Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01416 CAGTTAAAAAGGCAAAATAACAGAATATTAAAGGGAGCAGAGGGAGATTCAGCTCTCTCTCTCTCTCTCTTTCCGTAACAAATTGTTGTACTTATTTCTTAGCTGTTCCTCATCACCGTCATCGTTGTCGCTCTCTGCATTTGCCTTCAGCTCTGTTCCTTTTGTAGCGTTTGGAACAGCAAGGGATTTCTGATAAGAACCCAGCTTAGCTTCTCGCTTATTATCACCGACTCACTATTCTCAATCCGTTTCACAACAACAACAACAACAATGGCCGTCGATGAAATTGAAATCGCATCTCCCACCACCTTCTTTTCTGTTTCTTCTTCTTCGGGATCGTTTCACACCCTTTGGGCTGCGATCCTCGGATTGCCTTTGCTCGAACTGGTGGCAATCTGTGCCAACTTGACACTCTTTCTTCTATTTCTCTTCCTTGTTTCGGCGACGAAGCTCTTTGGCAGTGTAAGGGGAAGTGTTAGATTCAGTAAGGACAATGGAACTGCCAATGCCAGTCCCGGTTTTGTTACTCTTGATTTGGGAACACGTCACGTTCGGATTGAAACATGGTTCAAGTTGTCTGTCTTGTCCTGTTTCTATGTTCTGTTGGTGCAAGTTTTCGTTTTGGGGTTTGATGGGGTTGCTTTCATTAGAGGGGTGGATTTGGATTTGGGTTTGGCTCTTCTTTCTGTGCCCCTTGTGCAGGGTTTAGCTTGGGTTGTGTTGAGCTTCTCCGCTTTACAATGCAAATTCAAGACATGCGAGAGGTTTCCAATTTTGCTCAGAATTTGGTGGTTTGTCTTGTTTGTTATTTGTTTGTGTGGTTTGTATGTTGATGGGAGGGGGGTTTGGATGGAAGGTTCCAAGCACCTGCGTTCTCATGTTGTGGCCAATTTCGCTGTCACTCCTGCTCTTGCCTTTTTGTGTATTGTGGCAATCAGGGGTGTTACCGGGATAAAGGTTTATAGGAATTCCGAGAACCAACAGCCTTTGCTTGTTGAGGAAGAACCGGGGTGTCTCAAGGTTACTCCTTATAGTGATGCAGGACTTTTTAGCTTGGCCACTTTGTCTTGGTTGAATTCACTTCTTTCCATTGGGGCAAAAAGGCCACTTGAGCTTAAGGACATTCCCCTTGTTGCGCCAAAAGACCGATCCAAGACATGTTATAAGGTTTTGAATTATAATTGGGAAAGATTGAAGGCTGAAAACCAGCAGCCTTCATTGGCCTTGGCACTTCTCAAGTCATTCTGGAAGGAGGCGGCTTGCAACGCCATATTTGCTGGTGTCACTACTCTTGTCTCGTATGTTGGTCCATATATGATAAGTTACTTTGTTGATTTCTTAGTTGGCAAAGAGATTTTCCCACATGAGGGGTATGCCCTTGCAGGGATATTCTTTGCGGCTAAGCTTGTGGAGACCTTGACTACTAGGCAGTGGTATCTAGGGGTTGACATATTGGGTATGCATATTAGGTCGGCTCTGACCGCAATGGTATATCGAAAGGGGCTAAGGATATCAAGCTTGGCCAAGCAAAGTCACACGAGCGGGGAGATTGTTAACTACATGGCTATTGATGTTCAGAGGGTAGGGGACTACTCTTGGTATCTTCATGACATGTGGATGCTTCCCTTGCAGATTGTTCTTGCCCTTGCAATTTTGTATAAGAATGTTGGAATTGCTTCTTTTGCAACGTTGATTGCTACAATAATTTCCATTGTTGTCACTGTCCCTGTGGCCAGGATCCAAGAAGATTATCAAGACAAGTTAATGGCTGCTAAAGATGAAAGGATGAGAAAAACATCTGAGTGTCTGAGGAATATGAGGATTCTTAAGCTTCAAGCTTGGGAGGACAGATATAGGGTGAAGTTGGAGGAGATGCGTGGAGTAGAGTTCAAGTGGCTTCGGAAAGCCCTCTATTCCCAGGCTTTTATAACTTTCATATTCTGGAGCTCACCTATATTTGTTTCTGCAGTCACTTTTGGTACTTGCATATTGTTGGGTGACCAGCTGACTGCAGGTGGTGTGCTTTCTGCTCTTGCTACTTTCAGGATCCTGCAAGAACCTTTGAGGAATTTTCCGGATTTGGTGTCTACAATGGCTCAGACAAAAGTTTCCCTTGATCGATTATCCGGTTTCCTGCTGGAGGAAGAATTGCAGGAAGATGCAACTATTGTCTTACCACAAGGCATTACTAACATTGCTATAGAAATTAAGGATGGTGTCTTCTGTTGGGACCCTTCTTCATCTTCTAGGCCTACCCTATCAGGGATAAGTATGAAAGTTGAAAAAGGAATGCGTGTGGCTGTTTGTGGCATGGTTGGTGCAGGGAAATCAAGTTTTCTTTCTTGCATCCTTGGAGAGATTCCTAAGCTTTCTGGTGAAGTCAGAGTGTGTGGTTCTGCTGCATATGTCTCCCAATCAGCATGGATACAATCAGGAACTATAGAAGAAAATATCCTCTTTGGAAGCCCAATGGACAAAGCAAAGTACAAGAATGTTCTTCATGCTTGTTCACTGAAAAAGGATTTAGAACTTTTCTCACATGATGATCAGACAATTATCGGGGATAGAGGTATAAACCTGAGCGGTGGCCAAAAGCAGCGGGTTCAGCTTGCACGAGCACTTTATCAAGATGCTGATATTTATCTTCTTGATGATCCCTTCAGTGCAGTTGATGCTCACACTGGATCAGACTTGTTTAGGGAATATATATTGACTGCACTAGCAAATAAAACAGTCATTTTTGTGACCCATCAAGTTGAATTTCTTCCTGCTACTGATTTGATACTGGTTCTTAAAGAAGGATCCATCATACAAGCAGGAAAGTATGACGATCTTTTACAAGCAGGAACTGATTTTAATACTCTGGTTTCAGCTCACCATGAAGCCATAGAAGCTATGGATATCCCTACTCACTCCTCTGAAGATTCAGATGAAAATTTATCTCTTGAGGCATCTGTTATGACCAGTAAGAAATCCATTTGTTCTGCCAACGATATAGACAGTTTGGCAAAGGAAGTACAAGAGGGATCATCTACTTCAGATAAAAAGGCAATTAAGGAGAAGAAGAAAGCAAAGCGATCAAGAAAGAAACAGCTTGTTCAGGAAGAGGAGAGGATTAGAGGTAGAGTCAGCATGAAGGTGTATTTGTCTTACATGGCAGCAGCATATAAAGGCTTATTGATTCCCCTCATAATTATTGCACAAGCATTATTTCAGTTCCTTCAGATTGCTAGCAATTGGTGGATGGCATGGGCTAATCCTCAAACAGAAGGAGACCTGCCCAAAGTAACTCCCTCAGTTCTTCTTCTTGTTTACATGGCCCTTGCTTTTGGCAGTTCATGGTTTATATTTGTAAGGGCTGTTCTGGTGGCTACATTTGGTCTTGCAGCTGCGCAGAAGCTATTTTTGAAAATGCTTAAAAGTGTTTTCCATGCTCCAATGTCTTTCTTTGACTCTACACCAGCTGGAAGGATCTTGAATCGGGTAGGTTCTCTTTTGTCGTCATTTTCTATTTTTTCAATCTATCTCTACCTGTACGGTGCAGATAATTACTATGTGTCATCTGTATCCCACCAGGTATCAATTGATCAAAGTGTAGTGGATCTTGACATTCCTTTTAGACTTGGCGGATTTGCATCAACAACAATACAGCTTATTGGTATTGTTGGTGTAATGACAGAAGTTACATGGCAAGTTTTGCTCTTAGTTGTCCCAATGGCTATTGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCCTCAAGGGAACTGGTTCGTATTGTCAGCATCCAGAAGTCTCCAATTATACATCTTTTTGGTGAATCAATTGCTGGAGCATCCACCATCAGAGGTTTTGGACAAGAAAAAAGGTTCATGAAGCGGAACCTCTATCTTCTTGATTGCTTTGCACGACCATTCTTCTGCAGTCTTTCAGCAATTGAGTGGCTCTGCCTACGGATGGAGTTACTGTCAACCTTTGTATTTGCTTTCTGCATGATATTACTTGTGAGTTTTCCTCGTGGAAGTATCGACCCCAGCATGGCTGGACTTGCTGTGACGTATGGCCTGAATTTAAATGCACGCCTATCACGGTGGATACTCAGCTTTTGCAAACTTGAAAATAAAATTATATCTATTGAGAGAATTTATCAGTACAGCCAAATTCCTAGTGAAGCACCCACAGTTATTGAAGATTCTCGCCCTCCACCATCATGGCCGGAAAATGGGACGATTGAAATAATTGATTTGCAAGTCCGTTACAAGGAGAATCTTCCTTTGGTGCTTCATGGAGTTACATGCACATTTCCTGGTGGCAACAAGATTGGAATAGTTGGGCGTACTGGCAGTGGAAAATCTACTTTAATTCAGGCATTATTTCGATTGATTGAACCAGCAAGTGGGAGTATCCTTATAGACAACATTAATATTTCAGAGATTGGCCTTCATGACCTTCGAGGCCATCTCAGTATCATACCACAAGATCCAACCTTATTTGAAGGGACCATTCGAGGCAATCTTGATCCTCTGGAGGAGCACTCAGATAAAGAGATTTGGGAGGCACTTGATAAGTCTCAGCTGGGAGAGGTTATCCGTGAGAAAGGACAACAGCTTGATACACCAGTTCTCGAAAATGGAGATAATTGGAGTGTAGGACAGCGACAACTTGTTGCTCTAGGCCGAGCTCTGCTGCAGCAGTCGAGAATACTTGTACTGGATGAAGCAACGGCATCAGTTGATACTGCCACAGATAATCTTATCCAGAAGATTATTAGAAGTGAGTTCAAAGACTGCACTGTTTGCACCATTGCGCATCGTATACCTACTGTCATTGACAGTGATCAAGTTCTTGTGCTCAGTGATGGTCGAGTTGCAGAGTTTGACACTCCTTCAAGACTATTGGAGGATAAGTCATCCATGTTTCTTAAATTGGTGACTGAGTATTCATCGCGTTCAAGTGGTATACCAGATTTTTAG 