Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01691 ATGTCTCAGACAGAGAAGGATCCAGGGATTAAGCTGTTTGGAAGGAAGATTCCGGTGCCGGAATGTCAGATTCCGGCCAACTCTGGACCCATGGATGCGTGCAGCAGCATAAAGAAAACAGAACTGGAAATACCTAGTGAATGTGGAGAAAACACTGAGCATCAAGAAAATTCTTCTGATTCAAGAGATAGTAAACAGGAGTCCCAACATAAAATGGTACAGGAAAATGATCCAATAGTAAATTCCAAGCATGTGGAAGATACTGCAGAGACCGGGAATTCAGATCAAGATAAAGTCTTAAAGAAACCTGACAAGATTCTTCAGTGTCCAAGATGCAACAGTTTGGACACCAAGTTTTGCTATTTTAATAACTACAATGTTAATCAACCTCGGCATTTCTGCAAGAACTGCCAAAGGTATTGGACAGCTGGTGGAACAATGAGAAATGTTCCCATAGGTGCTGGGAGACGGAAGAATAAGCATCTAGCCTCTCAATACCGACACATTATAGTAACCTCTGATGGCATTCCAACATCCAGGCTAGAAACTACAGACTCATCTGGTCAGCACCAGCAACATATCTCAAGTCTTGAATCCTCAGTTCCTTTCAGGTCTTCAACAGACAATGGCACTGTATTGAAATTTGGTCCAGACACCCCTCTTTGTGAATCCATGGATTCAATGCTTAATCTTAGAGAACAGAAAAGATATGTTGATGCTAGTTCCATCAGTTGTGTAGATTATGGAGGCGAATCATCGATATGTGGATCTTCCATGACGAATATTGGTACTCAAGGAAATGAATCATCTGAGCATAATACATCAAATTGGTTACAATATTATCCCATACCCCCGTGGGCATTACCTTATCCAGGTTGGAATAATAATGTAAATTCTATGGGGGCAGTTCATCAATCTTCAGCACCAATTTGTACCCCATATAATAACACTGGTCCTGCAGCAATGCAATGGTGTCCTACTCCAATGGTTGCAATTCCTGGCATGTGCAGACCAAGCATTCCTTTGCAATTTGTACCACCATCATACTGGAGTGGAACACCACTTTGGAATGCTGGAACTGGGACAGTGTCAATAGGATCCAATGCTTGCCTTTCGCCGTCTTCTTCCACGAGTAACAGTTGCTGCTCAGGCAATGGCTCTCCAACACTTGGAAAGCACACTAGAGATACAATTTGCACTGATGAAGAGAAACTAGAGAAGTGTGTTTTGGTTCCAAAGACCATTAGAATTGAAACCTCAAATGAGGCCTCAAGAAGTCCTGTAAGGGCTACATTAGTTGTTATGCCTGATAAGCAGCTGTCTGTATCAAATGGGGATACTTTGAAAACAATTGAACCAAAAGAAGGCAATGATCGTGTGTTGGGTGCCTCTCAAATCTTGGAAGCCAATCCTGCAGCTATTTCTCGTGCTCATGCATTTCAGGAGAGCATATAG 1455 0.4227 MSQTEKDPGIKLFGRKIPVPECQIPANSGPMDACSSIKKTELEIPSECGENTEHQENSSDSRDSKQESQHKMVQENDPIVNSKHVEDTAETGNSDQDKVLKKPDKILQCPRCNSLDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPIGAGRRKNKHLASQYRHIIVTSDGIPTSRLETTDSSGQHQQHISSLESSVPFRSSTDNGTVLKFGPDTPLCESMDSMLNLREQKRYVDASSISCVDYGGESSICGSSMTNIGTQGNESSEHNTSNWLQYYPIPPWALPYPGWNNNVNSMGAVHQSSAPICTPYNNTGPAAMQWCPTPMVAIPGMCRPSIPLQFVPPSYWSGTPLWNAGTGTVSIGSNACLSPSSSTSNSCCSGNGSPTLGKHTRDTICTDEEKLEKCVLVPKTIRIETSNEASRSPVRATLVVMPDKQLSVSNGDTLKTIEPKEGNDRVLGASQILEANPAAISRAHAFQESI 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01691 484 PANTHER CYCLIC DOF FACTOR 2 1 483 IPR045174 GO:0003700|GO:0006355
Pste5g01691 484 Pfam Dof domain, zinc finger 104 161 IPR003851 GO:0003677|GO:0006355
Pste5g01691 484 ProSiteProfiles Zinc finger Dof-type profile. 107 161 IPR003851 GO:0003677|GO:0006355
Pste5g01691 484 ProSitePatterns Zinc finger Dof-type signature. 109 145 IPR003851 GO:0003677|GO:0006355
Pste5g01691 484 MobiDBLite consensus disorder prediction 45 99 - -
Pste5g01691 484 MobiDBLite consensus disorder prediction 45 72 - -
Pste5g01691 484 MobiDBLite consensus disorder prediction 80 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01691 Pste-Chr5 10704600 10707066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01691 7 483 C2C2-Dof Transcription Factor Family AT5G39660 31.273 3.04e-62 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pste5g01691 zf-Dof 3e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01691 5 10704600 10707066 Pste5g01691 5 10704600 10707066 ECH