Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01509 CACGAACCGCAACTCTCTTTCTCTCTAACATGGACCAACACCAGCGCCACGTCACCACCTCCACCACTAACAATCTCGTGCTCCGCTGCCCCGCCGTGCGCGCCTTCCCCTTCGCCAGCCTCCTCGCCGCCTCCCGCCGCCGCCTCTTCCTCTCCGACTGCGCCGACCGCCGATCTGACCACGATGCTGACGCCGCCGCCGACTGCGCCTACTCGCGCCCCGTCCTCCTCCTCGACATGCTCTGGAACCTCGCCTTCGTCCTCGTCGCCGCCGTCGTCCTCCTCTCCACTCTCCCAGAACGCCCCTCCACGCCGCTCAGGCTCTGGCTCTCCGGCTACGCCTTCGAGTGCGTTCTTCACATGGCTTTCGTTTACTTCGAGTTCCAAACCGGACTTCGCGATTCCTTCTCTCACACTACCTATGCCCTTGTTAGGAAGTTAGAGCCTATGAACACTCTGGCATCGTCTGTTTGGTGGGTGTTTGGATTTTATTGGATTGTTGTTGGTGGTCAAGCACTTTTGGAAGATTCTCCTCGTCTCTATTGGTTAACGGTGGTCTTTCTAGCCTTTGACGTATTTTTTATTATCTTTTGTATTGGGATGGCATGTATAGTTTTCTTTGCTCTGTTCTGCATCATCCCAATAATAGCGCTAGCTTATGCTATGAGAATCAGAGAAGGTGCATCAGAAGAAGATATCAGGTCACTTCCTATGTATAGGTTTAGTCAGTCAAATTCATTGGTGGCAGTTGATGATAACATGAAGCAACATGTTAAAGGAAGTGGAGATTCGTGCAATGGAAGTCATATGAGTGAACTTTCTCTCCATCCAGATGATTCTGAATGTTGTATCTGCCTTTGTCCATATGTTAATGGAGCAGAACTGTATCGCCTTCCCTGTACCCACCATTTCCATTGTGAATGCATTGCCCGTTGGCTAAGGACAAAAGCAACCTGCCCACTCTGCAAATTTAATCTCCTTAGAGGTGATACACTGGTTTGACCTTTCCGAGGGAAAGATTGGACAACGGTGAGGTGCATTATTGCTCAAAATGGACATGACTCGATTGCAGAAACATTCGGTACTCAGCTGACTAGTGTTGGTAAATAATAACTGGAAAAGAAAAGGAAATGCTCCACCCTTTCAGCTTTTACTGGGTGTTCTAGTCTTAGGATTAGTTTCCATAAAGCTCTTGCATCTTTTAGTACAAAATGTTCTTAATTTTATGATGGGGAATGTTGTATATATTGTCAAACCTTGGAGAGGGTCTCCCCATAGTTTGTACTTACAAGGGGGTTTTTATAAAACCGATTTTTCTGTACAGAAATCCATTTTTGTTAGTAGTGTACTTACCTTCACCATCAAATAAATTAGAGATGTACAGTCCTTAAACCTTGAAAATAGTGGAATCACAATGGGAGAAGGGAGGCTACTTGGCTAGGAACCGAAGCAAAAGTTATATTTGTGTTTGATATTTAACGTACCATTAGATGTTTTATATTGTATTTGGCCATTTGATTGGGAACTA 1527 0.4604 MDQHQRHVTTSTTNNLVLRCPAVRAFPFASLLAASRRRLFLSDCADRRSDHDADAAADCAYSRPVLLLDMLWNLAFVLVAAVVLLSTLPERPSTPLRLWLSGYAFECVLHMAFVYFEFQTGLRDSFSHTTYALVRKLEPMNTLASSVWWVFGFYWIVVGGQALLEDSPRLYWLTVVFLAFDVFFIIFCIGMACIVFFALFCIIPIIALAYAMRIREGASEEDIRSLPMYRFSQSNSLVAVDDNMKQHVKGSGDSCNGSHMSELSLHPDDSECCICLCPYVNGAELYRLPCTHHFHCECIARWLRTKATCPLCKFNLLRGDTLV 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01509 323 Pfam Ring finger domain 271 313 IPR001841 -
Pste5g01509 323 SUPERFAMILY RING/U-box 265 317 - -
Pste5g01509 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 250 317 IPR013083 -
Pste5g01509 323 PANTHER TARGET OF ERK KINASE MPK-1 54 316 - -
Pste5g01509 323 SMART ring_2 272 312 IPR001841 -
Pste5g01509 323 ProSiteProfiles Zinc finger RING-type profile. 272 313 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01509 Pste-Chr5 9626378 9631848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01509 9 320 C3H Transcription Factor Family AT1G68070 42.604 1.74e-87 264