Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01632 TTTGGGGGAAGTGTTGTTGAGGGTTTAGTCGAAATCGAAATCCAGAAAGCTCTTGCCTTGCCTGGAAAGATGGCTTTTTTTCTGTCTGGAGCTCACCGTCTTCTTCATTCCCAATTTGCTTCCATTCGTTTCAGTTCCACTCTCACTTCCTCCAAACTCTTTGTCAGCGGTCTTTCTAGACTGACAACAGATGAAAAGCTTAAGGAAGCATTTTCTTCTTTTGGCCGGTTGGTTGAAGCTAAGGTGATAACTGATAGAGCCTCTGGAAGATCGAAGGGATTTGCTTTTGTAACTTATACAACAATAGAAGAAGCTGAAAAGGCTAGAGAAGGAATGAATGCTAAATTTTTGGACGGATGGGTTATATTTGTTGATCCTGCCAAGCCAAGAGAGCCCAGACCTCCTCAGCAATCACAGTCTCAGACCTCTGAAGCTGGTTTCACTGTTAACAAAACGGTTGGGTGGTGTGGTTGATCACTAAAGAAACTTATATTATACTCAACATATTTGGATGAGTTTTTAAAGACTATAATTCAAATCAGCCAATTATACTGCAATTTGTTGAGAAATATTCATATCATCCAGTCATAATTGATTATTGAAATTGACGACAAGCATTACTATTTATGCTAATTTTGACGTCTATTGGAAATTGATCTTTCCTTTGCTGATGCGATGTGATATTCGTCCAACTTCTTTTAGAGCTAATAACCTTGTACCTAAACTTTCTCCACATTTATATTGGAATCTTGTCGAATATATGTAGCATGTGATTAAGTATTTGGGGTTTTCATTCATACTATAGTTTTGGAGAAAGGTGATGCTGCTCCGGC 833 0.3842 FGGSVVEGLVEIEIQKALALPGKMAFFLSGAHRLLHSQFASIRFSSTLTSSKLFVSGLSRLTTDEKLKEAFSSFGRLVEAKVITDRASGRSKGFAFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPQQSQSQTSEAGFTVNKTVGWCG 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01632 157 FunFam RNA binding protein 38 151 - -
Pste5g01632 157 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 51 129 IPR000504 GO:0003723
Pste5g01632 157 Gene3D - 41 150 IPR012677 -
Pste5g01632 157 SUPERFAMILY RNA-binding domain, RBD 49 142 IPR035979 GO:0003676
Pste5g01632 157 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 53 119 IPR000504 GO:0003723
Pste5g01632 157 PANTHER NUCLEOLAR PROTEIN 8 37 156 - -
Pste5g01632 157 SMART rrm1_1 52 125 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01632 Pste-Chr5 10375579 10377857 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01632 51 133 Eukaryotic Initiation Factors Gene Family AT3G16380 38.554 4.46e-13 63.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01632 5 10375579 10377857 Pste5g01632 5 10375579 10377857 ECH