Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01477 ATGTTGGCGACCGCGATAGGCGCCTCAAATATTTTGATTTTTAATGCAACATTAACATTAACATCAAATCAAAAGGCTGTGGCTGCTGCTCCTACCGTTGGTTCCCATATTTGGGTGGAGGATCGTGATGTTGCTTGGATAGATGGTGAGGTCTTGGAGGCTAAAGGAGAAGATATTAAAGTCCTTTGCACTTCAGGGAAGATGCGGTCTTACTTTGAGTGCTTTGATTTCTTAAATATGAATGACTTGTGGGAATCTTTGAAGCTAAGCATGATGATGATTAGTTTTAATGATAGCTTGAATCTGTTTTTTCCTGTCTTGCAAGACCTCTACTTTTATTTGGTCATTGTTAAAGCATCCAATATTTATCATAAAGATACTGAAGTCCCACCGAGTGGAGTGGATGATATGACAAAGCTCGCATACTTGCATGAACCTGGAACTTACACTGGGAATATATTGATTGCTGTGAACCCTTTCATAAAGCTTCCTCATTTATATGATAGCCATATGATGGCCCAATATAAAGGAGCAGCTTTTGGTGAGCTAAGTCCACATCCCTTTGCTGTTGCAGATGCAGCATATAGGCTTATGATAAAAGAGGGAATCAGTCAGTCAATATTGTCCAATCCTGTTCTAGAAGCCTTTGGCAATGCAAAAACTGTTCGTAACAATAATTCAAGTCGTTTTGGCAAGTTTGTGGAGATTCAATTTGACCAAAGGGGAAGAATTTCAGGGGCTGCTATCAGGACTTATCTTCTTGAAAGATCACGTGTTTGCCAGGTGTCAGATCTGGAGAGGAACTATCATTGTTTCTACATGCTCTGTGCAGCACCTCCGGAGGATGTTAAAAAGTACAAACTAGGAAATCCAAGAATGTTTCATTATCTGAATCAATCAAATTGCTTTGAGTTGGAAGGGCTTAATGAATCTAAAGAATATAGGGATACAAGGAGAGCGATGGATATTGTTGGAATAAGTCCTGAGGAGCAGGATGCAATATTTAAAGTTGTTGCTGCAATTTTGCATCTTGGCAACATTGAATTTGCAAAAGGAAAGGAGATAGACTCATCTGTGCCCAAAGATGAAAAATCTCGGTTTCATCTACAGACAGCTGCTGAGCTTTTCATGTTGGTTGATAAGATTAATAATTCTATTGGTCAAGATCCTGAGTCAAAATCGTTAATTGGTGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTAATGATCCTGGTTTTCATGTTTTCAAAATGGAGCAAGAAGAATACAAAAAAGAGGAAATTGATTGGAGTTACATTGAGTTTGTGGACAATCAAGATATTTTGGATCTCATTGAAAAGAAACCTGGTGGCATTATTGCTCTTCTGGATGAAGCTTGTATGTTTCCTAGGTCAACACATGAAACTTTTGCTCAAAAGCTGTATCAGACCTTCAAAAACCATAAAAGGTTTAACAAGCCTAAATTGTCTCGTAGTGACTTCACAATTTGCCATTATGCTGGAGATGTCACTTATCAAACTGAATTCTTCCTCGACAAGAACAAAGATTATGTTGTTGCAGAGCACCAGGCACTTCTTTATGCCTCCACATGCCCCTTTGTATCAAGCCTGTTTCCCCCTTCACCAGAGGAATCTTCCAAGCAATCAAAGTTCTCTTCAATAGGTTCACGATTTAAGCAACAATTGCAAGCTTTACTTGAAACTCTCAGTTCCACTGAGCCACATTACATTCGTTGTGTAAAACCCAATAATCTCCTTAAGCCTGCAATTTTTGAGAATAAAAATGTTTTGCTGCAACTACGTTGTGGGGGAGTTATGGAAGCAATTAGGATAAGTTGTGCTGGGTATCCTACTAGAAAAACCTTTGATGATTTTGTGGATCGATTTGGCCTTCTTGCTCCTGAAGCATTGGACGGGAGTTCTGACGAGGTTACTGCTTGCAAGAGGATTCTAAAGAACGTTGGACTTGACGGTTATCAGATTGGTAAGACAAAGGTGTTTCTTCGAGCTGGTCAAATGGCAGAACTAGATACCCGTAGAAGTGAAATCTTAGGAAAGTCAGCAAGCATTATCCAGAGAAAAATTCGTTCCTATTTGGCCCGCCAAAGTTTCATCTTGCTTCGTTTGTCTGCTGTGCAGATTCAAGCTACTTGCAGAGGGCAACTTGCTCGGCAAGTTTACGAGGGAATGCGGCAGGAGGCTTGTAGTTTGGTTATTCAGAGGTGCTTCCGCATGCATATTGCTAGGAAGGCATACACAGATTTGTGTACCTCTGCTATCTCTATCCAGACTGGTATGCGGGGAATGGCTGCTCATTGTGAACTACACTTTAGAAGGAGGACTAAAGCAGCAACTATCATTCAGAGCCGCTGCCGGCAGTACTTGGCACAACTTCATTTCACAAAATTAAAGAAGGCAGCAATTGCAACACAGTGTGCATGGAGAGGGAAAGTTGCCCGGCGAGAATTGCAAAAACTCAAGATGGCTGCAAGAGAAACAGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGCAAAGCAAGTTGAAGACCTCACATTAAGATTGCAGCTGGAAAAACGTTTGAGGGTTGACATGGAAGAAGCAAAAGCACAGGAAAATCAAAGATTACAATCTGCTTTGCAAGAAATGCAACTTCAGTTTAAAGAAACTAAGTTACTTCTTGAAAAGGAGAAGGAAACTACAAAAAGAGCAGCAGAGAGAGCACCTGTCATACAACAGGTTCCAGTTGCTGACCATGCTTTGTTGGAGAAGCTCAGTAGTGAGAATGAGAAACTTAAGAGCATGGTAAGTTCACTGGAAAAGAAAATTGATGAAACGGAAAAAAGGTATGAAGAGGCAAACAGAATTGGCGAAGAAAGGTTGAAGCAAGCTTTGGATGCAGAATCAAAAGTAATCCAGTTGAAGACTGCTATGCAAAGGCTTGAAGAGAAATTCATAGACATGGAATCTGCAAATCACATTCTTCAGAAACAATCTCGACTAAACTCATCTGTGAAAACAATAGCAGAACACCTGTCTTCCCCAGTGGATGAGAAGTTAGAAAATGGTCACCATGTGGTGGAAGAGCAGAAAGCAGTTGATACATGTGTCACACCTGTGAAACAATTTGGTACAGAATCTGATGCCAAATTGAGGAGATCTTACATTGAACGACAACTTGAGAATGTTGATTCACTTGTTAACTGTGTTATGAAAAATATTGGCTTCAATCATGGAAAACCAATTGCTGCTTTCACCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAAGCTGAAAGAACTAGTGTATTTGATCGCCTTATCCAAATGATTGGTTCTGAAATTGAGAATCAAGAAGGCAATGATCATATGGCCTATTGGCTGTCAAATACATCTGCGTTATTGTTTTTACTTGAACAAAGCCTGAAATCTGGGAGTTCAACAAATGCTACCCCAGTAAGGAAACCACCCAATCCAACATCCCTCTTTGGAAGAATGACTATGAGTTTTCTTTCATCCCCTTCTTCTGCCAACCTCGCTGCCCCTCCATCGGATGTTGTACGCAAAGTAGAGGCTAAATACCCTGCTTTGCTTTTCAAGCAGCAGCTCACAGCGTATATGGAGAAAATATATGGCATCATTCGGGATAATTTGAAGAAGGATTTAACACCAGTTCTTGCATTATGCATTCTGGCACCAAGAACATCTAAAGGAGGGTTTCGTTCTGGCCGATCCTCTGCTAAAGATTCCCCAATGGTTCACTGGCAGAGTATTATTGAATCACTCAATACTCTCCTCTGTACACTAAAAGAGAACTTCGTGCCTCAAGTTCTTATCCAAAAGATCTTCAGTCAAACATTCTCACATATTAATGTGCAACTCTTCAATAGTCTTCTTCTTCGTCGTGATTGTTGCACATTCAGTAATGGGGAGTATGTGAAAGCAGGATTAGCTGAATTAGAGTTGTGGTGCTGCCAAGCAAAGGAAGAGTATGCAGGGTCATCTTGGGATGAGCTTAAGCACATAAGACAGGCTGTTGGATTCTTGGTTATTCATCAGAAATATAGGATTTCCTATGATGAAATCATCAATGATTTATGCCCTATCTTGAGTGTCCATCAGCTGTATAGAATATGTACACTTTACTGGGATGCGAACTATAATACACGAAGTGTATCTCCTGATGTCCTTTCAAGCATGAGGATGCTAATGGCAGAGGACTCTAATAATGCTCAGAGTGATTCTTTCTTGTTGGATGACAGTTCCAGCATCCCCTTCTCAGTGGATGATCTCTCTACATCACTGCAAGAGAAGGACTTCTCAGATATGAAAGCAGCAGATGAGCTTCTTGAAAATCCAGCCTTCCAGTTTTTGAATGAGTAGGCTCAGGAAGCTTTGTATGCTTCTATAATTGTCTTTTCAAGTTGGTCCTTGCCATTGTTGGTTGTAAATGCCATTGATTCATGTTGCTATATATCCCTGCATTACATGCCCCTGCTGTAAAGTTATTTTTTCATTCTTTTCATAGCATTCAATTGTAAAATATTCATTAATAGGAGCAGGGATAACTTTTAGGATTAGTGAGCTTGCCTTGTATTTTCCTTTTTGTCTCTTTCTTTTGTCCTAGTCAATTTAAATGCTTCTTATTCTCTATTTTGGGGGCCAAGCTCACTACCCAAATTTTGACTTTGTAAAGTCACAAGAAGGAACATTTATGTAGTAATCAACATCTGAACTCTAGTTGTATGATTATTATTGAGTGTCTTGTATAAACAATGTCATGTAACCCATTTATTTACTTGGGGAACTTCTTTCCGTGTGTTATAACTTTGGTAGATTATTAAATGAAACGGG 