Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01414 ATGTCTCTGATAATTCCTATTTTTTTCAATATTTTCAAATTTTGGTCTGAAATTGAATGTTTTGCTCTGTCATTATTCATTTTGGAAGACATGGTGAATCCGGGATTCTTTTCTGGGAATAAGTCCGTGAATTCGGTTAAAGTAAGCTTTCAGATACCCTATTTTACCGAATGGGGTCAGAGCTTGCTGGTGTGTGGCTCCGTACCTTTGCTTGGCTCCTGGAATGTGAAGAAGGGTGTGTTGCTCAGCCCCATTCATCAAGGGAGTGAGCTCATCTGGGGTGGAAGCATCACTGTGCCAAAGGGGTTCCAATGCCAGTACAGCTATTATGTTGTAGATGATAACAAAAATGTACTGAGATGGGAGATGGGGAAGAAGCGCGAATTGATACTGCCTGGAGGTATTCAGAGTGGCCAGGAGATTGAGTTCCACGATCTTTGGCAGACAGGTTCAGATACCCTCCCTTTCAGAAGTGCTTTCAAAGATGTTATTTTTCGGCAAATAGAAGCTATATTGGTCCAATTCAAAATCTCCTGCCCAAATGTTGAGGAAGACACATCAATATATGTCATCGGTAGCAATACAAAGTTGGGGCAGTGGAAAGTTGAAAATGGACTAAAACTCAGCTATTTTGGTGAATCTATCTGGAAAGCTGAATGTGTGATGCAAAAGAGGGATTTTCCCCTAAAATATCCATTTTGGACTTTTCATCATAAATAA 720 0.4111 MSLIIPIFFNIFKFWSEIECFALSLFILEDMVNPGFFSGNKSVNSVKVSFQIPYFTEWGQSLLVCGSVPLLGSWNVKKGVLLSPIHQGSELIWGGSITVPKGFQCQYSYYVVDDNKNVLRWEMGKKRELILPGGIQSGQEIEFHDLWQTGSDTLPFRSAFKDVIFRQIEAILVQFKISCPNVEEDTSIYVIGSNTKLGQWKVENGLKLSYFGESIWKAECVMQKRDFPLKYPFWTFHHK 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01414 239 Pfam Starch binding domain 171 231 IPR002044 GO:2001070
Pste5g01414 239 Pfam Starch binding domain 46 137 IPR002044 GO:2001070
Pste5g01414 239 SUPERFAMILY Starch-binding domain-like 44 147 IPR013784 GO:0030246
Pste5g01414 239 Gene3D Immunoglobulins 166 238 IPR013783 -
Pste5g01414 239 Gene3D Immunoglobulins 38 149 IPR013783 -
Pste5g01414 239 SUPERFAMILY Starch-binding domain-like 171 235 IPR013784 GO:0030246
Pste5g01414 239 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 40 149 IPR002044 GO:2001070
Pste5g01414 239 CDD CBM20_DPE2_repeat1 47 147 IPR034840 GO:2001070
Pste5g01414 239 SMART CBM_20_2 45 141 IPR002044 GO:2001070
Pste5g01414 239 PANTHER - 43 235 - -
Pste5g01414 239 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 165 239 IPR002044 GO:2001070
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01414 46 233 Glycoside Hydrolase AT2G40840 53.623 7.27e-72 234