Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01624 TACACTGGTCGCTTGTGCTCCCCATCGTCTTCTAGGGTAACCACGGCGCCACTCGAACAATTGCGGCCATTCCCAAGGATTTTCTTCTTTTCAGAGTGCAGTCCGATTCTCCTTGAGTTTTCAATATGACTTCGTTCTTGAAGCCTGAGAATGCTCTTAAAAGGGCAGAAGAATTAATCAATGTTGGGCAGAAACAGGACGCCTTGCAGACTCTCCATGATCTCATTACTTCGAAGAGATACAGAGCATGGCAGAAGACACTTGAAAGAATTATGTTCAAGTATGTAGAACTCTGTGTAGACATGCGGAAAGGACGGTTTGCAAAGGATGGGCTCATTCAGTATAGGATTATTTGCCAGCAAGTAAATGTTAGTTCCCTTGAGGAGGTGATCAAGCATTTCATGCACCTGTCAACTGAGAAAGCAGAACAGGCCCGTAGCCAGGCACAGGCTTTAGAAGAAGCCCTCGATGTTGATGATTTAGAGGCAGATAAAAGACCAGAGGACTTAATGTTAAGCTACGTCAGTGGTGAGAAAGGAAAGGACAGATCTGACAGGGAGCTTGTTACCCCTTGGTTTAAATTTCTTTGGGAAACATACAGGACTGTGCTTGAAATACTTCGGAACAACTCAAAACTGGAAGCCTTATATGCTATGACAGCTCATCGAGCTTTTCAGTTCTGTAAACAATATAAACGAACAACAGAGTTCCGTAGACTGTGTGAAATCATAAGAAACCATTTAGCTAATCTCAATAAATACCGTGACCAACGAGATCGGCCTGATCTTTCAGCTCCTGAAAGCTTGCAACTGTATCTTGATACAAGATTTGAGCAGCTGAAAATTGCCACTGAGCTTGAACTCTGGCAGGAAGCCTTCAGATCAGTGGAGGATATACATGGATTGATGTCCTTGGTCAAGAAAACACCCAAGCCATCTTTGATGGTTGTTTACTATGTGAAGCTGACGGAAATATTTTGGATATCATCAAGTCATCTGTATCATGCGTATGCATGGTTCAGGCTCTTTTTATTACAGAAAAGCTTCAATAAGAATCTTAGTCAGAAGGATTTGCAATTAATAGCTTCATCTGTTGTTCTGGCTGCACTTTCAGTGCCTCCACATGATCGCACTCATGGTGCGTCTCATTTGGAACTGGAGCATGAAAAGGAGAGAAATTTGAGGATGGCTAATCTCATTGGCTTTAATCTTGAAACTAAACCGGAAAGCAGAGAAATGCTGTCAAGGTCATCTCTTCTAGCTGAACTGGCATCCAAGGGCGTGATGTCTTGTGTAACTCAGGAAGTGAAGGACATTTACCATCTTTTGGAACATGAGTTTCATCCATCTGATCTTGCATTAAAAGCACTGCCTTTGATAACCAAAATCTCTAAGCTAGGGGGCAAGCTTTCTACGGCTTCATCTGTTCCGGAAGTGCAGTTGTCTCAGTATGTACCAGCACTGGAGAGACTTGCTACCATGAGGCTGTTGCAACAGGTGTCCAATGTATACCAGACAATGAAGATTGAGACCCTATCTGGGATGATTCCCTTCTTTGATTTTTCTGTTGTGGAAAAGATTTCTGTAGATGCAGTTAAGCAGAAGTTTGTATCGATGAAGGTTGACCACATGAAAAATGCTGTAATTTTTTGCAAAACGAGTCTTGAGTCTGATGGCTTAAGGGATCACTTGGCCAATTTTGCTGAACAATTAAATAAGGCTAGACAAATGATTTACCCTCCAGATAAGAAACCAACAAAACTGGGAGCTTTACTTCCAAATTTGACAGAGGTTGTGGCCAAAGAACACAAGAGGCTTCTTGCTCGAAAATCAATTATTGAGAAAAGGAAAGAAGAACAAGAACGACAACTTCTTGAAATGGAACGGGAGGAGGAGTCAAAGAGGCTAAAATTGCAGAAAATAACTGAAGAAGCGGAACAAAGACGACTTGCCACTGAGTATGAGCAGAGGAAGAATCAGAGGATCCTCAGGGAGATAGAGGAGAGAGAAAATGAAGAAGCTCAAGCTTTACTCCAGGAAGCTGAAAAGCGTATTAAAAAGAAGGGTAAAAAGCCTATAATAGAGGGGGACAAAATGACGAAGCAAACCTTGATGGAGTTGACTTTGACTGAACAACTCCGGGAAAGACAGGAAATGGAAAAGAAATTGCAAAAGTTAGCAAAAACCATGGATTATTTGGAAAGGGCAAAAAGAGAAGAGGCCGCTCCACTGATTGAAGCTGCATATCAGCAGCGTCTAGTGGAAGAGAGACTTCTTCATGAGCGTGAACAGCAGCAAGAGGTTGAACTCAGCAAACAGAGGCATGAGGGAGATCTCAAGGAGAAGGAGAGGCTTGCTCGAATGATGGGCAACAAGGAGATATATCAAGTGAGAGTTGTTAGTCATCGCCAAGCAGAGTTTAACAGATTGAGAAGAGAACGGGAAGAGCGAATCTCGAGGATTTTACAGTCAAGGAGACAGGAGAGGGAAAAAATGAGGAAGCTGAAGTATTATCTCAAGTTAGAAGAAGAGAGACAACAAAAATTGAATGAGGAGGAGGAAGCTAGGAAACGTGAAGAGGCTGAAAGGAGAAAGAAGGAAGAGAAAGAACGGCAAGCAAAATTCGCTGAGACAACTGAGAAGCAGAAGCAAAGAGACAGTGAACTTGAGGAAAAAGAGAAACAAAGGAGAGAAGCATTATTGGGCAGAGCTGCTGAACCCGCTCCTACAGCCCATCCATTGGAATCGGTAACTGCTCCACCTGTTGCAGTCGCCGCTGCAGCTCCAACCCCAGGGAAATATGTCCCCAAGTTCAGGCGAGAGAGAGCTGAAAGCACAGGAGCTGCTCCTCCCCCGGAAACTGACCGCTGGAACAGTAGCAGCAGGCCAGATAGTGACAGGTGGCGTAGTGGATCTGCCTTTGGTTCTGGTGGTTCAAGGTCATCTTCTACTTGGTCATCTTCCAGGAATGCCCGTTGAACATTTTGTGCCGTGATTTATTGCTGGTGACTTTTTGGGTGTTCTCTTTGTACTCTTCCCATATTCTAGAATTCTTTTTGACGATGAGTTTTTAAATTTATTATCTTTTTAAAACTCACGAAGACCTCTATTGGATTGAGGAACATGGCAACAAAATTTTCTATTTATGGTCGAGTGGATTGAATATGGTAATCGAATTTTCAATTAGACGAGTGCTTTCGACCTATTTTTCTACTGGTTGATATTGTGTTGGTAGTAGAAAGTGAAGGGTGGCCTTAGTATCAGGTTTTTTTATATTACTTCACCA 3285 0.4277 MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELELWQEAFRSVEDIHGLMSLVKKTPKPSLMVVYYVKLTEIFWISSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDRTHGASHLELEHEKERNLRMANLIGFNLETKPESREMLSRSSLLAELASKGVMSCVTQEVKDIYHLLEHEFHPSDLALKALPLITKISKLGGKLSTASSVPEVQLSQYVPALERLATMRLLQQVSNVYQTMKIETLSGMIPFFDFSVVEKISVDAVKQKFVSMKVDHMKNAVIFCKTSLESDGLRDHLANFAEQLNKARQMIYPPDKKPTKLGALLPNLTEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLKLQKITEEAEQRRLATEYEQRKNQRILREIEERENEEAQALLQEAEKRIKKKGKKPIIEGDKMTKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQQRLVEERLLHEREQQQEVELSKQRHEGDLKEKERLARMMGNKEIYQVRVVSHRQAEFNRLRREREERISRILQSRRQEREKMRKLKYYLKLEEERQQKLNEEEEARKREEAERRKKEEKERQAKFAETTEKQKQRDSELEEKEKQRREALLGRAAEPAPTAHPLESVTAPPVAVAAAAPTPGKYVPKFRRERAESTGAAPPPETDRWNSSSRPDSDRWRSGSAFGSGGSRSSSTWSSSRNAR 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01624 950 Coils Coil 615 649 - -
Pste5g01624 950 MobiDBLite consensus disorder prediction 804 859 - -
Pste5g01624 950 MobiDBLite consensus disorder prediction 804 950 - -
Pste5g01624 950 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Pste5g01624 950 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 929 IPR027512 GO:0005852
Pste5g01624 950 Gene3D UVR domain 217 268 - -
Pste5g01624 950 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Pste5g01624 950 Coils Coil 796 844 - -
Pste5g01624 950 Gene3D - 269 342 - -
Pste5g01624 950 Gene3D - 352 507 - -
Pste5g01624 950 Pfam PCI domain 373 508 IPR000717 -
Pste5g01624 950 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Pste5g01624 950 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 IPR000717 -
Pste5g01624 950 Coils Coil 561 602 - -
Pste5g01624 950 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 926 IPR027512 GO:0005852
Pste5g01624 950 Coils Coil 93 120 - -
Pste5g01624 950 Coils Coil 667 697 - -
Pste5g01624 950 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Pste5g01624 950 MobiDBLite consensus disorder prediction 910 950 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01624 1 947 Eukaryotic Initiation Factors Gene Family AT4G11420 71.777 0.0 1329