4863 0.3977 MLATAIGASNILIFNATLTLTSNQKAVAAAPTVGSHIWVEDRDVAWIDGEVLEAKGEDIKVLCTSGKMRSYFECFDFLNMNDLWESLKLSMMMISFNDSLNLFFPVLQDLYFYLVIVKASNIYHKDTEVPPSGVDDMTKLAYLHEPGTYTGNILIAVNPFIKLPHLYDSHMMAQYKGAAFGELSPHPFAVADAAYRLMIKEGISQSILSNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQVSDLERNYHCFYMLCAAPPEDVKKYKLGNPRMFHYLNQSNCFELEGLNESKEYRDTRRAMDIVGISPEEQDAIFKVVAAILHLGNIEFAKGKEIDSSVPKDEKSRFHLQTAAELFMLVDKINNSIGQDPESKSLIGVLDIYGFESFKTNSNDPGFHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFNKPKLSRSDFTICHYAGDVTYQTEFFLDKNKDYVVAEHQALLYASTCPFVSSLFPPSPEESSKQSKFSSIGSRFKQQLQALLETLSSTEPHYIRCVKPNNLLKPAIFENKNVLLQLRCGGVMEAIRISCAGYPTRKTFDDFVDRFGLLAPEALDGSSDEVTACKRILKNVGLDGYQIGKTKVFLRAGQMAELDTRRSEILGKSASIIQRKIRSYLARQSFILLRLSAVQIQATCRGQLARQVYEGMRQEACSLVIQRCFRMHIARKAYTDLCTSAISIQTGMRGMAAHCELHFRRRTKAATIIQSRCRQYLAQLHFTKLKKAAIATQCAWRGKVARRELQKLKMAARETGALQAAKNKLAKQVEDLTLRLQLEKRLRVDMEEAKAQENQRLQSALQEMQLQFKETKLLLEKEKETTKRAAERAPVIQQVPVADHALLEKLSSENEKLKSMVSSLEKKIDETEKRYEEANRIGEERLKQALDAESKVIQLKTAMQRLEEKFIDMESANHILQKQSRLNSSVKTIAEHLSSPVDEKLENGHHVVEEQKAVDTCVTPVKQFGTESDAKLRRSYIERQLENVDSLVNCVMKNIGFNHGKPIAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSEIENQEGNDHMAYWLSNTSALLFLLEQSLKSGSSTNATPVRKPPNPTSLFGRMTMSFLSSPSSANLAAPPSDVVRKVEAKYPALLFKQQLTAYMEKIYGIIRDNLKKDLTPVLALCILAPRTSKGGFRSGRSSAKDSPMVHWQSIIESLNTLLCTLKENFVPQVLIQKIFSQTFSHINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPILSVHQLYRICTLYWDANYNTRSVSPDVLSSMRMLMAEDSNNAQSDSFLLDDSSSIPFSVDDLSTSLQEKDFSDMKAADELLENPAFQFLNE 1463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01477 1463 Gene3D - 619 685 - -
Pste5g01477 1463 Gene3D Kinesin motor domain 209 365 IPR036961 -
Pste5g01477 1463 SMART iq_5 686 708 IPR000048 GO:0005515
Pste5g01477 1463 SMART iq_5 734 756 IPR000048 GO:0005515
Pste5g01477 1463 SMART iq_5 805 827 IPR000048 GO:0005515
Pste5g01477 1463 SMART iq_5 709 731 IPR000048 GO:0005515
Pste5g01477 1463 SMART iq_5 782 804 IPR000048 GO:0005515
Pste5g01477 1463 Coils Coil 966 1000 - -
Pste5g01477 1463 Gene3D Kinesin motor domain 544 618 IPR036961 -
Pste5g01477 1463 CDD MyosinXI_CBD 1059 1432 IPR037975 GO:0007015
Pste5g01477 1463 Pfam DIL domain 1285 1388 IPR002710 -
