Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01547 ATGGTGGAAGATGGTGATGAGGTTGCAGTTGATGCGCGTTCCACAGAAGACTGGTTGTTGCATGCACAGGAACTTGTTCCTGTTGTCCTTGATAAGGCAAGAGAGGTTAAGGGATTTGCTGGCAGATGGAAGATGATCATTGGAAAATTGGAACAGATCCCATCACGATTATCAGATTTGTCGAGTCATCCATGCTTCTCAAAGAATGCTCTTTGCAAGGAGCAGTTGCAGGCTGTGTCAAAGACACTTGGGGAAGCAATTGAATTGGTTGAGTTGTGTATGAAGGAGAAGTATGAGGGTAAGCTTAGGATGCAGAGTGATCTAGATGCATTGGCTGGGAAGATTGATCTGAATTTGAGGGATTGTGGACTTTTGATCAAGACTGGTGTGCTTGGTGAGGCTACTTTACCGTTGGCTGTGTCTAGTTCTGTGGCAGAATCAGATGTTGCAATGCATAACAACATTAGGGAATTGCTGGCACGCCTTCAGATTGGACACTTGGAAGCAAAGCACCGAGCTTTAGACTGCGTTGTTGAGGCCATGAAGGAAGATGAGAAGAGTGTTTTAGCTGTTCTTTGTCGGAGCAACATTGCTGCTTTGGTTCAATTGCTTACAGCTACCTCTCCCAGGATCAGAGAGAAAGCAGTTACTGTTATATGCTCGCTTGCAGAATCCGGTAGCTGCGAAAATTGGCTAGTTTCTGAAGGAGTTCTGCCTCCTCTTATAAGGCTTGTTGAATCTGGCAGCGCGGTGGGGAAGGAGAAGGCCACAATATCCCTTCAAAAGCTGTCAATGTCAGCTGAAACAGCCCGAGCAATCGTGGGACATGGTGGGGTTCGGCCGTTGGTTGAACTTTGTCAAACTGGGGATTCTGTGTCACAGGCGGCCGCTGCATGTACTCTGAAGAACATATCAGCTGTGCCTGAGGTGAGACAAGCTTTGGCTGAAGAAGGGATTGTGAGGGTTATGATCAATCTACTTAACTGCGGAATTCTGTTAGGTTCCAAAGAGCATGCTGCAGAATGCTTGCAGAACCTCACTGCGAGCAATGAGAATCTAAGGAGGAGTGTCGTATCAGAAGGTGGTGTTAGGAGTCTTCTGGCATATCTAGATGGTCCACTTCCTCAGGAATCCGCGGTTGGAGCATTGAGGAATTTGGTTGGATCAGTTCCTGAGGAATCCTTGGTTTCCCTTGGTTTGATCCCCCGTTTGGTTCACGTGTTGAAGTCCGGATCCTTAGGTGCTCAGCAAGCAGCCGCTGCTGCAATTTGCCGGGTTTGCAGCTCCACAGACATGAAGAAAATAGTTGGTGAAGCAGGTTGCATCCCTCTCCTTGTGAAGATGCTTGAGGCCAAGTCAAACAGTGCTAGAGAGTTTGCTGCTCAAGCTATTGCTAGCTTGATGGGTGTGTCTCATAATCAGAGAGAGGTTAAGAAGGATGATAAAAGTGTGCCAAACTTGGTTCAGTTGCTTGATCCAAGTCCTCAGAACACAGCAAAAAAATATGCAGTTACTTGCCTTGGATCACTTTCTTCAAGTAAAAAATGTAAGAAGCTAATGATCTCATATGGGGCAATCGGTTATCTGAAGAAACTTACTGAGATGGACATTCCAGGAGCTAAGAAGCTGCATGAACGGTTGGAAAGAGGGAAATTAAGAAGTTTGTTTAGCAAGAAATAA 1680 0.4607 MVEDGDEVAVDARSTEDWLLHAQELVPVVLDKAREVKGFAGRWKMIIGKLEQIPSRLSDLSSHPCFSKNALCKEQLQAVSKTLGEAIELVELCMKEKYEGKLRMQSDLDALAGKIDLNLRDCGLLIKTGVLGEATLPLAVSSSVAESDVAMHNNIRELLARLQIGHLEAKHRALDCVVEAMKEDEKSVLAVLCRSNIAALVQLLTATSPRIREKAVTVICSLAESGSCENWLVSEGVLPPLIRLVESGSAVGKEKATISLQKLSMSAETARAIVGHGGVRPLVELCQTGDSVSQAAAACTLKNISAVPEVRQALAEEGIVRVMINLLNCGILLGSKEHAAECLQNLTASNENLRRSVVSEGGVRSLLAYLDGPLPQESAVGALRNLVGSVPEESLVSLGLIPRLVHVLKSGSLGAQQAAAAAICRVCSSTDMKKIVGEAGCIPLLVKMLEAKSNSAREFAAQAIASLMGVSHNQREVKKDDKSVPNLVQLLDPSPQNTAKKYAVTCLGSLSSSKKCKKLMISYGAIGYLKKLTEMDIPGAKKLHERLERGKLRSLFSKK 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01547 559 Gene3D - 334 542 IPR011989 -
Pste5g01547 559 Pfam Armadillo/beta-catenin-like repeat 270 306 IPR000225 GO:0005515
Pste5g01547 559 Gene3D - 145 333 IPR011989 -
Pste5g01547 559 SMART arm_5 184 224 IPR000225 GO:0005515
Pste5g01547 559 SMART arm_5 471 512 IPR000225 GO:0005515
Pste5g01547 559 SMART arm_5 429 469 IPR000225 GO:0005515
Pste5g01547 559 SMART arm_5 307 348 IPR000225 GO:0005515
Pste5g01547 559 SMART arm_5 389 428 IPR000225 GO:0005515
Pste5g01547 559 SMART arm_5 266 306 IPR000225 GO:0005515
Pste5g01547 559 SMART arm_5 349 388 IPR000225 GO:0005515
Pste5g01547 559 SUPERFAMILY ARM repeat 155 536 IPR016024 -
Pste5g01547 559 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 13 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01547 Pste-Chr5 9864372 9866051 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01547 336 529 U-box Gene Family AT3G54790 29.293 1.22e-08 55.8