Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01543 ATGAAACCCAAAAACTCAAGCACTCAGTTGAGAGCACTTGTTGTAGATGACGATAGGGTCATCCAAAAGACTCATGAAGGACTGTTGAAAAAAGTAGGAGTGAAAAATCACACTGCTGTGGAAAATGGCAAAAAAGCCGTTGACCTTCATTGCAATGGTGAAAGATTTGATCTAATTCTCATTGACAAGGACATGCCTGTCATGAATGGAATTGAGGCAACAAAGAAACTTCGTTCAATGGGTATTTGTAACAGGATTGTTGGTGTGTCTTCATTATGCGATACAGAGAACATACAACAATTTTTGCTAGCAGGGATAGATGAGTACTACAAAAAACCCTTGACCGTTAAGACGCTTAAAGCAATTCTTGATAATATCGAGTCATAA 387 0.3824 MKPKNSSTQLRALVVDDDRVIQKTHEGLLKKVGVKNHTAVENGKKAVDLHCNGERFDLILIDKDMPVMNGIEATKKLRSMGICNRIVGVSSLCDTENIQQFLLAGIDEYYKKPLTVKTLKAILDNIES 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01543 128 Coils Coil 116 128 - -
Pste5g01543 128 CDD REC_hyHK_CKI1_RcsC-like 13 123 - -
Pste5g01543 128 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 127 - -
Pste5g01543 128 ProSiteProfiles Response regulatory domain profile. 11 127 IPR001789 GO:0000160
Pste5g01543 128 SUPERFAMILY CheY-like 9 126 IPR011006 -
Pste5g01543 128 Gene3D - 1 128 - -
Pste5g01543 128 SMART REC_2 10 123 IPR001789 GO:0000160
Pste5g01543 128 Pfam Response regulator receiver domain 13 123 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01543 Pste-Chr5 9827033 9827610 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01543 10 115 Response Regulator Gene Family AT3G04280 45.370 2.77e-24 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste5g01543 Response_reg 2e-19 CL0304