Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01660 CCACAACCTCCTCCTATATAAACACGAGCCTTCTGTTGTGCACCGGTGTGCTATCTTATTCTTGTGGCTCAAGAAATAGGTTAGTTCCGAGCTGACACAAGATGGCTAGTGATAAACAAAAACTGTTAAACAGACTCAAGCCATTCATAGGTGTAGTGTTCTTACAGTTTGGATATGCTGGCATGGATATTCTATCCAAAGCTGCACTAAACAAGGGAATGAGTAACTATGTATTTGTAGTGTATCGTCATGTTTTTGCCTTTGTTGTCATGGCCCCTTTTGCAGTGTTCTTGGAGAAGAAAGTAAGGCCGAAGATGACATTTTCAATCTTCATGAAGATAGTGATTCTCAGCTTACTAGAGCCTGTTATTGACCAAAATTTATATTTTTTGGGAATGAAGTACACCACAGCAACCTTTGCTGTTTCCATGTACAATGTCCTCCCTGCCATTACCTTTGTCATGGCTTGGATTCTTAGGCTTGAGAAGGTAAAATTAAAAAGTATGCGCAGTCAAGCAAAGGTGGTGGGAACTTTAGCCACTGTTGCAGGTGCCATGGTCATGACACTGATAAAGGGCCCGGTTCTTGATCTTTTTGGAACTCATGCAAGCACTAACCACAACCTGCAAAGTGGTGGGGTGAATCTTCAACATGCAATAAAGGGATCAGTGATGATCACTATTGGCTGCTTTAGTTGCGCTTGTTTCATGATTCTCCAAGCTATTACCATTGAAGCCTACCCTGCTGAGCTCTCTCTAACTGCATGGATATGTCTGTTGGGGTCAGTTGAAGGTGGGGTAGTGGCACTGGTTATGGAAAGGAAAAATCTTTCAGCTTGGTCTCTGAAATGGGATACAAAACTTCTGGCTGCTGTCTACAGTGGCATAGTTTGCTCAGGAATGGCTTATTACATTCAAGGAGCAGTGATGAAAGATAGAGGGCCGGTCTATGTAACAACTTTTAACCCACTCTGCATGGTAATTGTAGCCATCTTGAGCTCCTTCTTTCTGGCTGAACAAATGTACCTCGGGAGGGCGGTTGGAGCTATTGTAATTATTTTCGGACTGTATCTTGTGGTGTGGGGTAAAAGCAAAGAATACGACTCATCAAGTACAGTTACTGAAGAACATACATTGCCATCCAAGAAAACAGTAGAGAAGAGCAACAGCAAAGAGGAGGTGTATTCTAATTACGAGGCCATCTCTCTCAGTAACTTAGGCACGGGAAACATAGCACGAGATGAACAAGTATGAGGAAGCATACCAAATTCAATCTATATTTCAGCAATCAGGAATATTTCAACAGTCCAAATGCCTATTTGACAGCAGAAACTATTTAGGTTCTTAGTGAATGTTTGGTTTAACGTTAGAAAATCCTTAATCGGTTATTAAATCAAAAGCTATATGTGTATGGGAATATGTTTGTAACCTTAAACCAAACAAACACTTAGTTGTTTGATCAATTATGATGTAGTAGAGGTTTTTAATATAACACTATGGTCAAATGGCAAGTTTTATATATGAGGAAAGAAATTCCGACCAAAAGAAGACTGTGCAACTTCGAATACACATTATATTGATGCAGAG 1586 0.4035 MASDKQKLLNRLKPFIGVVFLQFGYAGMDILSKAALNKGMSNYVFVVYRHVFAFVVMAPFAVFLEKKVRPKMTFSIFMKIVILSLLEPVIDQNLYFLGMKYTTATFAVSMYNVLPAITFVMAWILRLEKVKLKSMRSQAKVVGTLATVAGAMVMTLIKGPVLDLFGTHASTNHNLQSGGVNLQHAIKGSVMITIGCFSCACFMILQAITIEAYPAELSLTAWICLLGSVEGGVVALVMERKNLSAWSLKWDTKLLAAVYSGIVCSGMAYYIQGAVMKDRGPVYVTTFNPLCMVIVAILSSFFLAEQMYLGRAVGAIVIIFGLYLVVWGKSKEYDSSSTVTEEHTLPSKKTVEKSNSKEEVYSNYEAISLSNLGTGNIARDEQV 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01660 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Pste5g01660 383 Pfam EamA-like transporter family 19 154 IPR000620 GO:0016020
Pste5g01660 383 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020
Pste5g01660 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 331 - -
Pste5g01660 383 PANTHER WAT1-RELATED PROTEIN 13 338 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01660 Pste-Chr5 10528846 10531822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01660 5 373 Nodulin-like Gene Family AT2G37460 63.957 1.23e-174 489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01660 5 10528846 10531822 Pste5g01660 5 10528846 10531822 ECH
Pste5g01660 5 10528846 10531822 Pste4g02416 4 17193218 17198865 PCT