Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01441 ATGGTGCCGCATAAATCTCAAGGTGGTGCTGAACAACTTGCGAATGTAGAGGTTTTAGGTGGATCTGCTGTAAAAAATGCTGCACCTGCTGGGGGAAGTGGGAAACAACGTTTAAGGTGGACATCTGATCTTCATGACCGTTTTGTGGATGCCATTACACAACTTGGTGGACCAGATAGTGGCAGAGATTGTAATTTGAAAGTTGAAACTGCTGGCTTCCTCTTTGTGTGCATGCTAGGTAGGCTAGCAGACATTGCACTTTCCAGAGCAACACCAAAAGGTGTTCTGAGAGTGATGGGTGTTCCTGGACTGACCATTTATCATGTTAAAAGCCATTTACAGAAATATCGCCTAGCGAAGTACTTGCCTGAGTCACCAGCTGATGGTAAAGACTCTAAAGACGAGAAGAGGAATTCTGGGGACAGTATTTCTGGCGCAGATTCTTCCCCGGGAATGCCAATCAATGATGCCTTGAGAATGCAGATGGAGGTTCAGAAACGTCTGCATGAGCAGCTAGAGGTTCAAAAGCAATTACAAATGAGAATTGAAGCACAAGGTAAATACTTGCAAAAGATCATAGAGGAACAGCAGAAATTAGGTAGTACCTTGACAACCTCGGAAACACTCCCTTTGCCACATGATAAGCAAAATCATCCCCAGTCAGAGGCTTCAGGATCTAGTGATGCCCTTGCAAGCACCTTGTCTCCACATAAAAGACAGAGAATCGATGATGGTTCCAAGGATTGTTTCACTGTTTCCCAAGTAAGAAAAAGTGCACAAAACAATGACTGTAATGTTGGTCAGTTGGATCCTAACTTGTATGATGATGCTGGGTTTGGATTTGATTTGGAGACAAAAAAGGATGAAGATAATGAGAGTGGACAATAAGAACTAGTTCCAATTGTAGGTCAATGTGTGTCTCATTGTAATGTGTAGTTTATTTTTCTGGTAGAAAATACAAACCATTTCTAGTAGAAAATACAAACCATGCTATGTAAATTATATTTCACTCAATCCATTTGTACATACTAATGTAGATATAGATGCATTCTTCTCACCCGTTGTGAGAGTCATAAACACTACTCTCCACCCAACATAAATGCTTTGACATGCACTAGACGTGAGGCCATGGATGATGAATGTTGGGTGCAGGATACTTGTCGATGTCTCGGTTGCTATGGTCTAAGTCAATATCAAACGTATCAATTAGATGTTGATTATCACATTGTTTGATCCTTGGAGCCAACCTAATCACGGCAGACAGAGCTTGGTTCTTGTTGAAGATAGTAATGACATGC 1298 0.4145 MVPHKSQGGAEQLANVEVLGGSAVKNAAPAGGSGKQRLRWTSDLHDRFVDAITQLGGPDSGRDCNLKVETAGFLFVCMLGRLADIALSRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGKDSKDEKRNSGDSISGADSSPGMPINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGSTLTTSETLPLPHDKQNHPQSEASGSSDALASTLSPHKRQRIDDGSKDCFTVSQVRKSAQNNDCNVGQLDPNLYDDAGFGFDLETKKDEDNESGQ 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01441 295 NCBIfam myb-like DNA-binding domain, SHAQKYF class 88 119 IPR006447 GO:0003677
Pste5g01441 295 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 60 IPR006447 GO:0003677
Pste5g01441 295 MobiDBLite consensus disorder prediction 205 234 - -
Pste5g01441 295 Coils Coil 155 175 - -
Pste5g01441 295 Gene3D - 34 122 - -
Pste5g01441 295 Pfam MYB-CC type transfactor, LHEQLE motif 152 198 IPR025756 -
Pste5g01441 295 SUPERFAMILY Homeodomain-like 34 118 IPR009057 -
Pste5g01441 295 MobiDBLite consensus disorder prediction 124 141 - -
Pste5g01441 295 MobiDBLite consensus disorder prediction 123 154 - -
Pste5g01441 295 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 34 240 IPR044848 GO:0003700
Pste5g01441 295 MobiDBLite consensus disorder prediction 205 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01441 Pste-Chr5 9216715 9220065 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01441 99 270 G2-like Transcription Factor Family AT2G01060 51.366 1.02e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste5g01441 Myb_CC_LHEQLE 1e-24 No_clan