Pste5g01477 1463 ProSiteProfiles IQ motif profile. 710 739 IPR000048 GO:0005515
Pste5g01477 1463 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Pste5g01477 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 738 835 IPR027417 -
Pste5g01477 1463 Gene3D Kinesin motor domain 36 208 IPR036961 -
Pste5g01477 1463 SMART MYSc_2a 126 685 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste5g01477 1463 Gene3D - 785 834 - -
Pste5g01477 1463 Gene3D - 687 736 - -
Pste5g01477 1463 Gene3D - 737 784 - -
Pste5g01477 1463 Coils Coil 924 958 - -
Pste5g01477 1463 FunFam unconventional myosin-Va 785 833 - -
Pste5g01477 1463 FunFam Myosin XI D 687 736 - -
Pste5g01477 1463 ProSiteProfiles Myosin motor domain profile. 148 684 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste5g01477 1463 Pfam Myosin N-terminal SH3-like domain 33 69 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pste5g01477 1463 Gene3D - 405 543 - -
Pste5g01477 1463 ProSiteProfiles Dilute domain profile. 1108 1409 IPR002710 -
Pste5g01477 1463 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Pste5g01477 1463 Coils Coil 843 902 - -
Pste5g01477 1463 SMART DIL_2 1284 1391 IPR002710 -
Pste5g01477 1463 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 32 81 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pste5g01477 1463 Pfam IQ calmodulin-binding motif 808 826 IPR000048 GO:0005515
Pste5g01477 1463 Pfam IQ calmodulin-binding motif 713 730 IPR000048 GO:0005515
Pste5g01477 1463 Pfam IQ calmodulin-binding motif 784 803 IPR000048 GO:0005515
Pste5g01477 1463 Pfam IQ calmodulin-binding motif 689 707 IPR000048 GO:0005515
Pste5g01477 1463 Pfam IQ calmodulin-binding motif 738 755 IPR000048 GO:0005515
Pste5g01477 1463 Pfam Myosin head (motor domain) 209 375 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste5g01477 1463 Pfam Myosin head (motor domain) 377 672 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste5g01477 1463 Pfam Myosin head (motor domain) 148 208 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste5g01477 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 737 IPR027417 -
Pste5g01477 1463 PANTHER MYOSIN 128 208 - -
Pste5g01477 1463 ProSiteProfiles IQ motif profile. 735 764 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01477 Pste-Chr5 9451887 9483729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01477 31 1462 Myosins gene family AT5G43900 65.209 0.0 2010