4974 0.427 MAVDEIEIASPTTFFSVSSSSGSFHTLWAAILGLPLLELVAICANLTLFLLFLFLVSATKLFGSVRGSVRFSKDNGTANASPGFVTLDLGTRHVRIETWFKLSVLSCFYVLLVQVFVLGFDGVAFIRGVDLDLGLALLSVPLVQGLAWVVLSFSALQCKFKTCERFPILLRIWWFVLFVICLCGLYVDGRGVWMEGSKHLRSHVVANFAVTPALAFLCIVAIRGVTGIKVYRNSENQQPLLVEEEPGCLKVTPYSDAGLFSLATLSWLNSLLSIGAKRPLELKDIPLVAPKDRSKTCYKVLNYNWERLKAENQQPSLALALLKSFWKEAACNAIFAGVTTLVSYVGPYMISYFVDFLVGKEIFPHEGYALAGIFFAAKLVETLTTRQWYLGVDILGMHIRSALTAMVYRKGLRISSLAKQSHTSGEIVNYMAIDVQRVGDYSWYLHDMWMLPLQIVLALAILYKNVGIASFATLIATIISIVVTVPVARIQEDYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRVKLEEMRGVEFKWLRKALYSQAFITFIFWSSPIFVSAVTFGTCILLGDQLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRLSGFLLEEELQEDATIVLPQGITNIAIEIKDGVFCWDPSSSSRPTLSGISMKVEKGMRVAVCGMVGAGKSSFLSCILGEIPKLSGEVRVCGSAAYVSQSAWIQSGTIEENILFGSPMDKAKYKNVLHACSLKKDLELFSHDDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSDLFREYILTALANKTVIFVTHQVEFLPATDLILVLKEGSIIQAGKYDDLLQAGTDFNTLVSAHHEAIEAMDIPTHSSEDSDENLSLEASVMTSKKSICSANDIDSLAKEVQEGSSTSDKKAIKEKKKAKRSRKKQLVQEEERIRGRVSMKVYLSYMAAAYKGLLIPLIIIAQALFQFLQIASNWWMAWANPQTEGDLPKVTPSVLLLVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFLKMLKSVFHAPMSFFDSTPAGRILNRVGSLLSSFSIFSIYLYLYGADNYYVSSVSHQVSIDQSVVDLDIPFRLGGFASTTIQLIGIVGVMTEVTWQVLLLVVPMAIACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLSAIEWLCLRMELLSTFVFAFCMILLVSFPRGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPTVIEDSRPPPSWPENGTIEIIDLQVRYKENLPLVLHGVTCTFPGGNKIGIVGRTGSGKSTLIQALFRLIEPASGSILIDNINISEIGLHDLRGHLSIIPQDPTLFEGTIRGNLDPLEEHSDKEIWEALDKSQLGEVIREKGQQLDTPVLENGDNWSVGQRQLVALGRALLQQSRILVLDEATASVDTATDNLIQKIIRSEFKDCTVCTIAHRIPTVIDSDQVLVLSDGRVAEFDTPSRLLEDKSSMFLKLVTEYSSRSSGIPDF 1567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01416 1567 CDD ABCC_MRP_domain1 644 845 - -
Pste5g01416 1567 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 644 868 IPR003439 GO:0005524
Pste5g01416 1567 Pfam ABC transporter transmembrane region 334 598 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g01416 1567 Pfam ABC transporter transmembrane region 1096 1245 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g01416 1567 Pfam ABC transporter transmembrane region 973 1074 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g01416 1567 Gene3D - 626 888 IPR027417 -
