Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01484 AGTCTTCTTTAGAGCCTTATGAAAGAATGAAGTTTGCATCGATTGACAATGCCAAGAATCACTACACAAGGTATGCAAAGAACAAAGGTTTTAGTTTTCGCATGGGTCGTATTACTAAATCAAGAACAAATGATATGCTGATTGGAGTTCCTTTGTTCAAAGGAAGGGTTTCGGGGAAAAAAAAAAAAATTGGAGAAAAGGTAAATGGAAACTTTTCAACGCATGATGAAACAAAGGTAGGATGCAAGGCAATGAGTTATATAAAGAAAAATGAAGATGGATGGATTGTTTCTAGATTTATAAGAGATCATAATCAGGAACTTTTTTCTCAAGGAAGTTCAAAAGTGAAAAAAAAACTTATTGATGTGCTTTATGACTCTGGTTTGTGCCCTAGCAAAATAGAATCTATGTTGTGTACTGAAAGTGGTGGTATTGATAATGTTGGGTTTAGCGAACAAGATGTTATCAATTACTCAAGTGAAAAGAGACAAAAACAATTGGAAAAAGGAGATGCTCAGTTGATGTTATCATATTTTACTAACTGTCAATTGAAGAATACTAAATTTTTCTATGCATTTCAAATGGATGCAGAAGGACAGTTAGCAAATTGCTTTTGGGTTGATATGAGGTCTAGAATGGCATACAAATATTTTGGTGATGTGGTTACTTTTGATCCAACATACTTAACAAATAGATATAGAATGCCCTTCGTTCCATTCACTGGAGTTAATCATCATCAACAATCCATTCTTTTTGGTTATGCTCTATTATGGGATGAAAATGAAGAAAGTTTAGTTTGTTTGTTAAATGCTGCTATCACTAATGCAATTGCAAGGGTATTCCCAAAGGTTAATCATCATTACTGTATGTGGCACATTGGGAAAAAAGTACCAGAGTACTTGAATCATATTTATCATGATCATGGTGATTTCAAAAATAAATTTTACAAGTGCATTCAATCTATCACTATTAGAGAAAATTTACTCAATTGGGAAAAATGGATTCCTACTTATGCACGTCACAATTTTGTGTTGGAATGTCCACCACCCAAAGGAGTGAAAGATTTTTTGAATTCAAATACTCCATTGAGAAAGTTTGTGACACAATATGAGAAGGCTCTTGATGCAAGTTATAACAAGGAAAGAGAGAAGACTTTTAAGACAATAAATTCAAAACCATTTTTGCGGACTTTATATCCCATGGAAGAAGAAGCATTGAAAACTTATACAAGAAAGTTGTTTAGGATATTTCAAGATGAGTTGGTTCATGAAATTTACAAAGAGAGGCCTAACTATTATGTGACTTTTCATGTTAATTCAAAAGAAGCAAATTGTAGTTGTCATATGTTTGAATTTTTGGGCCTTCTTTGTAGACATGTTCTAGTTGTTGTTATAAAGAAAAAGGTTCACTCTCTCCCTTTGCAATATATGTTACCTCGATGGACCATTAATGCTAAGAAGGGGAAAGCCAAAGGATTTACAAGTGAAGAATTCCAAGAGGGAAACAACAAAGCTTCTAGTACTTTGTTATTTAATAGTGTTATGGCTCATTATCTTGAACTATCTGAAAGAGCTTCCAGATCAGAAAGGCATCATGATGTTGCAATT 1607 0.3323 MKFASIDNAKNHYTRYAKNKGFSFRMGRITKSRTNDMLIGVPLFKGRVSGKKKKIGEKVNGNFSTHDETKVGCKAMSYIKKNEDGWIVSRFIRDHNQELFSQGSSKVKKKLIDVLYDSGLCPSKIESMLCTESGGIDNVGFSEQDVINYSSEKRQKQLEKGDAQLMLSYFTNCQLKNTKFFYAFQMDAEGQLANCFWVDMRSRMAYKYFGDVVTFDPTYLTNRYRMPFVPFTGVNHHQQSILFGYALLWDENEESLVCLLNAAITNAIARVFPKVNHHYCMWHIGKKVPEYLNHIYHDHGDFKNKFYKCIQSITIRENLLNWEKWIPTYARHNFVLECPPPKGVKDFLNSNTPLRKFVTQYEKALDASYNKEREKTFKTINSKPFLRTLYPMEEEALKTYTRKLFRIFQDELVHEIYKERPNYYVTFHVNSKEANCSCHMFEFLGLLCRHVLVVVIKKKVHSLPLQYMLPRWTINAKKGKAKGFTSEEFQEGNNKASSTLLFNSVMAHYLELSERASRSERHHDVAI 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01484 527 Pfam MULE transposase domain 212 261 IPR018289 -
Pste5g01484 527 ProSiteProfiles Zinc finger SWIM-type profile. 423 459 IPR007527 GO:0008270
Pste5g01484 527 SMART 26again6 434 461 IPR006564 GO:0008270
Pste5g01484 527 Pfam FAR1 DNA-binding domain 12 100 IPR004330 -
Pste5g01484 527 Pfam SWIM zinc finger 429 458 IPR007527 GO:0008270
Pste5g01484 527 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 525 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01484 Pste-Chr5 9499025 9500805 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pste5g01484 FAR1 5.8e-11 CL0274