Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01545 ATGTTGAATGATGCTAGGAAAAGGGTAAGAAATGAAGTTAATGATGCAGAAAGAAACGGAGAAGAAATTGAATATGACGTTCAACATTGGTTAAAACAAGTGGATCAGAAGATAACACAATATGAAAGTTTTGTTCATGATGAACGCCATGAAAAAACAAGGTGTTCCATGGATTTCTTTCCAAATAACTTACAGTTGAGGTATCGGTTAGGGAGAAATGCTACAAAGATGATAGAGGAAATCAAAGAAGGTGGGCTTTTTAATAAAAAGTTTGATAAAGTTTCCTATCGGGTGGGCCCAACAATTGATGCGGCTTTGTCAAACATTGGTTATGAAAACTTTGGATCGAGAAACAAAACTTTGGAGATGATTATGAAAGCAGTGGAAGACTGTACAATTAATATGATTGGAGTTTATGGGGTCAGTGGTGTGGGTAAGACCACTTTAGTTAAAGAAGTTTCTAACAAAGTTAAAGAAAAGAAGCCATTCAATATGGTGGTTATGGCAAGTATAACAAGCAATCCTAACATAAAAGAAATTCAAGGACAAATTGCTGAGATGTTAGGAATGAGATTGGAAGAGGAAAGTGAGATTGTAAGGGCAGATCGCATTCGAAAGAGGTTAAAGAAAGAAAATGATAAAACTCTTATAATCTTAGATGATCTCTGGCATGGGTTGGACTTGAATAGACTGGGAATTCTATGTAGTGATGATGATGACAATCAGATAGAAAAAGAAAAGTTATCTATCAATTTCAATAAGATGGAAAAAGAAAAGTTATCTATCAATTTCAGTAAGGTGAAAAAAGAAAAGTTATCCGAAAGAGGCTACCTAAACTGTTCTGAATTTGATGTGCAAGCCTTTGAAATTGCCAAAATGTGTGCTGGATTGCCCGTAGCATTAGTTTCCATAGGAAGGGCACTAAAGAATAAGAGCTCTTTTGAATGGAATGATGTCTGCCGACAAATTAAAAGCCAAAGTTTTACAAGAGGGCAAGAATCAGTTGAGTTCTCTGTAAAGTTGAGCTATGATAATTTAAAAGATGAGCAACTTAAGCATATATTTTTACATTGTGCTAGAATGGGAAATGATCCATTGATTATGGACTTGATGAAGTTCAGTATTGGTTTTGGTTTGCTTCAAGGAATTCATACTATTAGAGAAGCGAGAGATAGAGTAAACGTGTTGATACAAGAGCTAAAAGAATCAAGTTTGTTGGTGGCAAGTTACTCCTCTAACCGCTTCAACATGCATGACATTGTGCGTGATGTCGCTCTATCAATATCATCCAAAGAAAAGCATGTACTTTTCATGAAAAATGGCATACTAGATGAATGGCCTAATGAAGATGAACTTGAAAGGTGCACTGCTATATTTTTGCACTATTGCGACATTAATGATGAGCTTCCTGATAGTATATATTGTCCTAGACTTGAAGTCTTACATATTGATAATAAGAATGAATTTTTGGAAATACCAGACAACTTTTTTAAAAATATGATTCAACTTAGAGTATTGGTATTGACTGGTTTTAGTCTATCATGCTTACCCTCTTCCATTAAATACCTAAAAAAACTGCGAATGCTAAGTTTGGAGAGATGCACTTTAGGAAGCAACTTATCAATCATTGGAGAGTTGAAGAAAATACGAGTTCTTACTCTTTCAGGATCCAACATTGAAAGTTTGCCTCTAGAATTTGGGAAATTAGATAAGTTGCAACTTTTTGACTTAAGCAATTGTTCAAAACTTAGAGTAATACCTTCCAATATCATATCAAGGATGAAAAATTTGGAGGAGTTTTATATGAGAGATAGCTTGATTCTATGGAAGAACGGGGATAATGTCCAAAATGGAAATGCTAGTCTTTCTGAGTTGAGGCACTTGAATCAGTTGCAAAATCTAGACATACACATTCAGAGTGTGACCTATTTTCCACAGAACTTGTTTTTTGACATGTTAGATAGTTACAAGATTGTCATTGGTGAACTCAACATGCTTACAATGGAAGAATTCAAAATTCCTGAGAAGTATGAATTGGAGAAGTTTTTAGCTTTGAACTTAAAAGAAGGTATTGATATTCATTCTAAAATGTTGTTCAAAAGTGTTGAATATTTAGTGCTGGGAGAACTCAATGAT 2136 0.3436 MLNDARKRVRNEVNDAERNGEEIEYDVQHWLKQVDQKITQYESFVHDERHEKTRCSMDFFPNNLQLRYRLGRNATKMIEEIKEGGLFNKKFDKVSYRVGPTIDAALSNIGYENFGSRNKTLEMIMKAVEDCTINMIGVYGVSGVGKTTLVKEVSNKVKEKKPFNMVVMASITSNPNIKEIQGQIAEMLGMRLEEESEIVRADRIRKRLKKENDKTLIILDDLWHGLDLNRLGILCSDDDDNQIEKEKLSINFNKMEKEKLSINFSKVKKEKLSERGYLNCSEFDVQAFEIAKMCAGLPVALVSIGRALKNKSSFEWNDVCRQIKSQSFTRGQESVEFSVKLSYDNLKDEQLKHIFLHCARMGNDPLIMDLMKFSIGFGLLQGIHTIREARDRVNVLIQELKESSLLVASYSSNRFNMHDIVRDVALSISSKEKHVLFMKNGILDEWPNEDELERCTAIFLHYCDINDELPDSIYCPRLEVLHIDNKNEFLEIPDNFFKNMIQLRVLVLTGFSLSCLPSSIKYLKKLRMLSLERCTLGSNLSIIGELKKIRVLTLSGSNIESLPLEFGKLDKLQLFDLSNCSKLRVIPSNIISRMKNLEEFYMRDSLILWKNGDNVQNGNASLSELRHLNQLQNLDIHIQSVTYFPQNLFFDMLDSYKIVIGELNMLTMEEFKIPEKYELEKFLALNLKEGIDIHSKMLFKSVEYLVLGELND 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01545 712 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 358 IPR027417 -
Pste5g01545 712 SUPERFAMILY L domain-like 417 650 - -
Pste5g01545 712 Gene3D Ribonuclease Inhibitor 467 709 IPR032675 -
Pste5g01545 712 Gene3D - 258 352 IPR042197 -
Pste5g01545 712 SMART AAA_5 132 256 IPR003593 GO:0016887
Pste5g01545 712 PRINTS Disease resistance protein signature 135 150 - -
Pste5g01545 712 PRINTS Disease resistance protein signature 294 308 - -
Pste5g01545 712 PRINTS Disease resistance protein signature 567 583 - -
Pste5g01545 712 PRINTS Disease resistance protein signature 209 223 - -
Pste5g01545 712 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 2 710 - -
Pste5g01545 712 Gene3D - 109 248 IPR027417 -
Pste5g01545 712 Pfam NB-ARC domain 122 345 IPR002182 GO:0043531
Pste5g01545 712 Coils Coil 191 211 - -
Pste5g01545 712 Coils Coil 6 26 - -
Pste5g01545 712 Pfam Leucine rich repeat 476 535 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01545 Pste-Chr5 9833261 9835524 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01545 112 590 WRKY Transcription Factor Family AT5G45050 25.217 7.06e-06 47.8