Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01442 GAAAAATTGAAAGTTGCAAGATTGAGAATGGATCCTGGTGCAGCAAGTAGGTGAAGGACTGAAAGTGTAGTATCCTCAGATTTTGTTTTAAGTTAGCAAGTCAGAATAGTCTATTCCTTCAACAGTTCCCATAATTTCTTTATTCATTTCTAAATTCTTCTTTTTTCCTTTGAAGGGAAACCTTAATCATTCTTTTGCTTCAGGTAAGCAATGTTCCCTCAGAGAATGTTCAACCCTTCTGTTTCTCACACCAAAAACTCTTCTTTCTACACGGAGATTCCTGCACGATCAATTTTGGGTTTTTGCTCTTGGACTCATTACACACTGGTCATAACACAAATCATCACATGCATATTTAGTTCATAGCTTTTTCTCTGAACTATTATCAAGTGTGGGTCTCTGCTGCTTCTGTTCTGCACCATCTTTTTCTTCAATTGCTATATTTCTCTTTGATATCTGATCTGGGCTAACTTCTTTTTCTTCTCAGACCAGTTTTCACCCACCCCATTTTACACTTATTGCTTTGTGTTTGTGACTTGTTCTCACTAAATATCTGGATTCAAGAGATATTCCTTTTGCATAGACCCATATTTGGTGCCAAGTTTGTTCATTTTGGATGTAGCAAAGAATCATTGCATAGACACTTTACTTTTGGTTTTCAGGTCACTTTATTGCAGTTGAGGTGTGGGGGTATTGGCATTTATTTGTATTTGGGAAATGAACAGATAGAGTAGTAGGGTGGTTCTGGGGTTCAGATAATGGGATCTCAAGGTGGGGCAGTCCAAGAGCCAAAGACTGGGTCTTTGACTAGGGAAGGGTCTTTATACAATCTCACCCTTGATGAGGTGCACAACCAGCTTGGAAATTTGGGGAAACCCTTAGGAAGCATGAATCTTGATGAGCTGCTCAAGAGTGTGTGGACTGCTGAATCTGGAACTGATGCTTACATGCAGCATGGTCAGGAAGCTTCTGCTGGGTCATCTCTTAATCCACAAGGGAGCTTAACATTGTGTGGAGATCTTAGCAAGAAAACTATTGATGAGGTTTGGAGAGATATGCAACAGAAGAAGAGTGCTTGTAAGGAAACACAGCCTACACTGGGTGAGATGACCCTGGAGGATTTCTTGGTGAAGGCTGGGGTGGCTACTGAACATTTTTCTACTGAGGATAGTACCATGGCTATGTCAGGAGTTGATTCTCAGCACAACACATCACAGCATGCCCATTGGATGCAATACCAGCTCACTTCTGTGCAGCAGCAGCCACAGCAACCACAGCATCGGCATCCAAATCAGCAGAATAATGTGATGCCCAGTTTTTCTGGTTTTATGGCTGGCCATGTGGTTCCGCAGCCTATACCGGTTGTGGTGAATCCGGTTCTGGATGCAGGATACTCTGAAACAATGCCATCTTCTTTGATGGGTGCCTTATCCGATTCACAAAGTGCAGGTAAGAAAAGGATTGCCTCAGGTGACGTGGTTGAGAAAACTGTTGAGAGGAGGCAGAAGAGGATGATAAAAAATAGGGAATCTGCAGCTCGGTCCCGGGCTAGAAAACAGGCTTACACACAAGAACTGGAGATTAAAGTTTCGCGTTTAGAAGAAGAGAATGAAAGGCTTAGAAGACAGAACGAGATAGAGAGGGTGTTGCCAAGTGCACCACCACCTGACCCCAAGCATCAGCTTCGCCGAACTAGTTCTTCTCCCCTGTGATGACTTCATTGCAAATGAGCCTACCAAACTTTTCATGCACTCTTATAGTTCTATTTGCAACATATATGTTTGGCACAGTTTCCAAATTTGGAAGGCTATTTTTCTATGGGAAGTGCTGCTATTTATTCTCACTCAGCATATTCCCTTGTAAGAGTGTATTTCCTAAATGTACATTGTATAAGCCCCACTTCCAAGTTACCCTGCACCTTAAATATGCTTAGTCTAATTTTGAACACGTTATGGCTTCACTGCCATTTTTTGGGACAAAACTTAAATGAAATACCATAGAACAT 2005 0.4185 MGSQGGAVQEPKTGSLTREGSLYNLTLDEVHNQLGNLGKPLGSMNLDELLKSVWTAESGTDAYMQHGQEASAGSSLNPQGSLTLCGDLSKKTIDEVWRDMQQKKSACKETQPTLGEMTLEDFLVKAGVATEHFSTEDSTMAMSGVDSQHNTSQHAHWMQYQLTSVQQQPQQPQHRHPNQQNNVMPSFSGFMAGHVVPQPIPVVVNPVLDAGYSETMPSSLMGALSDSQSAGKKRIASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSRLEEENERLRRQNEIERVLPSAPPPDPKHQLRRTSSSPL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01442 317 Coils Coil 263 297 - -
Pste5g01442 317 Pfam bZIP transcription factor 247 292 IPR004827 GO:0003700|GO:0006355
Pste5g01442 317 SMART brlzneu 243 300 IPR004827 GO:0003700|GO:0006355
Pste5g01442 317 SUPERFAMILY Leucine zipper domain 247 293 IPR046347 GO:0003700|GO:0006355
Pste5g01442 317 Gene3D - 245 297 - -
Pste5g01442 317 MobiDBLite consensus disorder prediction 282 317 - -
Pste5g01442 317 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 250 265 IPR004827 GO:0003700|GO:0006355
Pste5g01442 317 CDD bZIP_plant_BZIP46 247 292 - -
Pste5g01442 317 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 245 290 IPR004827 GO:0003700|GO:0006355
Pste5g01442 317 MobiDBLite consensus disorder prediction 165 186 - -
Pste5g01442 317 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 16 315 IPR043452 GO:0003700|GO:0045893
Pste5g01442 317 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 245 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01442 Pste-Chr5 9222564 9227419 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01442 1 317 bZIP Transcription Factor Family AT3G56850 55.488 7.52e-105 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste5g01442 bZIP_1 1.9e-12 CL0018