Pste5g01416 1567 Pfam ABC transporter 663 797 IPR003439 GO:0005524
Pste5g01416 1567 Coils Coil 925 948 - -
Pste5g01416 1567 CDD ABC_6TM_ABCC_D1 331 618 IPR044746 GO:0140359
Pste5g01416 1567 Gene3D ABC transporter type 1, transmembrane domain 306 625 IPR036640 GO:0005524|GO:0016020
Pste5g01416 1567 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 254 1558 - -
Pste5g01416 1567 FunFam ABC transporter C family member 10 313 626 - -
Pste5g01416 1567 CDD ABCC_MRP_domain2 1319 1539 - -
Pste5g01416 1567 MobiDBLite consensus disorder prediction 915 941 - -
Pste5g01416 1567 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1311 1551 IPR027417 -
Pste5g01416 1567 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1321 1555 IPR003439 GO:0005524
Pste5g01416 1567 FunFam ABC transporter C family member 5 629 877 - -
Pste5g01416 1567 SUPERFAMILY ABC transporter transmembrane region 958 1078 IPR036640 GO:0005524|GO:0016020
Pste5g01416 1567 SUPERFAMILY ABC transporter transmembrane region 1092 1301 IPR036640 GO:0005524|GO:0016020
Pste5g01416 1567 SUPERFAMILY ABC transporter transmembrane region 319 624 IPR036640 GO:0005524|GO:0016020
Pste5g01416 1567 CDD ABC_6TM_ABCC_D2 971 1296 IPR044726 GO:0140359
Pste5g01416 1567 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 640 867 IPR027417 -
Pste5g01416 1567 ProSitePatterns ABC transporters family signature. 770 784 IPR017871 GO:0005524|GO:0016887
Pste5g01416 1567 Pfam ABC transporter 1338 1486 IPR003439 GO:0005524
Pste5g01416 1567 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 333 610 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g01416 1567 Gene3D - 1304 1557 IPR027417 -
Pste5g01416 1567 SMART AAA_5 672 845 IPR003593 GO:0016887
Pste5g01416 1567 SMART AAA_5 1347 1532 IPR003593 GO:0016887
Pste5g01416 1567 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 973 1274 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g01416 1567 FunFam ABC transporter C family member 3 1304 1556 - -
Pste5g01416 1567 Gene3D ABC transporter type 1, transmembrane domain 932 1302 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01416 Pste-Chr5 9021016 9028670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01416 644 902 Calmodulin-binding Proteins AT2G36910 28.520 1.43e-21 100