LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste5g01690	ATGAAGATGATGATTCTCTTCTTTTTCTTCATACTTCCTTTGGCGTTGGCAGATTTGAAGGTTGGATTCTATGGCTCCTCGTGCCCAAAAGCGGAGTCCATAGTGCAGAAAGCCGGTTGTGATGCGTCCATACTCATAAATTCTACCAAGTCCAACACAGCAGAAAAAGATTCAGGAGCAAACGACAGTGTCCGTGGCTATGATCTCATTGATGAAGTGAAACAAACCCTCGAAGATGCATGCCCTTCAACCGTGTCATGTGCAGATATCATAACCCTAGCTACTCGAGATGCTGTGGCCTTATCTGGAGGACCCAAATACGATGTTCCCACAGGAAGACGTGATGGATTAGTCTCTAACATCAACAATGTTAATATTCCAGGACCCAACAGTCTAGTGTCAGTAATATCTCAGTTTTTTGAGAAGAACTTAGGCCTAACAACACAAGAAATGGTGACCCTTTTTGGAGCACACACTGTTGGTGTTGCACACTGCAGTTTCTTTGCTAATAGACTCTCGAGTTCTGGGGGGAAACCTGACCCGACAATGGACCCTGCCTTGAGTGCTAAGTTGGTGAAGTTGTGTAGTAGTTCAAGAGATGATCCAGCTACCCCTTTGGACCAGAAGACTTCTTTTCTTGTTGATAATGAGTTCTACAAGCAGATTCTTGCGAAGAAAGGGGTGTTGCAGATTGATCAACAACTTGCCCTGGATACAAATACCAAAGGGTTTGTGTCAGATTTTGCTTCAAATGAGGATAGGTTTCAAAAGGGTTTTGCAAATGCGATGGTTAAGATGGGGAAGATTGATGTTCTGATTGGGAATCAAGGAGAAATTCGCAAGAAATGTTCAATTTTCAATAACCGCAACTAG	873	0.4318	MKMMILFFFFILPLALADLKVGFYGSSCPKAESIVQKAGCDASILINSTKSNTAEKDSGANDSVRGYDLIDEVKQTLEDACPSTVSCADIITLATRDAVALSGGPKYDVPTGRRDGLVSNINNVNIPGPNSLVSVISQFFEKNLGLTTQEMVTLFGAHTVGVAHCSFFANRLSSSGGKPDPTMDPALSAKLVKLCSSSRDDPATPLDQKTSFLVDNEFYKQILAKKGVLQIDQQLALDTNTKGFVSDFASNEDRFQKGFANAMVKMGKIDVLIGNQGEIRKKCSIFNNRN	290

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste5g01690	290	SUPERFAMILY	Heme-dependent peroxidases	18	287	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Pste5g01690	290	FunFam	Peroxidase	127	266	-	-
	Pste5g01690	290	PRINTS	Plant peroxidase signature	205	220	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pste5g01690	290	PRINTS	Plant peroxidase signature	28	47	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pste5g01690	290	PRINTS	Plant peroxidase signature	261	274	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pste5g01690	290	PRINTS	Plant peroxidase signature	221	238	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pste5g01690	290	Gene3D	-	39	287	-	-
	Pste5g01690	290	PANTHER	-	38	287	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pste5g01690	290	CDD	secretory_peroxidase	19	284	IPR033905	GO:0004601\|GO:0042744
	Pste5g01690	290	ProSiteProfiles	Plant heme peroxidase family profile.	39	287	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste5g01690	Pste-Chr5	10689989	10692948	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste5g01690	4	288	Peroxidase	AT4G26010	51.282	2.22e-104	306

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