Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01468 TCACAACTCAAACAGGAGAGAGAAAGTTTAAAAAAAAAACAACCTTTTTTTAGAGAGAGAAAGTGAGGGTAGCCCTAGAAAAATATGCAATCAGATAAGGACTTTTGCAGCTGAGAGACACTGCAATATAGAGAGAGAAACTATTATTTTTTCCCCCAATTTTCATGTTTTCTTTTACCCTCTTTTTCCATTGTTGTAGAGTAATTTGCTTCTTTGCACTGACACAGTGACAGTGGTTCTCCCACCTCTTTCTCTGTGTAACTCTGCCATCACTCGTCATTTCCCCAAGAGAAAAAAAAAAAACTGTTGAACCTTTTTAAACTGAATCAATCACTAGCTTCCATTTCTTCACAACTGTGAATGTGCACCACAGCTTTTTGATCCTGTTCCTCAGATGTTAGTATGATTCCTTTTCCATTTTCTTTGTGTATGCACGTTGAAACCCATGTTGCATTCTCTCTTGTTTGTTTGGGGAGTTGAATCTATTTTATTTATGAGCCCAATTCTCCGAAGTTTGTAATTTTCCTTGGAAAAAAATAATTGTGGCTGATGTTTTGGTTGTTTTTTTCGTGATTCTGCTGCCCCTTTGGTATGATATGGCATTTCGTGCCCTTTTTTGGAACTGGGTTTAAAAGCTTTTTACGGCATTGGCCTAGAGTAATTCCTTCATTTGTTTTTGTTTCACTTGTACTTTTTGTGGTGGTTATTTTCTGGGTGTTATCACTTGAATTGCTTGTTGTTTAAGATTTATGATGGGTGTTGGTAAAAGTCGACCTTTTTTCATGTATCTTCAATATGAAGCCTTTTTTTTTGTTGTTTCTTATAGTTTGGTAAGCTGTACATAGCATTTTTTTATTTTTTGTCTTCTCTTAGACATGTGCAAATTGTGGTTAAAGAGTAGTTCTCTTGTTTGTGTTGACATCTTCTCGGATTCCATCATTTCCTATGATCTATCTTCTACTTTCTCCTTTGTCAAGTACAAGTGTGTATTCATGTGTATTTTATAGTATGATGCCAACAATGAAAAAATTTATCTGCTGGAAGCTTCACTATTTTGATTTTAAGGACTTGTATTTGTGTTCCTCAAGCTACAGTTACTTACAGCTTATGTAATTTAAACACTTTTTTGACTCTCTTGTTGGTTGTTGCTGATTGGATTTCGTACTTTTTATGGTATTCTGATGTGTTGGTGTTTTTTTCCTTCACAATTTGTCACTATACTCTATTTGGGAACAGAGCTAGGTGATAAGTTTTGAAGTACTGAATATTGAGTCTCAGTTTCTTGTGAAAGATTGTGAAGGCAATTGAAGTAAATGCATGGATCGTGGGGACCAAATGGCGTTATCCGGGTCTTACTATATGCAGCAAAGAGGAATACCTGGATCTGGAGCACAATCTGAGTTGCATAATATTCGACCACTGTCTAATCCAAATCTACCATTTCAATCCAGCATTGGTGGTGGTACCATTGGATCCACATTACCATTGGAATCTTCGGCAATTTCGGCTCATGGAGTTAATGTTGGAGCTCCTCCTGGGGCACCTCCAGGGGAACCTGTGAAGAGGAAGAGAGGAAGGCCTAGGAAATATGGAACTGATGGAACTGTGTCATTGGCATTGAGTCCAACTCCAACATCATCTAGCCATCTTGGAGCCTTGTCTCCAAGCCAGAAACGGGGCAGAGGACGCCCACCTGGGACTGGGAAGAAACAGCAATTGGCTTCTCTTGGTGAATTGATGTCTGGTTCTGCTGGGATGGGATTCACTCCTCATGTCATCAACATTGCAAGTGGAGAAGACATTGCAACAAAAATCATGGCATTTTCTCAGCAGGGACCCAGAGCTGTGTGCATTTTGTCAGCCAACGGTGCTGTTTCAACTGTCACACTTCGTCAGCCATCAACTTCAGGCGGCACTGTCACATATGAGGGGCGCTTCGAGATAGTGTGCCTGTCAGGCTCTTACTTGGTCACCGATAATGGTGGCTCACGCAATCGAACTGGTGGGCTGAGTGTGTCCCTTGCTAGTCCTGATGGTAGAGTCATTGGTGGTGGAGTTGGTGGAGTTCTCATTGCATCAAGTCCTGTTCAGGTGGTGGTTGGGAGCTTTGTATGGGGTGGAGCAAAGACAAAGAACAAGAAAAAGGAAGGGTCAGAAGGTGGAGAAGTTGCTGTGGAGTCAGATCATCAGGCAGTTCACAATCCAGTGGCACTGAATAGCATCTCACCAAATCAAAACCTTACTCCAACCCCTCCATCTTTAAGTCCTTGGTCAGCATCACGACCGTTGGATATGCGTAATTCCCATGTCGACATTGATTTAATGCGTGGGTGACAATATATTGAATATACACTAGTGCTGTGTGTATATATTTCAGTTTCATGGTCACTCATCTAATTTTGTTGTAGTAGTAATGACAGAATGGGAAGTACCAACAAACTGCAGAGTAGAGCCAGCTGACTTTTGCAATTGATAAATCTCACGTATCCATCCACCCATGATTATTCACTTGGGGTTGTACTCATATTTTTGTAGCTGTGAGGAATTTTAATTTGAAGATTGTATGTTCCTGATTGGTAATGATACAATTTATGTCCTATTTAGAAAAATAATTGACATTGGGCAAGATGTTTTATGTGGTTTAGGAGCATCAGATATGACAGAATATCATGTGATTTTTGTCATTCTAGAAGGCAATGACAAGGGGAACATGAAGATTTATTGCTGTGAATGCATGATGTGAAAGCGTTTTGTATCCTAATGTTGTGAGCAGTGTGGTGTGGGGTCCTAGGTTCTCTTCTAGCTTTTAGCTGCTCACATGCATTGTACACTCCCCTTTTCCAACCATCCATTAAATTTAGTGCTAATAAAAGGGCACCAGGCTAGAAAGAAGAAAAATAAAAAGGTATTGTAAACTATTAGTTGGTTTTGTTAACCAAACCATTTCAACTCAATACCTTTTCCTTTTTTCTTTTCTCCTTATAACTCTAATTTGTAAACATGGTTACATTTCTGAAAAG 3020 0.395 MDRGDQMALSGSYYMQQRGIPGSGAQSELHNIRPLSNPNLPFQSSIGGGTIGSTLPLESSAISAHGVNVGAPPGAPPGEPVKRKRGRPRKYGTDGTVSLALSPTPTSSSHLGALSPSQKRGRGRPPGTGKKQQLASLGELMSGSAGMGFTPHVINIASGEDIATKIMAFSQQGPRAVCILSANGAVSTVTLRQPSTSGGTVTYEGRFEIVCLSGSYLVTDNGGSRNRTGGLSVSLASPDGRVIGGGVGGVLIASSPVQVVVGSFVWGGAKTKNKKKEGSEGGEVAVESDHQAVHNPVALNSISPNQNLTPTPPSLSPWSASRPLDMRNSHVDIDLMRG 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01468 338 ProSiteProfiles PPC domain profile profile. 145 285 IPR005175 -
Pste5g01468 338 MobiDBLite consensus disorder prediction 10 44 - -
Pste5g01468 338 Pfam Plants and Prokaryotes Conserved (PCC) domain 151 265 IPR005175 -
Pste5g01468 338 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 65 304 IPR039605 GO:0003680
Pste5g01468 338 MobiDBLite consensus disorder prediction 301 323 - -
Pste5g01468 338 MobiDBLite consensus disorder prediction 97 115 - -
Pste5g01468 338 MobiDBLite consensus disorder prediction 1 44 - -
Pste5g01468 338 CDD DUF296 150 264 IPR005175 -
Pste5g01468 338 MobiDBLite consensus disorder prediction 301 315 - -
Pste5g01468 338 MobiDBLite consensus disorder prediction 65 134 - -
Pste5g01468 338 FunFam AT-hook motif nuclear-localized protein 1-like 151 281 - -
Pste5g01468 338 SMART AT_hook_2 119 131 IPR017956 GO:0003677
Pste5g01468 338 SMART AT_hook_2 82 94 IPR017956 GO:0003677
Pste5g01468 338 Gene3D - 151 291 - -
Pste5g01468 338 SUPERFAMILY AF0104/ALDC/Ptd012-like 149 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01468 Pste-Chr5 9405587 9412419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01468 1 338 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 49.185 2.49e-86 262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01468 5 9405587 9412419 Pste5g01468 5 9405587 9412419 ECH
Pste5g01468 5 9405587 9412419 Pste6g02125 6 10040467 10047150 PCT