Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01444 CACTCACTTAAGTTGGCACGCATGGCTTGTTCGTGCCAAATTTCTAAGCATGCTCGTCTCTGCGCACACGCACGACACGAGCGAGAACCCAACCTCGTGAGACGCATCTCGCATGCTTCACTTGCTCGCACGCTTGCCGGCCGAACCTCTCTCCTTCTCCGCCTCCAGACACTTTCCGGTGCTGCACTTCCCTCTCCTTATCTTGATCCTGCCGGATTCCTTCCCTTTTCCGTTGATCTCGCCGGACCTCCGCTTCGGTGGCCGGAATTGCAGTGCCAGACGGAGTTCTAAAGATTCCGGCAAGGAGAAGATGGATCTGCCGCAAAATTTGTTAGTCTCATCGAGATTTCGATCTGAAAGAGTTGGGATCATGGCAACTGAAATGCAAAGGCTTGTTGGAACGAGTGAGGATGATGAAGAAATGGGAATGGATGTGAAAGATGAGGATGATGAAGATGATGATTACGAGGAAAATGGAGGCGAGCCCGGCAATGCTTCAGGGATGGTAGAGATTGATGGTGGGAATGGGATAGGAACTGCCACTGGTGACAACAGGTTTCAGCAGCACCAGCAGTTTCCAGAGCAAGTAGGCACACCGGGTGGAGGGGCTGACATAAATGATGTCATTGCTGCTCTAGCAAGGGAAGCTGGATGGGTGGTTCTTCCAGATGGTACTACTTTTCCTCAAGATCTCAGGCATCATAAGTGGTTTCCCATGAGTGTGAGGACTATGGGTCAAAAGCCACCTGGTGGTAATTCTACAATGGTCACATCATCATCTTCCCAAGTGGCTTCACAACAGACTCAATCTGCTTCTCTCAGGGGAGTTGCTTCTGGCTATAAGACCCCTTTGGAGTATAATGCATGCCAAACAAAAGGTGTTTTTATGCCAACTCCATCGCCTTACAATCTATCCACAAGTTCCCGGTCTCAAACATCTATGGTGGGGGATGGAGAAGCTCAAAGAGACAATCATCCTTTGGTTGGTGGTTCAATGGATAATGTTGATGAGAAGCAGATTGCTGAATTGCCCCCAAGATTACCAGAGCGTGATTTGGCTGGTACCCCATACGTTCCAGTTTATGTGATGCTACCATTGGGTGTGATCAATATTAAATGTGAGCTTGTTGATCCGGATGGTCTACTAAAGCAGTTGAGGGTGTTGAAATCAGTACATGTTGATGGGGTTATGGTAGACTGTTGGTGGGGAATAGTGGAGGCACATGCTCCACAAGAGTATAATTGGAATGGTTACAAGAGACTCTTTCAAATGGTGCGAGAGCTTAAGCTTAAGCTGCAGGTTGTGATGTCATTTCATGAATGTGGTGGCAATTTTGGTGATGATGTTTGTATTCCATTACCCCATTGGGTTGCTGAAATTGATAAGGAACGAGTTTTAAGAGGTCGTACTGCTGTGGAGGTTTACTTTGATTTCATGAGAAGTTTCCGGGTAGAGTTTGATGAGTATTTTGAGGATGGCTTAGTCTCTATGATTGAAATTGGATTGGGTCCTTGTGGAGAGCTAAGATACCCATCTTGTCCTGTTAAGCACGATTCTGCTTTCTGCTACAAATGCTTCCTTGGCTCAAATTGCTATGATCAGTATATGTTGAAAAGCCTTAGAAAAGCAGCAGAAGTAAGGGGTCATGCTATTTGGGCTAGAGGGCCAGATAATGCTGGTACCTATAATTCTCAGCCACATGAAACGGGTTTCTTTTGTGATGGGGGTGATTATGATGGCTTCTATGGCAGGTTTTTTCTTAGCTGGTACTCTCAGGTTTTAGTTGATCACGGAAACCGGGTACTTTCTCTGGCAAAATTAGCTTTTGAGGGATCTTGCGTTGCTGCAAAGTTATCAGGCATTTACTGGTGGTACAAGACTGCAAGTCATGCTGCTGAATTAACTGCTGGGTATTATAACCCATGCAATCGTGATGGTTATGCTGCAATTATGACAATGTTAAAGAGAAATGGAGTTAGCTTAAACATTCCTTGTGTTGACTTGCACACATTGAACCCACATGAGGGATTTCCAGAGACATTTGCAGATCCTGAGGGGTTAGTCTGGCAAGTGTTGAATGCTGGATGGGATGTTGACTTACCAGTTACAAGTCAGAATGGATTTCCTTGCCTGAACAGAGTTGGCTATAACAAGCTTTTGGATAATGCCAAGCCCATGAATGATCCAGATGGAAGGCATTTTTCATCCTTTACTTATCTAAGGCTTAGTCCACTTCTTATGGAACGACAAAACTTCGTGGAGTTTGAACGATTTGTCAAGAGAATGCATGGGGAAGCTGTTCTTGATCTTCAGGTATAACTGGTGTAAACAGTCTCGTTGAATTTGTATTTATAATTTCCCTGACAAAATGGTTGGGGGTATTCTGTTACAGAATAGGAGAAATAGGATTGCTGTTTGCAATGGCACATATTAGGTTAAGTAGTTTAACTAGGATAAACTTTTGTTCTTCACCCCTTTTGTGGGATCAAACGACTCACATGAAGCTCGGTTGTATAATTTATAGACACTTGTTCAACTCATTGACCTTCTGTTTTAGAGATCATGTACAGTGATCTGTAAAATTATGGAACTTGCAACTTTACATCA 2608 0.4433 