASPVQVVVGSFLPNNQQDQKPKKPKSDYAQANVTPGIAVSSAPHPTNGEKEDIMGGHLLHNSGTTFNSNLTPPSAFRRENWVNMHSMTDNMKSATDINISLPDSC 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01696 335 ProSiteProfiles PPC domain profile profile. 123 264 IPR005175 -
Pste5g01696 335 Gene3D - 128 264 - -
Pste5g01696 335 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 29 307 IPR039605 GO:0003680
Pste5g01696 335 FunFam AT-hook motif nuclear-localized protein 1-like 128 260 - -
Pste5g01696 335 CDD DUF296 128 218 IPR005175 -
Pste5g01696 335 Pfam Plants and Prokaryotes Conserved (PCC) domain 128 241 IPR005175 -
Pste5g01696 335 MobiDBLite consensus disorder prediction 55 78 - -
Pste5g01696 335 MobiDBLite consensus disorder prediction 267 302 - -
Pste5g01696 335 SUPERFAMILY AF0104/ALDC/Ptd012-like 126 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01696 Pste-Chr5 10748434 10753009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01696 10 272 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 56.376 4.78e-96 287
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01696 5 10748434 10753009 Pste5g01696 5 10748434 10753009 ECH
Pste5g01696 5 10748434 10753009 Pste6g02396 6 11742033 11750589 PCT