Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01687 GGTACCTGGGTTAGCCACTGGCCACCTCTCGGACTCCAAAGGCTCCTCGGATTTGAAAAATTGACGAAAATAAAAACAAAATAGTGTAGCTAAGGATTAAGTAGGGTGCAGAGAATAACAAACCATTTGTGGTAGGACCCACATTCTAACCATGGGTCAGCAACGTTCTCTATTCGGTTAACCACGGTTAAGCTCTGCGCCTTCTCTTTCTCTTTCTCTCTCCATCCTCCTCCTCCTCCCTCTCCCCTTCGGTTTCAGCTTCAGATCTCATCAGCTCCAACATTAGGGTTTCAAATTGGGAAAATATTCCCCCAATTCGGTCCTTTTGATCCCAGCTTAATCTCCGATGCATTGAATTCAATAAGACATATCCCTCCATGCATCGTTACGAGAGCTTTGTGCACAGATAAATGGAGACTCAGCGAATTATCGAGTTTCCGCATAGGAACATGGACAAGAGGCCAAGGAAGAAGCGTCGTTTAACATGGGACATGCCTCCTCCTCCTCCACCTCTTCCTCCTCCCCAGTTGCAGGTTCTTCCTACAGTGTATTGTACCCAGGAGGTTGGGAATGGAGTGGTTCCAAATCATGCCTATCCACCTGTGTTTTATAGGGGAATTCCTCGCAATGGATCACCCCCGTGGAGGCCTGATGATAAAGACGGTCACTATGTTTTTGCTGTCGGTGAAAATCTAACTCCTAGATACAAAATTCTCAGTAAAATGGGTGAAGGAACTTTTGGCCAAGTGTTGGAATGTTTTGACGATGAAAAGAAAGAAGTTGTGGCAATTAAAATTGTTCGCTCCATAAATAAGTACCGTGAGGCTGCAATGACTGAAATTGAGGTCTTGCTGAGGCTAGCCAGTCATGATGTTGATGGTGCACGTTGTGTGCAAATACGGAATTGGTTTGACTATCGTAATCATATTTGTATTGTATTTGAGAAGCTTGGACCAAGCTTATATGATTTTCTCCGCAAAAACAGCTATCGTTCTTTTCCTATTGATCTTGTTCGGGAGTTTGGCAGACAACTTTTGGAGTCTGTAGCATTTATGCATGATTTATGCTTGATTCACACGGATTTGAAGCCAGAGAATATTCTTCTTGTCTCATCAGAATTCATTAAAGTGCCAGACTATAAGTTTCTATCTCGGACAACAAAAGATGGCTCCTACTTCAAGAATCTACCCAAGTCAAGTGCCATTAAGCTCATTGATTTTGGGAGTACAACGTTTGAACATCAGGATCACAATTATGTTGTTTCAACAAGACATTATCGTGCGCCAGAAGTTATCTTAGGTCTTGGGTGGAACTATCCTTGTGATCTTTGGAGTGTGGGCTGCATATTGGTTGAACTTTGCTCTGGAGAGGCACTTTTCCAAACACATGAGAACTTGGAACATCTAGCCATGATGGAGAGAGTTCTAGGGCCACTACCTCCTCATATGGTAGTCAGGGCTGATCGTCGGGCTGAAAAGTATTTTAAAAGAGCTGGACGATTAAGTTGGCCTGTCAGTTCAACCTCAAGAGAAAGCTTGAGAGCAGTTTGGAAATTGCCACGGTTGCCGAACCTTATAATGCAGCATGTTGATCATTCTGCTGGGGATTTGATTGACCTCTTGCAAGGGCTCTTACGGTACGACCCTTCAGAACGGCTTAAAGCTACGGAAGCATTGAGACACCCCTTCTTCACAAGAGATACCAAAAGATATGGCTACCCTTTATAAGTACCCCAAACATAATGGTTGGGAGGAAAAAACACGGTTGAGAAATGAATGAATAGCATAGAAACACACTTGAAATCGTTTGATTGTTTGCTCCACTGTATAGTGAGAATTTCGATTTGTAATGTGCATTAATTGTTATTCCCTTGTTTCTTTTCTTTTCTTAACGTTTGCTGGCCCTCCCTTTTCTCCGTGTTTGTGTTTGAGCGAGTAATTAATTGTTGCTGCTTCGCAGTCTGTTGAAAAACTCGAGTATTTAACTCGAAATGCCTCTTACAATACTTCACTTTGCCCTTAAAAAAAAATCGTATAGAAATTATTGAAGTGGATCCAA 2058 0.4247 METQRIIEFPHRNMDKRPRKKRRLTWDMPPPPPPLPPPQLQVLPTVYCTQEVGNGVVPNHAYPPVFYRGIPRNGSPPWRPDDKDGHYVFAVGENLTPRYKILSKMGEGTFGQVLECFDDEKKEVVAIKIVRSINKYREAAMTEIEVLLRLASHDVDGARCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREFGRQLLESVAFMHDLCLIHTDLKPENILLVSSEFIKVPDYKFLSRTTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVVRADRRAEKYFKRAGRLSWPVSSTSRESLRAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPSERLKATEALRHPFFTRDTKRYGYPL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01687 438 FunFam Serine/threonine-protein kinase AFC2 86 179 - -
Pste5g01687 438 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 2 431 - -
Pste5g01687 438 SMART serkin_6 99 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01687 438 ProSiteProfiles Protein kinase domain profile. 99 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01687 438 MobiDBLite consensus disorder prediction 1 38 - -
Pste5g01687 438 Pfam Protein kinase domain 99 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01687 438 FunFam Serine/threonine-protein kinase AFC2 175 427 - -
Pste5g01687 438 MobiDBLite consensus disorder prediction 1 26 - -
Pste5g01687 438 SUPERFAMILY Protein kinase-like (PK-like) 86 431 IPR011009 -
Pste5g01687 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Pste5g01687 438 Gene3D Phosphorylase Kinase; domain 1 86 179 - -
Pste5g01687 438 CDD PKc_CLK 86 427 - -
Pste5g01687 438 Gene3D Transferase(Phosphotransferase) domain 1 153 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01687 Pste-Chr5 10681367 10685749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01687 99 427 Core Cell Cycle Gene Families AT1G76540 25.731 3.03e-28 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Pste5g01687 Pkinase 1.3e-49 CL0016