MLHLLARLPAEPLSFSASRHFPVLHFPLLILILPDSFPFPLISPDLRFGGRNCSARRSSKDSGKEKMDLPQNLLVSSRFRSERVGIMATEMQRLVGTSEDDEEMGMDVKDEDDEDDDYEENGGEPGNASGMVEIDGGNGIGTATGDNRFQQHQQFPEQVGTPGGGADINDVIAALAREAGWVVLPDGTTFPQDLRHHKWFPMSVRTMGQKPPGGNSTMVTSSSSQVASQQTQSASLRGVASGYKTPLEYNACQTKGVFMPTPSPYNLSTSSRSQTSMVGDGEAQRDNHPLVGGSMDNVDEKQIAELPPRLPERDLAGTPYVPVYVMLPLGVINIKCELVDPDGLLKQLRVLKSVHVDGVMVDCWWGIVEAHAPQEYNWNGYKRLFQMVRELKLKLQVVMSFHECGGNFGDDVCIPLPHWVAEIDKERVLRGRTAVEVYFDFMRSFRVEFDEYFEDGLVSMIEIGLGPCGELRYPSCPVKHDSAFCYKCFLGSNCYDQYMLKSLRKAAEVRGHAIWARGPDNAGTYNSQPHETGFFCDGGDYDGFYGRFFLSWYSQVLVDHGNRVLSLAKLAFEGSCVAAKLSGIYWWYKTASHAAELTAGYYNPCNRDGYAAIMTMLKRNGVSLNIPCVDLHTLNPHEGFPETFADPEGLVWQVLNAGWDVDLPVTSQNGFPCLNRVGYNKLLDNAKPMNDPDGRHFSSFTYLRLSPLLMERQNFVEFERFVKRMHGEAVLDLQV 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01444 735 SUPERFAMILY (Trans)glycosidases 317 731 IPR017853 -
Pste5g01444 735 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 592 603 IPR001554 GO:0000272|GO:0016161
Pste5g01444 735 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 541 560 IPR001554 GO:0000272|GO:0016161
Pste5g01444 735 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 610 633 IPR001554 GO:0000272|GO:0016161
Pste5g01444 735 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 650 672 IPR001554 GO:0000272|GO:0016161
Pste5g01444 735 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 355 369 IPR001554 GO:0000272|GO:0016161
Pste5g01444 735 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 398 419 IPR001554 GO:0000272|GO:0016161
Pste5g01444 735 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 376 394 IPR001554 GO:0000272|GO:0016161
Pste5g01444 735 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 575 591 IPR001554 GO:0000272|GO:0016161
Pste5g01444 735 MobiDBLite consensus disorder prediction 266 281 - -
Pste5g01444 735 Gene3D Glycosidases 425 734 - -
Pste5g01444 735 MobiDBLite consensus disorder prediction 95 146 - -
Pste5g01444 735 MobiDBLite consensus disorder prediction 103 122 - -
Pste5g01444 735 Gene3D Glycosidases 314 424 - -
Pste5g01444 735 MobiDBLite consensus disorder prediction 266 295 - -
Pste5g01444 735 PRINTS Plant beta-amylase signature 716 730 IPR001371 GO:0000272|GO:0016161
Pste5g01444 735 PRINTS Plant beta-amylase signature 456 465 IPR001371 GO:0000272|GO:0016161
Pste5g01444 735 PRINTS Plant beta-amylase signature 701 715 IPR001371 GO:0000272|GO:0016161
Pste5g01444 735 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 423 728 IPR001554 GO:0000272|GO:0016161
Pste5g01444 735 Pfam BES1/BZR1 plant transcription factor, N-terminal 166 271 IPR008540 -
Pste5g01444 735 Pfam Glycosyl hydrolase family 14 324 721 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01444 Pste-Chr5 9233560 9240546 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01444 87 732 Glycoside Hydrolase AT2G45880 54.039 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Pste5g01444 Glyco_hydro_14 2.7e-77 CL0058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01444 5 9233560 9240546 Pste5g01444 5 9233560 9240546 ECH