Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01479 AAGAGAGTATTTGTACTGCTTTAAAATTGTACCAATGGAACACCATTTTGGTCAAGACACTACACCTGTATCTGGGTCCTTTGATAAGACTAGGGTTTTAAATGTGAAGCCATTAAGAACACTTGTTCCTGTGTTTCCTTCCCCATCTAATCCTGCTTCATCTTCAACTCCACAAGGTGGTGCCCCTTTTGTGTGTGTTTCTCCTTCTGGTCCTTTCCCTTCTGGGGTTGCACCCTTCTATCCTTTCTTTATCTCCCCAGAATCCCAGAGGCTTTCTGAACAGAATGCACAAACCCCAACTGCTCAACATGTGCCTGCAGCTCCGATATCTACTGCTGTTCCCATTAATTCATTTAGGACACCAACAGGGGCTGCAAATGGAGACGTGGGTTCATCACGAAAGAATTCCCGAAGTCGTGGACAGGTCACAGAGGAAGATGGCTTCAGTAATGTTGAGATAGACGAAATTGAAGCAGAAGAAGGAACAGGAACTGGAAGGTCAAAACGCAAGTCTCAGAAGAAGATAAAGGGACGTCAGAGTACCTGTGGTTCTGCTGAAGTTGATCCGGATGCAGTGGCTGCAGATATTCTCAAATCTCTCAATCCAATGGTTTTTGATGTACTAAATCAACCAGAAGGTAGCAGGGATTCAGTTGCATATACACTTATGGTATATGAAGTGATGCGGAGAAAGCTTGGACAAATTGAAGATTCAAATAGGGCAGCCAACTCTGGAGCTAAACGGCCAGATTTGAAGGCAGGTGCACTTATGATGAACAAAGGGATTCGAACCAACAGCAAGAAACGTATTGGAACTGTGCCTGGTGTTGAGATTGGGGATATTTTCTTTTTCAGATTTGAATTGTGCTTAGTGGGTTTGCATGCTCCCTCTATGGCTGGAATTGATTATATTGGTACCAAAACCAGTCAAGAGGAAGAGCCCTTAGCCGTAAGCATTGTCTCATCTGGAGGGTATGAAGATAATGTGGAGGATGGGGATGTGCTGATTTACAGTGGCCAAGGTGGGGTTAACCGTGACAAGGGAGCAAGTGATCAAAAGCTCGAAAGGGGTAATCTTGCATTGGAGAAGAGTGCTCATAGAGGTAATGAAGTGAGAGTAATTAGGGGTTTGAAGGATCCACAACATCCAACTGGGAAGGTATATGTCTATGATGGCCTTTACAAGATTCAAAATTCCTGGGTGGAAAAAGCAAAATCTGGTTTCAATGTATTCAAATATAAATTAGTCAGGTTGCCTGGACAGCCTCAGGCGTATATGATTTGGAAATCCATTCAACAATGGACTGAGAAATCTGTTTCAAGAGCTGGGGTTATATTGCCGGATCTTACTTCTGGGGCTGAAAATGTGCCTGTATGTCTTGTGAATGACATTGATAACGAGAAGGGCCCTGCATATTTCACTTATATCCCAACTCTCAAGAATTTAAGGCCAATTGGTCCTTTGGACTCATCTACTGGATGTTCTTGTGTTGGTGGATGTCAAGCTGCCAACTTTAACTGTCCTTGCATTCAAAAGAATGGAGGCTATCTACCATATTCTGCGGCTTCATTACTTGCAGACCTAAAATCTGTGATATATGAGTGTGGCCCTTCTTGTCAATGTCCTCCTAATTGCCGAAATCGGGTTTCTCAAGGTGGCTTGAAATTTCGTTTGGAGGTTTTTAGAACCAAGAATAAAGGTTGGGGTCTTAGATCATGGGATGCTATTCGTGCTGGAACTTTCATATGCGAGTATGCAGGGGAAGTTGTAGATAGTGCTAGAGTAGAGGAGCTTGGTGGTGACAATGAAGATGATTATATTTTTGATTCTACTCGCATTTATCAGCAGCTGGAAGTTTTTCCTGGTGATACGGAAGCTCCAAAAATCCCATCCCCCCTTATTATATCAGCAATAAATGAAGGGAATGTTGCTCGGTTTATGAATCACAGCTGCTCTCCAAATGTATTATGGCGTCCTGTCATTCGTGAAAATAAGAACGAGTCAGATCTCCACATTGCTTTTTTTGCAATTAGACATATCCCTCCTATGATGGAGTTAACTTATGATTATGGGACTGTTCTTCCTCTCAAAGTAGGTCAGAGGAAAAAGAAATGCTTATGCGGATCTATGAAATGCAGGGGTGTAGGCTTTTGTCTTTCTGGCATAGAAATAGAGTATCAGTTTAGGTAGTTCTGATTTCACATGGTTGGGTCACCAAGAAAGGAAAATCTGATTTATGGCATTGGTTCTTGTTTCTCAGTTCTAGCTAAGCTTAAGCCAGACAGCAGGATGGAACTTTGTAGAAAGATGTTAGCAGACAAACTTTTCTTTTTGGCAAACCTAGAGAATTGGCACATGGAAAGATCAATTTGTCTATTTACTAATGTGGGTAAGTTAAGTTGTAAAAGTTAACTGTAAGACACATTTTGTGTAGATTGTTTTTCTGCTGTTAGCTACCTTTTCTTTTTTCCTCATTTGGGATGGATTTTGAGTAGTTCACATGGTAAGGATGAATTTGACCTGTAGAATTGGATATTTGTTTTGTTGCCGTCATTTCCAAAAATCATCCCAACATTTATATTCTTTTGCATATGTTTGGTCTGTGGATCATCTAATCCTGCTAATAATTGTTAGTTTAAAA 