Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01443 CCTAGTGCCAGAATTTGGAGAAAGAGTTCTCATTCAGGTGGGATTAAAAGAGTTACGTACGGAATTGGAAAACAAAAATTAGCGAATGGCACATGAAAAGATGAGGACGAAATTGACAGCACTAGTTGTGGATGACAATAAACTGAACAGAAAGATACATGAAAAGATGTTGGAGAGCTTTGGAGTGAAGAGTGAGGGAGTGGAAAATGGCAGAGAAGCTGTGGACATTCATTGCCGTGGACACAGATTTGACCTCATTCTCATGGACATGGATATGCCTGTCATGAATGGCATTGAGGCAACAAAAGAGCTTCGGTTAATGGGCATTGGTAGCATCATTGTTGGCGTCTCATCACGCTGTACGGAAGCAGAAATACGAAAATTCATGGATGCGGGTCTCAATGACTACCATGAGAAACCCTTCAACACTGCTAAGCTTTCTTCCATTCTTGATAACATCTGATCTAACCCTATTATTCATAACTCAAATTCCATGCCTCTTTTTTCTTCTTATGTACTTCTGCTCAATCACGTAACTCTCAGTGTTACAAAATAATACAAATAAATAAATTACCTG 577 0.4003 MAHEKMRTKLTALVVDDNKLNRKIHEKMLESFGVKSEGVENGREAVDIHCRGHRFDLILMDMDMPVMNGIEATKELRLMGIGSIIVGVSSRCTEAEIRKFMDAGLNDYHEKPFNTAKLSSILDNI 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01443 125 CDD REC_hyHK_CKI1_RcsC-like 13 122 - -
Pste5g01443 125 Gene3D - 1 125 - -
Pste5g01443 125 Pfam Response regulator receiver domain 13 122 IPR001789 GO:0000160
Pste5g01443 125 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 124 - -
Pste5g01443 125 ProSiteProfiles Response regulatory domain profile. 11 125 IPR001789 GO:0000160
Pste5g01443 125 SUPERFAMILY CheY-like 9 124 IPR011006 -
Pste5g01443 125 SMART REC_2 10 122 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01443 Pste-Chr5 9231824 9232936 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01443 10 125 Response Regulator Gene Family AT3G04280 44.915 4.02e-28 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste5g01443 Response_reg 1.3e-22 CL0304