Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01594 TGCTCTCTCAGGTATATAAGGCAGATTCTGAGATACCCATATCACCTTTTGTGGTGCTCCATGGCTTTGAATTCCGGAGTTGGAGGAATCAATCGACATGAGGATTAACAATTTAACCGATGAAGCTGAGTCAATAGTGGATGCTAGTGTTTTCTCAAAGGGGTTTTGAGAAGTAGTAGTTTCAGTGGGGTGCTTGCTTGATTTAAAAAAGAAAGGAGAGAAAGAAGAAAAAAAAAAGAAGCAAAAGTGGCTACTTTGATGAGTTTTGGGGGGTTTCTGGAGGCCAAACAAAGTGGTGGAGGTGGTAGGATCGTAGCAGATATTCCTTACAGTAACGGTTCCAACCACAGCAACGATATAATGCCCTCTGGTGCAATCTCACAGCCTCGTTTAGCCACTCCTACTTTGGCAAAATCCATGTTCAATTCTCCTGGCCTTTCTCTTGCACTTCAAAGTGATATAGATGGACAAGGGGATGTGGCCAGATTAATGCCCGAGAATTTTGAGCAAAATGGTTTGAGAAGGAACCGGGAAGAGGAGCATGAAAGCAGATCTGGCAGTGATAACATGGATGGTGCTTCTGGTGATGATTTCGATGCTGCCGACAACCCACCAAGAAAAAAGCGTTATCACCGACACACTCCTCAGCAAATTCAAGAGCTTGAAGCGCTCTTCAAGGAGTGTCCTCACCCGGATGAGAAGCAAAGGCTTGAACTAAGCCGAAGGCTTAATTTGGAAACGAGGCAAGTAAAGTTTTGGTTCCAAAATCGAAGAACACAAATGAAGACACAATTGGAACGACACGAGAACTCGCTGCTAAGGCAAGAAAATGACAAGCTTAGAGCGGAGAACATGTCTATGAGGGAAGCTATGAGGAATCCTATATGCTCAAACTGTGGAGGTCCAGCAATGATCGGTGAGATTTCACTTGAAGAACAGCACCTCAGGATTGAGAATGCTAGATTGAAAGATGAACTAGACCGTGTTTGTGCACTCGCTGGCAAGTTTTTGGGTCGCCCCATTTCATCTTTAACAGGTTCAATTGGGCCTCCATTGCCAAACTCAAGTTTGGAGCTTGGGGTTGGGAGCAATGGTTTTGGAGGTTTGAGCACTGTGCCTACAACATTGCCTGATTTTGGGGTGGGAATATCAAGCCCCTTGGCCATGGTGTCACCTTCAACAAGACCAACAACAACTACAACTGTGGTGACTCCTGGGTTTGACAGATCAATAGAGAGGTCTATTGTTCTGGAGCTTGCTTTGGCTGCAATGGATGAACTGGTGAAGTTGGCTCAGACTGGTGAGCCTCTTTGGATCAGGAGTTTGGAAGGGGGAAGAGAAATTCTCAACCAAGAGGAATACACAAGGACAATGACCCCTTGCATTGGCTTGAAACCCAATGGTTTTGTCACCGAGGCGTCTAGACAAACTGGCATGGTCATCATAAACAGCTTGGCCCTTGTTGAAACATTAATGGACTCAAATCGATGGTCAGAGATGTTCCCTTGTTTGATTGCCAGAACCTCAACCGCTGAAGTTATATCTAATGGAATAAATGGGACTAGAAATGGTGCCCTTCAGCTAATGCATGCTGAACTTCAAGTCCTTTCGCCCTTGGTTCCTGTTCGTGAGGTCAATTTTCTACGCTTTTGCAAGCAGCACGCAGAGGGGTTATGGGCAGTGGCGGATGTGTCCATAGATAGCATCCGAGAAACTTCTGGTGCACCCACTTTTATGAACTGTAGGAGGCTTCCTTCTGGTTGTGTGGTGCAAGATATGCCAAATGGTTACTCTAAGGTGACATGGGTTGAACATGCAGAATACGACGAAAGCCAAATTCACCAGCTCTATAGAGCCTTGTTGAGGTCAGGCACGGGGTTTGGAGCACAACGTTGGGTTGCTACCCTTCAACGGCAATGCGAGTGCCTAGCCATTCTCATGTCCTCAGCAGTTCCCTCTAGGGAACATTCAGCAATAAGCTCAGGGGGAAGGAGAAGCATGTTGAAGCTGGCGCAGAGGATGACGAACAATTTCTGCGCTGGTGTATGCGCATCGACGGTGCACAAGTGGAACAAGCTGAACGGAGGGAACGTGGGAGAGGACGTGAGGGTGATGACGAGGAAGAGCGTGGACGACCCGGGCGAGCCACCGGGCATCGTCCTGAGCGCAGCCACCTCGGTGTGGCTGCCGGTGTCACCGCAGAGACTCTTCGACTTCCTCCGGGATGAGAGGCTCCGGAGCGAGTGGGACATCCTCTCCAACGGTGGACCCATGCAAGAGATGGCTCACATTGCCAAGGGACAGGACCATGCTAACTGTGTCTCCCTCCTTAGAGCCAGTGCTATGAATGCGAACCAGAGCAGCATGTTGATTTTGCAGGAGACGTGCACAGACGCGTCTGGGTCGCTTGTGGTGTACGCGCCCGTGGACATTCCCGCAATGCACGTTGTGATGAACGGTGGTGACTCTGCTTACGTGGCGCTTCTTCCGTCGGGATTCGCCATCGTGCCGGACGGTTCCGGCGGCAACGATGAGGAGACCGGTGGCGCGTTGCAGCAGAGGGCGAGTGGGTGTCTTCTGACGGTGGCGTTTCAGATTCTCGTGAACAGCCTCCCGACGGCGAAGCTGACGGTGGAGTCGGTGGAGACGGTGAACAACCTTATATCTTGCACCGTGCAGAAGATAAAAGCAGCGCTTCACTGCGATAACTGAAGTCACGTGCGCGTCACGTGAATCCCCTTTCAGGGATTGTTTATTATACAGTAATTATATAATATTGTTATCATTTTGTTTTGGAAGATTAATCAACATTTGTAGTTAAAGGTGGGATAGGAGGCGCGTGTGTAGGACGCGAGGGGTGGGGGTGTTGAGTCAAGAACGAACCCCGCGTGGGTGAAAGAACTCCTTGCATTGTGGTGAGGATCCGAAACTTGGTCGGATCGGGTTAGGATCTGTAACGCAAGGGTGGTGGTTCGGGTATTGACTCGGGTCGACCCCGTGTCTGCTCTACTAGCAGCAGAAGGAAAAGCAGAATAGAAATGTGAAAAACAAAAAGGAACAAAATTGTGTTTCTGGTTAGGTATATTATATAAGTTATCATTTTTATTTGTATTGACTTGGGAGTTTGCTAGAATTGGATCTAGTAGTTTCTTCAATATGATCAAATCAATAATTTGTTTTCATTTTTTGGAATTAAGTTCGTACCCTTTTTCCGC 