Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01602 AAATAAAGAGAGGGAAGAATGAGAATGGAGAAGAGAAACCCATCTTGTGAGTTGTAACTCCGAAAAAAAGCTCAGTGGAACTGTTCAAAGATCCCATTCCCAGATTCAACTCAACAACAAAACAAACTCTCTTTCTCTTTTTTCCATCTTATCACCAAATGCAAAATTCTAATCCATCTTCTCCCCCGTCCCTGCCTCCGGTGGACACCGCGCCGTTCCTACACCGGAGCCGCCGCCTTCTCCGCCGCGCCCCGCCGCCTCTGCAAACGGCGGCTCGGTTCTTCCGGCGCGCGAGCGGGCGCCGCATGATGCTGCGGGAGCCCTCGGTGCGCGTCCGGGAGGCGGCCGCGGCGGAGGTGGAGGGGCGCCAGAGCGAGTGGGCGTACTCGCGGCCGGTGGTGGCGCTGGACGTCGCGTGGAACGCCGCGTTCCTGGCGATCGGCGCGGCGGTGGTGGCGCTGAGCGCGAAGGAGGAACCGTGTGTTCCCCTCAGAACGTGGATTGTGGGGTACTTGTTGCAGGGCGTGTTGCACTCTCTCTGCGTCGTTGTTGAGTTCAGAAGAAGGAGAGCGAGGAGTGGGACCCACGTTGAATGGAGCTTCAGTTCCGGAAGTGATCAAGACTTTTATGCTTCCGAGCAGTTTCTCGAAGGAGAGGGAAACAGCCTCACAAAACACATAGAGTCTGCAAATACTATGCTTTCATTCATATGGTGGATCCTTGGGTTCTACTGGGTAACTGCTGGTGGTCAGAGTTTGACAAGGGATTCACCTCAGCTTTACTGGCTCAGCATCACATTTCTTGCTTTTGATGTTGTGATTGTACTCATCTGTGTTGCTGTTGCATGTCTCATTGGTATCGCTGTTTGCTGTTGTCTGCCTTGCATACTTGCTATTCTGTATGTAGTGGCAGATCAGGAAGGGGCAACGAAAGAAGAGATTGACCGGTTACCAAAATATAAGTTCAGAATAGTAAAGGAATTTAAGAAAGAAGGTGATATTGAAGAATCTTCCAGAGGAATAATGACCGAATCTGACTGTGAGACGGCCACTGAACATGCTATTGCCTTAGAAGATGCAGAATGCTGTATCTGCCTTTCTGACTATGATGATGGTGCTGAACTCAGAGAACTACCTTGCAACCACCATTTTCATTGCACATGCATAGATAAATGGCTGCTAATAAATGCTACCTGCCCTCTCTGCAAGTTTAATATTTTGAGGACTGGTAGCCACCATCAAGAAGTTTGAACAAGTTCCCAGTTGCATTGCCTTCATTAGTATAATAGAATCCTTTTCACATTAACCACACACTTTTTGCAAGTAGCACCAGATTGACCTCGCTCTGTTTTCAGTGCTGTGTATATTTCTCTCCTAACCATATTGGAAACAGTTTGTTTCCAGCAGAAAGTGTATTACAGTAACTAAAATGAATTTGAGTCCTCATTTCAGCTGATGACATGACCATATATATATATACAATATCCTATACTAGGAGTCGTATTTATTGCACAAGGTCCTCCTATACCTATTGTGCATAATTGTATCTCTTTAAATGACAAGGTCATGGAGGCTAGAATGAGAATATCCAAATCCGTGTATATTGTTGGTCCTGTAATTTCAGTTTAGCATAATATAAGTGCCATGTTCTATAGATCGAACAATAAACAGAACTGGCAGATTCTAG 1686 0.4692 MQNSNPSSPPSLPPVDTAPFLHRSRRLLRRAPPPLQTAARFFRRASGRRMMLREPSVRVREAAAAEVEGRQSEWAYSRPVVALDVAWNAAFLAIGAAVVALSAKEEPCVPLRTWIVGYLLQGVLHSLCVVVEFRRRRARSGTHVEWSFSSGSDQDFYASEQFLEGEGNSLTKHIESANTMLSFIWWILGFYWVTAGGQSLTRDSPQLYWLSITFLAFDVVIVLICVAVACLIGIAVCCCLPCILAILYVVADQEGATKEEIDRLPKYKFRIVKEFKKEGDIEESSRGIMTESDCETATEHAIALEDAECCICLSDYDDGAELRELPCNHHFHCTCIDKWLLINATCPLCKFNILRTGSHHQEV 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01602 363 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 287 355 IPR013083 -
Pste5g01602 363 ProSiteProfiles Zinc finger RING-type profile. 309 350 IPR001841 -
Pste5g01602 363 SMART ring_2 309 349 IPR001841 -
Pste5g01602 363 PANTHER TARGET OF ERK KINASE MPK-1 45 355 - -
Pste5g01602 363 Pfam Ring finger domain 308 350 IPR001841 -
Pste5g01602 363 SUPERFAMILY RING/U-box 296 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01602 Pste-Chr5 10206777 10212423 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01602 7 360 C3H Transcription Factor Family AT1G68070 47.075 5.17e-110 323
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01602 5 10206777 10212423 Pste5g01602 5 10206777 10212423 ECH