Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01440 ATGGAAGGGCGTAACTTAACAGCACTTATCGTTGATGATGACAAGGTGATACGAATGGTTCATGGAAAGATTCTGAACAGTGTTGGAGTAAAAATTGAAGTTGCGAAAAATGGAGAAGAAGCCGTAGAAATTCACCGCTTGGGACAAAGTTTTGATCTAATTCTCATGGATAGGGATATGCCTGTCATGAATGGCATTGAGGCGACAAAAACACTTCGATCAATGGGAATTCATAACATAATTGCGGGTGTATCAACAAGGTCAGTGGAAGCACAGATAAGAGAATTTATGGAAGCAGGACTAGATGAGTACCTAGAGAAACCCTTGACCCTTCATAAGCTTACTCCCATCATTCACAAGATCAACAAAACAATCAACTCAGATTAG 387 0.4005 MEGRNLTALIVDDDKVIRMVHGKILNSVGVKIEVAKNGEEAVEIHRLGQSFDLILMDRDMPVMNGIEATKTLRSMGIHNIIAGVSTRSVEAQIREFMEAGLDEYLEKPLTLHKLTPIIHKINKTINSD 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01440 128 CDD REC_hyHK_CKI1_RcsC-like 9 118 - -
Pste5g01440 128 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 124 - -
Pste5g01440 128 Gene3D - 2 126 - -
Pste5g01440 128 ProSiteProfiles Response regulatory domain profile. 7 122 IPR001789 GO:0000160
Pste5g01440 128 Pfam Response regulator receiver domain 9 117 IPR001789 GO:0000160
Pste5g01440 128 SMART REC_2 6 118 IPR001789 GO:0000160
Pste5g01440 128 SUPERFAMILY CheY-like 4 122 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01440 Pste-Chr5 9215826 9216332 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01440 6 118 Response Regulator Gene Family AT3G04280 49.565 6.24e-30 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste5g01440 Response_reg 1.7e-22 CL0304