Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01538 ATGGAAGGAAAAGAAAAAGACAAAGGTAAAGAAGTAGTGAAACCTGAGAGTTCATGTTCTAGATTAAGAGTACTTGTAGTAGATGACACTAGGACGGTCATATTCACCTATATAAAGATGTTTGAAAAAATTGGTATAAAAAATCTTAGTGCTGCGGCAAATGGTCAAGAAGCTGTGGAGCTTTATGGCAATGGTCAAAGTTTTGACTTGATTCTCATGGACAAGAACATGCCTGATATGGATGGAATAGAGGCTACTAAGAAACTTCGTACAATGGGCTTTGGTGGTAAAATCATTGGTGTGTCCTCGTCAACCCGTGAAGCGCATTATGTACAAGAATTTGTTGATGCAGGACTAGATGGCTACTATAGAAAACCCTTGACGGAAGACCAGCTTAAGGAGATTGTTGAAGACTTTTTAATATAA 426 0.3803 MEGKEKDKGKEVVKPESSCSRLRVLVVDDTRTVIFTYIKMFEKIGIKNLSAAANGQEAVELYGNGQSFDLILMDKNMPDMDGIEATKKLRTMGFGGKIIGVSSSTREAHYVQEFVDAGLDGYYRKPLTEDQLKEIVEDFLI 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01538 141 CDD REC_hyHK_CKI1_RcsC-like 24 136 - -
Pste5g01538 141 Gene3D - 2 139 - -
Pste5g01538 141 SUPERFAMILY CheY-like 20 140 IPR011006 -
Pste5g01538 141 ProSiteProfiles Response regulatory domain profile. 23 140 IPR001789 GO:0000160
Pste5g01538 141 SMART REC_2 22 136 IPR001789 GO:0000160
Pste5g01538 141 Pfam Response regulator receiver domain 24 136 IPR001789 GO:0000160
Pste5g01538 141 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01538 Pste-Chr5 9804506 9805050 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01538 3 132 Response Regulator Gene Family AT3G04280 41.045 2.26e-20 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste5g01538 Response_reg 1.1e-23 CL0304