Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01466 CACCTTTTGTGATAGGAGCATGACCACCCTGTTTTTATTGGACAAGACAAGACTGAAGAGACACGGGCATGTAGCGGCAGCACGAAGATACCAACTCCGTTCCGTCGAAGAAGATGGGACGAGCCAAGCTGTTGGTTTCAGATTTTGTTCTGTCTTTCATGTGGGTATGGTCCTCTGTTCTTGTTCGGATCATTGTCTTCCACCACCTTGGTTTCTCTCACTCACCTCTCGGGGAGGTTATCAAGACCGCCTTCTCCGTCGTCAACATGTTCCTCTTCGCGTTTCTTGTCAAGCTTACACGTGGCGCCGCCTACAACCCTCTCACCGTCTTCGCCGATGCTATCACCGGGGATTTTAACAACTTCCTCTACTGCGTTGCTGCCAGAATTCCCTCCCAGGTGGCTGGGTCGATTGTTGGAGTTAAATTTCTTATTGATACCATTCCTGAAGTCGGACTAGGACCACGTCTGAATGTGGATATTCATCAAGGTGCACTGACAGAAGGATTACTAACCTTTGCAATTGTAACCATTTCACTTGGACTTGGCACAAAAATTCGTGAAAACTTCTTCATGAAGACTTGGATTTCCAGCCTCTCCAAGCTAACACTTCATATACTTGGCTCTGATCTGACTGGTGGTTGCATGAACCCTGCATCTGTAATGGGATGGGCTTATGCTCGTGGGGATCACATAACAAAGGAGCACTTCTTTGTATACTGGCTTGCTCCCATAGAAGCAACTATTTTTGCAGTGTGGATATTCAAATTTCTGGTGCAGCCTGCAAAAACAAAGAGTAAATCGGATTGAAGGAACTTCATTTTGTGCTAAATGTATTATTCCATCTTGCTTTCAGTTGTTATTTGTACAGTTGGTGGGATTAATTTATGGCAAGTCAAGAACTTTGTACAGGTGACTTAGTTTGTTTTGGTAATGTGTTATCTACTAGTTTAGCATGATTTTC 963 0.4434 MGRAKLLVSDFVLSFMWVWSSVLVRIIVFHHLGFSHSPLGEVIKTAFSVVNMFLFAFLVKLTRGAAYNPLTVFADAITGDFNNFLYCVAARIPSQVAGSIVGVKFLIDTIPEVGLGPRLNVDIHQGALTEGLLTFAIVTISLGLGTKIRENFFMKTWISSLSKLTLHILGSDLTGGCMNPASVMGWAYARGDHITKEHFFVYWLAPIEATIFAVWIFKFLVQPAKTKSKSD 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01466 231 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g01466 231 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g01466 231 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g01466 231 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g01466 231 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g01466 231 Pfam Major intrinsic protein 6 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g01466 231 PANTHER AQUAPORIN SIP2-1-RELATED 1 229 IPR044226 GO:0015267
Pste5g01466 231 Gene3D Glycerol uptake facilitator protein. 3 231 IPR023271 -
Pste5g01466 231 SUPERFAMILY Aquaporin-like 5 224 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01466 Pste-Chr5 9392104 9394763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01466 1 231 Major Intrinsic Protein MIP AT3G56950 59.072 1.25e-100 291