2642 0.4122 MEHHFGQDTTPVSGSFDKTRVLNVKPLRTLVPVFPSPSNPASSSTPQGGAPFVCVSPSGPFPSGVAPFYPFFISPESQRLSEQNAQTPTAQHVPAAPISTAVPINSFRTPTGAANGDVGSSRKNSRSRGQVTEEDGFSNVEIDEIEAEEGTGTGRSKRKSQKKIKGRQSTCGSAEVDPDAVAADILKSLNPMVFDVLNQPEGSRDSVAYTLMVYEVMRRKLGQIEDSNRAANSGAKRPDLKAGALMMNKGIRTNSKKRIGTVPGVEIGDIFFFRFELCLVGLHAPSMAGIDYIGTKTSQEEEPLAVSIVSSGGYEDNVEDGDVLIYSGQGGVNRDKGASDQKLERGNLALEKSAHRGNEVRVIRGLKDPQHPTGKVYVYDGLYKIQNSWVEKAKSGFNVFKYKLVRLPGQPQAYMIWKSIQQWTEKSVSRAGVILPDLTSGAENVPVCLVNDIDNEKGPAYFTYIPTLKNLRPIGPLDSSTGCSCVGGCQAANFNCPCIQKNGGYLPYSAASLLADLKSVIYECGPSCQCPPNCRNRVSQGGLKFRLEVFRTKNKGWGLRSWDAIRAGTFICEYAGEVVDSARVEELGGDNEDDYIFDSTRIYQQLEVFPGDTEAPKIPSPLIISAINEGNVARFMNHSCSPNVLWRPVIRENKNESDLHIAFFAIRHIPPMMELTYDYGTVLPLKVGQRKKKCLCGSMKCRGVGFCLSGIEIEYQFR 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01479 718 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 109 718 IPR025794 GO:0016571
Pste5g01479 718 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 118 699 - -
Pste5g01479 718 MobiDBLite consensus disorder prediction 79 175 - -
Pste5g01479 718 Gene3D SET domain 428 705 IPR046341 -
Pste5g01479 718 MobiDBLite consensus disorder prediction 79 94 - -
Pste5g01479 718 SMART set_7 545 686 IPR001214 GO:0005515
Pste5g01479 718 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 243 425 - -
Pste5g01479 718 ProSiteProfiles YDG domain profile. 260 406 IPR003105 -
Pste5g01479 718 SMART G9a_1 255 410 IPR003105 -
Pste5g01479 718 SMART preset_2 435 529 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste5g01479 718 SUPERFAMILY PUA domain-like 242 425 IPR015947 -
Pste5g01479 718 SUPERFAMILY SET domain 421 686 IPR046341 -
Pste5g01479 718 Gene3D - 243 427 IPR036987 -
Pste5g01479 718 ProSiteProfiles Pre-SET domain profile. 481 542 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste5g01479 718 ProSiteProfiles Post-SET domain profile. 690 703 IPR003616 -
Pste5g01479 718 MobiDBLite consensus disorder prediction 102 134 - -
Pste5g01479 718 Pfam SET domain 556 680 IPR001214 GO:0005515
Pste5g01479 718 Pfam Pre-SET motif 439 537 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste5g01479 718 Pfam SAD/SRA domain 259 410 IPR003105 -
Pste5g01479 718 ProSiteProfiles SET domain profile. 545 680 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01479 Pste-Chr5 9461829 9465733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01479 6 703 Su(var)3-9 homologs AT1G73100 47.844 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pste5g01479 SAD_SRA 2e-50 CL0178