Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01619 ATTGAATTAAACTGTAGTCAAATGCACGTTTGATTTAGTCTCTTTTCTGCTTCTGTTGTTGTTTGAATGCCAATTCAGATCGAACTCAACTCCACCACCGCCACGTTGTCGTTTTCACTTTTTAGGGTTCTCCGTTTCTTTCTGGCTACTGTTTAGGAAATGGGAAGCAGAAAAGAAGAAGAGAGGAACGAGAAAATCATCAGAGGTCTCATGAAGCTTCCACCCAATCGAAGATGCATCAACTGTAATAGTCTGGGTCCACAATATGTTTGTACGAATTTCTGGACCTTTGTTTGCATGACCTGCAGTGGAATACAACATTTCAATAGAGATAACAGATTCCATTCAGAAGTTTTGCTTTCAAATTTCTGGTTTGATCGTGAGTTTACCCATCGTGTGAAGTCTGTATCTATGGCAAAGTTCAGTTCACAAGAAGTTGATGCTCTTCAAAATGGGGGTAACCAGCGTGCAAGGGAAATATATTTGAAAAATTGGGACTTCCAAAGTCAGCGCTTGCCAGATAGCAGTAATGTTGATAAAATAAGAGAGTTTATGAGGAATGTATATGTGAATCGAAGCTATGTTGCGGCAAAGTCTTCTGATAAGCCTCCAAGAGATGTGCGAACAAGTCCTAGAATCCATGAAGATGATACAAGGCGTGCCAGTTCCTATCACTCATATTCACAAAGTCCTCCATATGATTACCAATATGAAGATCGACGATATGGAAAACAAGCAGCTGCACTGACCAGGAAGCCTGGTTCAGATAAAGTTCGCTACAAAGGAAAAATAAATAGTATTATCTTTAGTCCTGGTCACTTCAGTGATCATGAATATGCCGACAGATTTGCAAATGAGGGATCTGGTCCAAGAATGTCCAACTTTTCTGTGCCTAATGGTGGTGAGCAATTTAAATCTGATGTTCCGCATTCTGATACCTGTTCAAGTGAGGATGTATGGTCCCACTCTCATGCAATAAATACGTCTCGAGAAACACACTCCAAGAGAGATGCAGATGGAATTCACTGTCCACAGAGAACTACTTCATTGGGATCAACAGAAAGCAACCTGTCATCCTTAAGATCTTACAGTTCTGGTGCTTTAGTTGATTTTTTCTCGGAACCATTCCAAGCTTCTGGACCCCATCAAAATAAAGTGTCTTGTGCTCCACGATCATCTGATCTACAGAGTTCTGTTAGTTCAGATCTTTCTGAGGCACCAGCTGCACCCAAATTATTGTCTTCATCTGTTTCCTCTTTTGACCTTTTCCAGTTGCCAGCTGCACCTGCCCAGGCTTCATCAGTTGATCCTTTTCAATCATCTGCTTTATCTGCAATTCCATCTTTCAATGAGCATCAACCTGCGAAAACATCTCAACCCTCATCTGTTGACTTCTTTATGGATCTTTCTCAGCTGCCATCTGCTGCTACCTCAACTGAGAAGTCACTGGAGTTGTCTGTCCCTAAAAATGAAGGATGGGCAACATTTGATACGCCTCAGCCCACAACATCTACTGCACAATTAGAAATTCCAACAGCAGTACCTTCAACTGCTGACTCCTTGCAGGAAAGATTTGATCCATTTTTGAACTTAAACAATAATATTCTATGGCCATCTTCTGAAGCTTCTAGTATTAGGGTTCTTTCTTCAGTTACTTCTAATTTACGGCATGATGGCACATTGAATGGAGAAGAACAAGTTCCTGTTACGGCAACAAACACTCAACCATGGAATGCATTTAAAGATTCTGCTACCTCTGTTCCTGTGGATGCCCTTAATCAAGGATTGCAGATGCATGATCTTCCATCAACTGATGATCAGTTTTTGGATTTAAGAGCTTTTGAGGGATCCAATAAAGGTGGTATGCAAGGAATTGCTGCTGGTTCTGGGTTTGATCCTGATTTTTCATCACATTTTGTTAGTGGCTCACCATATCCTCCATCTTCATTTCCTCCAATGGGAAAAGTTCAGCCTAATGAAATCAACCTCAAATCGACTAATCCATTTGATTGTCCTTATGACTCAGATGTAGAACATAATAATACGTGTGAATTGCAATTCCTTGATGTCAGCTCTCTACAAGCTTCTCTGCCAGATTCCCAGCTACCCCCTACCTTCCACAGTGGCATTGCTGAACCTTGGCTCCCTCCAAATACACTGAACACTTATGTTTCCTCTGCAGGACAAGGTGGTTTGACATTCATGGCTGCACCACCTCCAAGTTCTCAAATACTGGTGTCGGCCACATATGGCTTCCTTCTTACTGCTAATCTTGAGAGGAAAGAAAGTTGGCTTCTTGGAACATCCAGACGAATGGACCAGTTGCTTCTGTTGGGGGAAATCCCTTTGCATAGGATTAGAGTGAAATCATACCTTATATATGGAATCATTCATATATCATAGTGAAATTTATGGGCAGCCAATCTAGTTGCTTATGAGATAGATTTTAATGCTTTTATTCTTGTCAGATTAAAATGCTGCCGATTACTTCCATGCCAAGTAAGTCCTTGTAATCCCTATCCATGGCATATACAGGCCATGCGTTTATAGTTTTGTAATTGAATGACATAATAGTTAATTAGTTATAGTAAAAAACAATGACTTTGTAGTTAGAACTTTTGAAATGCTTAATTAGTTTAGTGGCAGGTAATGAGCACAATCAATTTGGAACTAGAAGTGTGAGATTTTGAGGTATTTGACTGCTGTAATTGTACGCGTTTAAGAGTGTCCACGCCTATTATTTGCAATTCAATTTTCAGACTGATTCTATGTAGATGCTTTTAACAACTAAGAAGTGTGCACTACTTTAACA 2812 0.4015 MGSRKEEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTNFWTFVCMTCSGIQHFNRDNRFHSEVLLSNFWFDREFTHRVKSVSMAKFSSQEVDALQNGGNQRAREIYLKNWDFQSQRLPDSSNVDKIREFMRNVYVNRSYVAAKSSDKPPRDVRTSPRIHEDDTRRASSYHSYSQSPPYDYQYEDRRYGKQAAALTRKPGSDKVRYKGKINSIIFSPGHFSDHEYADRFANEGSGPRMSNFSVPNGGEQFKSDVPHSDTCSSEDVWSHSHAINTSRETHSKRDADGIHCPQRTTSLGSTESNLSSLRSYSSGALVDFFSEPFQASGPHQNKVSCAPRSSDLQSSVSSDLSEAPAAPKLLSSSVSSFDLFQLPAAPAQASSVDPFQSSALSAIPSFNEHQPAKTSQPSSVDFFMDLSQLPSAATSTEKSLELSVPKNEGWATFDTPQPTTSTAQLEIPTAVPSTADSLQERFDPFLNLNNNILWPSSEASSIRVLSSVTSNLRHDGTLNGEEQVPVTATNTQPWNAFKDSATSVPVDALNQGLQMHDLPSTDDQFLDLRAFEGSNKGGMQGIAAGSGFDPDFSSHFVSGSPYPPSSFPPMGKVQPNEINLKSTNPFDCPYDSDVEHNNTCELQFLDVSSLQASLPDSQLPPTFHSGIAEPWLPPNTLNTYVSSAGQGGLTFMAAPPPSSQILVSATYGFLLTANLERKESWLLGTSRRMDQLLLLGEIPLHRIRVKSYLIYGIIHIS 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01619 747 PRINTS HIV Rev interacting protein signature 80 101 IPR001164 GO:0005096
Pste5g01619 747 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Pste5g01619 747 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Pste5g01619 747 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 149 IPR001164 GO:0005096
Pste5g01619 747 MobiDBLite consensus disorder prediction 144 182 - -
Pste5g01619 747 Gene3D Arf GTPase activating protein 2 154 IPR038508 -
Pste5g01619 747 SMART arf_gap_3 11 149 IPR001164 GO:0005096
Pste5g01619 747 SUPERFAMILY ArfGap/RecO-like zinc finger 9 142 IPR037278 -
Pste5g01619 747 MobiDBLite consensus disorder prediction 275 303 - -
Pste5g01619 747 MobiDBLite consensus disorder prediction 327 349 - -
Pste5g01619 747 PANTHER ARFGAP/RECO-RELATED 1 692 IPR044820 GO:0005096
Pste5g01619 747 Pfam Putative GTPase activating protein for Arf 12 143 IPR001164 GO:0005096
Pste5g01619 747 MobiDBLite consensus disorder prediction 146 169 - -
Pste5g01619 747 CDD ArfGap_AGFG 11 143 - -
Pste5g01619 747 MobiDBLite consensus disorder prediction 275 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01619 Pste-Chr5 10331311 10343482 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01619 14 108 C2H2 Transcription Factor Family AT4G05330 30.208 2.15e-07 51.6