Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01650 ACAAAGGCGAATGAGAATGGCGCTTTTATCATCTTCCTGTTGCTGCTGCCTTTCCCCTAAACCATTTCCATTCAATCTCACTCTGCTCCAACGCCACCGTTTTGTTAGCTTCAAACCCTATACTCGCTCTCACCAAACTCCGTTACCGTTAGTCTACTCCACAACCACAAGACAAGGGTTTGACACCGTTAACATTGCTGAAGATGTCACCCAGCTCATCGGAAATACGCCCATGGTATACCTCAATCAAGTTACGGAAGGTTGTGTTGCTAACATTGCTGCCAAACTCGAGTCTATGCAACCTTGCCGAAGTGTTAAAGACAGAATTGGCTATAGTATGTTATCTGATGCTGAAGAGCTTGGAGCAATTTCTCCGGGAAAGACCATTTTGGTTGAACCAACAACAGGAAATACAGGACTTGGCATTGCTTTTGTTGCAGCAACAAAGGGGTACAAACTTATAGTCACAATGCCTGCTTCTGTTAATGTTGAGAGAAGAATCCTTTTACGTGCATTTGGTGCAGAGGTTGTTTTGACTGATGCTGAGAAGGGGCTAAAAGGGGCAGTTGACAAAGCTGAAGAAATTGTTCACAACACACCCAATGCTTACATGTTTCGACAGTTTGATAACATGACTAATACAAAGATCCACTTCGAAACTACAGGGCCAGAGATATGGGAGGATACCATAGGTAATGTTGATGTATTGGTTGCTGGGATTGGAACTGGTGGCACTGTTACTGGCACTGGACGCTATCTGAAACTGATGAACAAAAATATAAAGGTGGTTGGGGTGGAACCTGCAGACAGAAGTGTTGTTTTGGGCGACAATCCCGGTTTCATACCAAGCATTTTGGATATCAAACTGCTTGATGAAGTTATCAAGGTTACAAATGTTGAAGCTGTTGAAATGGCAAGGAGATTAGCATTGAAAGAAGGCTTGCTGGTTGGGATATCTTCTGGAGCTGCAGCTGCTGCTGCCATAAATTTAGCAAGACGGCCTGAGAATTCTGGGAAACTCATTGTGGTTATTTTTCCAAGTTTTGGTGAAAGATATATTTCTACTGCTCTCTTCCATTCTATCTATGAAGAGGTTCAGAAAATGTAAAATTTAATGAGTAAAGAGGACAACTGTCTATTGTTGACTAAAGCTGCTCTCATCACACTATCATTCAGAGAAGTAGCGGCTGCCTCATGCTTTATATAGATGCATCATTTCAACAAGGCGCAACGCAATTCTTAAAAGCTGAGGTCTTACAGGAAGCAAAAGAAGGGACTGACTTATTTTTCTTTTAATTTTTTTACTGGTAATCTAGCATGGCCTATTCATTTCATTATTCTTCACTCCCCATTCCCAGTTATCCGACTATGTATAAAAAATATATGTAGATATGTACATTACGGGCTGACATTATGGTTGACGATGGTTTTTGGCTGTTGG 1441 0.415 MRMALLSSSCCCCLSPKPFPFNLTLLQRHRFVSFKPYTRSHQTPLPLVYSTTTRQGFDTVNIAEDVTQLIGNTPMVYLNQVTEGCVANIAAKLESMQPCRSVKDRIGYSMLSDAEELGAISPGKTILVEPTTGNTGLGIAFVAATKGYKLIVTMPASVNVERRILLRAFGAEVVLTDAEKGLKGAVDKAEEIVHNTPNAYMFRQFDNMTNTKIHFETTGPEIWEDTIGNVDVLVAGIGTGGTVTGTGRYLKLMNKNIKVVGVEPADRSVVLGDNPGFIPSILDIKLLDEVIKVTNVEAVEMARRLALKEGLLVGISSGAAAAAAINLARRPENSGKLIVVIFPSFGERYISTALFHSIYEEVQKM 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01650 365 FunFam Cysteine synthase 184 351 - -
Pste5g01650 365 CDD CBS_like 71 351 - -
Pste5g01650 365 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 62 359 IPR036052 -
Pste5g01650 365 PANTHER CYSTATHIONINE BETA-SYNTHASE 62 361 - -
Pste5g01650 365 FunFam Cysteine synthase 97 176 - -
Pste5g01650 365 Pfam Pyridoxal-phosphate dependent enzyme 66 343 IPR001926 -
Pste5g01650 365 NCBIfam cysteine synthase 67 355 IPR005856 GO:0004124|GO:0006535
Pste5g01650 365 Gene3D - 104 206 IPR036052 -
Pste5g01650 365 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 92 110 IPR001216 GO:0006535
Pste5g01650 365 Gene3D - 68 351 IPR036052 -
Pste5g01650 365 NCBIfam cysteine synthase A 67 355 IPR005859 GO:0004124|GO:0006535
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01650 Pste-Chr5 10432087 10437989 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01650 58 365 Miscellaneous Gene Families AT3G03630 78.896 1.71e-167 472