Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01566 TACGAAACCTAGCACACAGCTCCTTCACTGTTATTGAATTTTCGGAAGAACAAAGAAAAATTTTTGACGATGTTTTCGTGTACCCTTTGTCGTGATTAAGCAGAAATCGATGGGGGTTGGTGGAAATTTCTGGGACCTATTGAAACCCTATGCCCGCAACGAGGGTTTTGATTTCTTGAGGAACAAGCGAGTTGCTGTGGATCTTTCCTTCTGGATTGTTCAGCACGAGAATGCCATTAAGGCCCATGTCAGAAAACCGCACCTCAGACTTACCTTCTTCCGTACCATCAATCTCTTCTCCAAGTTTGGAGCATTTCCTGTGTTCATTGTTGATGGGACTCCATCACCGATGAAATCACAGGCCAGGATTGCGAGATATTTCCAGTCTTCTGGCATTGAATTAACTAGTTTGCCAGTGCCCAAAGAAGGTGTTTCAGCTCAGAGGAACCAATTGTTTTCAAGTCGTGTTCAAGAATGTGTGGAACTGGTTGAACTACTAGGAATGCCTGTACTAAGGGCTAAAGGAGAGGCTGAAGCACTCTGCGCTCAATTAAATAGTGAAGGTCATGTAGATGCTTGCATCACATCTGACAGTGATGCATTCCTCTGTGGGGCCAAATGCATTATAAAATGTTTCTGCCCCAACTCCAAAGAACCATTTGAATGCTACAATATGTCAGATATTGAAGCGGGGCTGGGATTGAAGAGGAAACACTTAATAGCTATCTCACTTTTGGTTGGAAATGATCATGCTATGAATGGTGTTCGAGGGATTGGGCTTGATAATGCACTTCATTTTGTTAAAGCTTTTAGCGAAGATGATGTATTGAATAGGTTACGTGAGATAGGCAAAGGGAATATTTCACTAATTCCCGTCTGCATTAAATTTGACAACAATATGGATATGGATGGGACCTCCCTAAACAGAAAACAACCTCATTGCTCATTCTGCGGTCATCCAGGCAGTAAAAAAGAACATATGAAATTTCCCTGTGGATATTGTGTCATAAAGGTTGGTGAAGGTTGCCAGAGAAAACCAAAGAGTTTTAAATGTGATTGCTTATCCTGTGGTAAGAATAGGAGACATAGGGAGCAACAAAGACTGGAAAACTGGCATGCAAAAATTTGTCACAAGATTGCTGAGGAACCAAACTTTCCCAAGGATGAAATTATTGATATGTATTTATGCAATGACAACGGTTACTTTTCAGCAAGTGATGGTCCTCACATTACATGGGGAAAGCCAAACATTGATATGCTGATTGATTTTTTAAAGTTCCATCAGCATTGGGAACCTTCCTACATTCGGAGAACAATGTTTCCTATGATGTCCACCATCTTTTTGAGAGACATGACTACAGCTACAGTAGAAACGTTGGTATTTGGGCAATACGAGTTTGACTCTGTAGAACGTGTGAAGATGAGATATGGATTTCAGTATTATGTGGTTAAGTGGAAACATGCAGGGGGGAACATTGCTTATAAAATTCCATCAAAGGAATCAAGTGTGCAACAAGATGCTATAGGGCTTGATGAAACAGCGGATCCACTAGATGACTGTGATGCTCCTGAGATTCATGTGGATGATGGGTGTAGTTTTCTGCTCACAGATGAAAATGTGGACCTCGTAGGGGCTGCTTTTCCAGAAAAAGTCCAAAAGTTTTGGCAGGAGCAGGAGGTGAAAAGAAGAAAGAATTCGACATCAAGACCTGAAGAAAATGAAAAGTCAGCAACACCAAACTCAAGAAGCATTCAGCTAAACATTACTGAGTTCTACCCATCAGCAAAACTTAAACATCGGCAATCAAAACAAGGAGAAGGGTCATCCAAGAATAGGAAAATGTCAAGTCCTGACAGAATTCCAAAATCTGTGAGGCGCCGCCTCTTATTTGACTAGAGTAGTGTGTAGTATGTATATATATATATATAGGTTGAGTTTTGGAGTCACTAACATTAATAGAAAGTATTGAAGCAGTGAAAATAGAGTTGTACG 1993 0.4069 MGVGGNFWDLLKPYARNEGFDFLRNKRVAVDLSFWIVQHENAIKAHVRKPHLRLTFFRTINLFSKFGAFPVFIVDGTPSPMKSQARIARYFQSSGIELTSLPVPKEGVSAQRNQLFSSRVQECVELVELLGMPVLRAKGEAEALCAQLNSEGHVDACITSDSDAFLCGAKCIIKCFCPNSKEPFECYNMSDIEAGLGLKRKHLIAISLLVGNDHAMNGVRGIGLDNALHFVKAFSEDDVLNRLREIGKGNISLIPVCIKFDNNMDMDGTSLNRKQPHCSFCGHPGSKKEHMKFPCGYCVIKVGEGCQRKPKSFKCDCLSCGKNRRHREQQRLENWHAKICHKIAEEPNFPKDEIIDMYLCNDNGYFSASDGPHITWGKPNIDMLIDFLKFHQHWEPSYIRRTMFPMMSTIFLRDMTTATVETLVFGQYEFDSVERVKMRYGFQYYVVKWKHAGGNIAYKIPSKESSVQQDAIGLDETADPLDDCDAPEIHVDDGCSFLLTDENVDLVGAAFPEKVQKFWQEQEVKRRKNSTSRPEENEKSATPNSRSIQLNITEFYPSAKLKHRQSKQGEGSSKNRKMSSPDRIPKSVRRRLLFD 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01566 595 SMART xpgn3 1 96 IPR006085 GO:0004518
Pste5g01566 595 Pfam XPG I-region 131 213 IPR006086 GO:0004518
Pste5g01566 595 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 544 IPR006084 -
Pste5g01566 595 Gene3D - 3 197 - -
Pste5g01566 595 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 127 144 IPR006084 -
Pste5g01566 595 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 25 39 IPR006084 -
Pste5g01566 595 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 70 89 IPR006084 -
Pste5g01566 595 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 148 168 IPR006084 -
Pste5g01566 595 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 203 218 IPR006084 -
Pste5g01566 595 FunFam Flap endonuclease GEN-like 1 198 255 - -
Pste5g01566 595 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 198 414 IPR036279 -
Pste5g01566 595 CDD PIN_GEN1 2 202 - -
Pste5g01566 595 SMART xpgineu 128 198 IPR006086 GO:0004518
Pste5g01566 595 SUPERFAMILY PIN domain-like 6 213 IPR029060 -
Pste5g01566 595 MobiDBLite consensus disorder prediction 522 595 - -
Pste5g01566 595 MobiDBLite consensus disorder prediction 560 595 - -
Pste5g01566 595 FunFam Flap endonuclease GEN-like 1 2 197 - -
Pste5g01566 595 Gene3D - 198 256 - -
Pste5g01566 595 Pfam XPG N-terminal domain 1 88 IPR006085 GO:0004518
Pste5g01566 595 MobiDBLite consensus disorder prediction 536 554 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01566 1 232 Core DNA Replication Machinery Family AT5G26680 28.125 6.56e-15 75.1