Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01502 GGTCATGGCTTTCGAAAGAACCTTTTTCAAATGGTGGAAAATTTGAAACCAAAATTTCTCAGATTTCCAGGAGGTTGTTATGTTGAAGGAGATTATCTGAAAAATCAATTTCAATGGAAAGATACCGTTGGATCATGGGAGGATAGACCTGGACACTATGGTATTTGGAACTATTGGAGTGACGATGGATTTGGTTTTTTAGACTCGCAGAGGACCTTGGAGCAATGCCGATATGGGTGTTTAATGCTGGCCGCTCTAGATGGCATTGAATTTGCAAGTGGCTCTCCTACATCAACATGGGGTTCTCTTAGAGCTGCAATGGGACATCCTGAACCGTTTGACTTGAGATATGTTGCAGTTGGACATGAAAATTGTGGTAATGAAATTACCTTAAGTTCTGAGGCTATAAGATCTGCCTACCCGGATATTCAAATTATATCAAATTGCGATGCTTCTAGCGGACCATTAAATCATCCAGCTGATTTGTTCGATTTTCATGTAACCTACATAACGATCTTACAGTACTACTTGAACTTTCAATTTGTTGATTTGACTTTAGAAAGTACATATACAAGCGCAGATGGTATGTTTTCTCTGTCTACTAAGTTCGACCACGTACACATCACGATCTGGACCAAAGATGCTGCAAATGAAAGTCTTTTAGCTGCTGTGGCTGAAGCTGCATTTATTATTGGACTAGAAAAGAACAGTGGAGCAACATTTCTTGATTCAACACTCACTACAACTTCATCTAATAAACTTATTGCATCGGCAATCATTTGGCAAAATTCAGCAAAGAGGAAAAATTATCTAAGAATAAAGGTAGTAAACTTTGGAACAACCACTGAAAGCCTTAACATCTATGTAAACGGGTTGAACTCAGATGTGCACCAATATGGATCTACAAAGACAGTGCTTACATCAACCAATATAATGGTTGAGAATTCCTTCTTAAAACCGAAGAAGACTTCAACTTTGGTTGTAGATGCTTCTGATTTATCTGGAAGGCCAATTCCTGATACTCTTTTTGGAATATTTTTTGAGGAGATCAATCATGCAGGTGCTGGTGGATTGTGGGCAGAGCTTGTGAACAACCGAGGTTTTGAAGCTGGGGGCACACAAGTTCCATCAAATATTGCACCTTGGACTATAGTAGGACACGAATCCGCTATTTTCCTACAAACAGAACTTAGTTCTTGCTTCGAACGCAACAAGGTTGCATTAAAAATGGATGTGGTGTGTGAAAATTGCCCTTCTGGTGGTGTTGGTGTCTCTAACCCGGGATTTTGGGGCATGAACATTGTGCAATGGAAGAAATACAAAGTTGTCTTCTTTGTTACATCAACTGGATCACTAGACATAACAGTATCATTCCGAAAAAATGAAGATGGAGGGATATTGGCTTCTAGAAATATCAAAGCTTCTGCATCAGAAGTTTCGAACTGGAAAAGGATGGAAACTATATTGGTAGCTGATGCATCATGTTCCAATTCATCTTTGTATTTAACAACTACCAAAAAAGGTGGCTGTTTTATTGAAGGAGAAACATTAAGAAATGCATTTCGGTGGAAAGACAGTGTTGGACCCTGGGAAGAGAGACCTGGGCACTTTGGTGATGTATGGAGTTATTGGACAGATGATGCATTTGGTTATTTTGAGGGTCTTCAACTAGCAGAGGACATTGGTGCAAGGCCATTGTGGGTATTTAATAATGGCATCAGCCATACTGATGAAATAGACACAAGGGTCATCACACCTTTTGTTCAAGAAGCCCTTGAAGGTATTGAGTTTGCCAGAGGTGCAGCTACTTCAAAATGGGGTTCCCTAAGAGCATCTATGGGGCACCCAGAGCCTTTCGACCTAAAATATGTTGCCATTGGAAATGAAGATTGTTGGAAGAAAAACTACCGAGGAAGCTACCTAGCTTTCTACTATGCAATACGACATGTTTATCCAGATATTCAAATTATTTCAAACTGTGATGCTTCGTCCAAACCGTTAGATCACCCAGCCGATATCTATGATTATCACACTTATCCTCTTGACTCTCAAATTATGTTTAATAACGCTCGTGTGTTTGATAAGACACCACGAAATGGTCCAAAGGCTTTTGTGAGTGAGTATGCTCTAATTGGAAACAAACAAGCTAAGTTTGGAACCCTTTTGGGTGCTGTGTCCGAAGCTGGATTCCTTATTGGATTAGAAAGAAACAGGTGGAACCCAGATGCAATTGTTTATGGAACTCCAAGCTATTGGGTGCAGTTGATGTTTAGGGAGTCAAATGGAGCAACACTTCTCAGATCACAACTTCAAACACCTGACCCTAATTTTGTTGCTGCATCTGCTATTCTATGGAAAAATCCACAGGATAAGAAAACTTACTTAAAAATAAAGGTTGCAAACGTGGGGAACAAACAAGTAAATCTCAAGATTTCTCTAAACGGATTTGAGAGCTCAAATACAACTAAGCCGGCAAAGACAGTGCTCACATCTGCAGATGCATTAGATGAAAATAGCTTCGCAAACCCAAAAAAGATAGTACCAAAGAGAAATCCACTTCAGAGTTATAGCAACGAGATATATGAAATACTTCCTCCAGTTTCATTGACA 2610 0.3958 GHGFRKNLFQMVENLKPKFLRFPGGCYVEGDYLKNQFQWKDTVGSWEDRPGHYGIWNYWSDDGFGFLDSQRTLEQCRYGCLMLAALDGIEFASGSPTSTWGSLRAAMGHPEPFDLRYVAVGHENCGNEITLSSEAIRSAYPDIQIISNCDASSGPLNHPADLFDFHVTYITILQYYLNFQFVDLTLESTYTSADGMFSLSTKFDHVHITIWTKDAANESLLAAVAEAAFIIGLEKNSGATFLDSTLTTTSSNKLIASAIIWQNSAKRKNYLRIKVVNFGTTTESLNIYVNGLNSDVHQYGSTKTVLTSTNIMVENSFLKPKKTSTLVVDASDLSGRPIPDTLFGIFFEEINHAGAGGLWAELVNNRGFEAGGTQVPSNIAPWTIVGHESAIFLQTELSSCFERNKVALKMDVVCENCPSGGVGVSNPGFWGMNIVQWKKYKVVFFVTSTGSLDITVSFRKNEDGGILASRNIKASASEVSNWKRMETILVADASCSNSSLYLTTTKKGGCFIEGETLRNAFRWKDSVGPWEERPGHFGDVWSYWTDDAFGYFEGLQLAEDIGARPLWVFNNGISHTDEIDTRVITPFVQEALEGIEFARGAATSKWGSLRASMGHPEPFDLKYVAIGNEDCWKKNYRGSYLAFYYAIRHVYPDIQIISNCDASSKPLDHPADIYDYHTYPLDSQIMFNNARVFDKTPRNGPKAFVSEYALIGNKQAKFGTLLGAVSEAGFLIGLERNRWNPDAIVYGTPSYWVQLMFRESNGATLLRSQLQTPDPNFVAASAILWKNPQDKKTYLKIKVANVGNKQVNLKISLNGFESSNTTKPAKTVLTSADALDENSFANPKKIVPKRNPLQSYSNEIYEILPPVSLT 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01502 870 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 236 324 - -
Pste5g01502 870 Gene3D Glycosidases 1 271 - -
Pste5g01502 870 Gene3D Glycosidases 507 757 - -
Pste5g01502 870 SUPERFAMILY (Trans)glycosidases 508 766 IPR017853 -
Pste5g01502 870 Pfam Alpha-L-arabinofuranosidase C-terminal domain 742 866 IPR010720 GO:0046373|GO:0046556
Pste5g01502 870 SUPERFAMILY (Trans)glycosidases 2 241 IPR017853 -
Pste5g01502 870 SUPERFAMILY Glycosyl hydrolase domain 748 870 - -
Pste5g01502 870 Gene3D - 758 870 IPR013780 -
Pste5g01502 870 SMART alpha_l_af_c 706 868 IPR010720 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01502 Pste-Chr5 9587493 9611245 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01502 320 870 Glycoside Hydrolase AT3G10740 55.161 0.0 660