Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01681 ATGGAAGATCAGGGGGCAAAGGGTCCAAGGCATGGCCCTGAGAAGAGTGAAGCGGTTCGGTCAAGGTGGACACCGAAGCCAGAACAAATCCTCATACTTGAGTCCATCTTCAACAGTGGCATGGTGAACCCCCCAAAGGACGAAACAGTAAGAATAAGAAAGCTTCTTGAGAAATTCGGCACTGTCGGTGACGCCAATGTCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCTCGCCGCCGCCAGCGTCAGATGATGCAGCAGGCCACCGCCGCCACCGCCCCTCAGCCTCAGCCTCAGCCTCAGCCTCTTCCGGCTCCTGGTGCAATTCCACATGATCATGCTCATGCTCATGTCAACCTCACTGCTACTCCCAACATGGCTTTTCCTTCTTCTCCTTCTTTTGAAATCCTTGGCTCTTCATCTTCTGCTGCTGCTGTTGGCCAACAACAACAACAACCCTTTGAAGCTTTCTTCTCAGTTTCTTCTCCTCAAATGCCTTTCCTTGAAAAAATTGACCACACTTCACATGCATCATCAGTTTTTTACCCTCCTCTTGATCCGAATTTCAGCTACCAGGCTGGTAATTAA 591 0.5059 MEDQGAKGPRHGPEKSEAVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQRQMMQQATAATAPQPQPQPQPLPAPGAIPHDHAHAHVNLTATPNMAFPSSPSFEILGSSSSAAAVGQQQQQPFEAFFSVSSPQMPFLEKIDHTSHASSVFYPPLDPNFSYQAGN 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01681 196 ProSiteProfiles 'Homeobox' domain profile. 16 81 IPR001356 GO:0003677
Pste5g01681 196 MobiDBLite consensus disorder prediction 1 22 - -
Pste5g01681 196 MobiDBLite consensus disorder prediction 76 104 - -
Pste5g01681 196 SUPERFAMILY Homeodomain-like 14 88 IPR009057 -
Pste5g01681 196 SMART HOX_1 18 85 IPR001356 GO:0003677
Pste5g01681 196 FunFam WUSCHEL-related homeobox 11 20 87 - -
Pste5g01681 196 MobiDBLite consensus disorder prediction 1 23 - -
Pste5g01681 196 Gene3D - 20 87 - -
Pste5g01681 196 PANTHER WUSCHEL-RELATED HOMEOBOX 11 4 193 IPR044558 GO:0003700|GO:0048830
Pste5g01681 196 Pfam Homeodomain 20 80 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01681 Pste-Chr5 10647542 10648132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01681 7 86 Wox Gene Family AT5G17810 78.049 3.14e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pste5g01681 Homeodomain 5.8e-13 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01681 5 10647542 10648132 Pste5g01681 5 10647542 10648132 ECH