3215 0.4812 MSFGGFLEAKQSGGGGRIVADIPYSNGSNHSNDIMPSGAISQPRLATPTLAKSMFNSPGLSLALQSDIDGQGDVARLMPENFEQNGLRRNREEEHESRSGSDNMDGASGDDFDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLNLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSMREAMRNPICSNCGGPAMIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLTGSIGPPLPNSSLELGVGSNGFGGLSTVPTTLPDFGVGISSPLAMVSPSTRPTTTTTVVTPGFDRSIERSIVLELALAAMDELVKLAQTGEPLWIRSLEGGREILNQEEYTRTMTPCIGLKPNGFVTEASRQTGMVIINSLALVETLMDSNRWSEMFPCLIARTSTAEVISNGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGLWAVADVSIDSIRETSGAPTFMNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQIHQLYRALLRSGTGFGAQRWVATLQRQCECLAILMSSAVPSREHSAISSGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNGGNVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHANCVSLLRASAMNANQSSMLILQETCTDASGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGSGGNDEETGGALQQRASGCLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCDN 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01594 817 FunFam Homeobox-leucine zipper protein GLABRA 2 332 555 - -
Pste5g01594 817 MobiDBLite consensus disorder prediction 85 101 - -
Pste5g01594 817 CDD homeodomain 120 178 IPR001356 GO:0003677
Pste5g01594 817 Pfam START domain 332 556 IPR002913 GO:0008289
Pste5g01594 817 CDD START_ArGLABRA2_like 327 555 - -
Pste5g01594 817 ProSiteProfiles START domain profile. 323 559 IPR002913 GO:0008289
Pste5g01594 817 Gene3D - 108 194 - -
Pste5g01594 817 SMART START_1 332 556 IPR002913 GO:0008289
Pste5g01594 817 SMART HOX_1 119 182 IPR001356 GO:0003677
Pste5g01594 817 SUPERFAMILY Bet v1-like 577 804 - -
Pste5g01594 817 SUPERFAMILY Bet v1-like 325 556 - -
Pste5g01594 817 Pfam Homeodomain 121 176 IPR001356 GO:0003677
Pste5g01594 817 ProSiteProfiles 'Homeobox' domain profile. 118 178 IPR001356 GO:0003677
Pste5g01594 817 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 117 814 IPR042160 -
Pste5g01594 817 FunFam Homeobox-leucine zipper protein HDG1 108 194 - -
Pste5g01594 817 Coils Coil 172 207 - -
Pste5g01594 817 MobiDBLite consensus disorder prediction 81 128 - -
Pste5g01594 817 SUPERFAMILY Homeodomain-like 104 178 IPR009057 -
Pste5g01594 817 ProSitePatterns 'Homeobox' domain signature. 153 176 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01594 Pste-Chr5 10146778 10152530 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01594 1 817 Homeobox Transcription Factor Family AT3G61150 65.311 0.0 1047
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pste5g01594 START 3.9e-54 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01594 5 10146778 10152530 Pste5g01594 5 10146778 10152530 ECH