Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01413 CAACAATGATTTGAGCTTAAGACAAGGTTACTCTTTACGTGTGGTTCACATGTAAGAGACCCCCCTCATTTGATGTTACTGCTATTTCTCAAAGCCATCGTCAAAGGTTTCTCCTTTTTACCACCGTCTTTTCCATCACACCATCTTTGTGTTTGTGAGTGTGTGAAATCTGTGAAGTGAGGTGAGTTGGGGATAAAATCATAGAGACAACCAGTTAAGTCTCTGTTTAAGTTTTTTTGTTTTTGTAAAATGCACACAGAGAAATTCAGTGTTTTTTTGGGTTTTTCGAGTTTCACATAAAGAATTTTTTTGTGGGTTTACGATGTTTTGATGATTAATTTCTGGGTTTGATAGTAGTGAATGTGGAAATAATTACCAATTGGTGAGAGAGAAAGTTGAGTTTCTGTTTCTGGGTTTGATAGTAGTTGGGTTTGGGGTGTATGTGTATTATGTAGAGGTAGCAATAATTACCAATTGCTTGAGAGAGAGGTTTTTTTTTAGAAGGGGGAGAAAGGTGAGTTCTTTGCTTTTGTCTGGTGATTCAATAATCTTGCATCTCTTGGGATGGCTGTGGTAAGTCCTGTGCCTGCAACAATGCAAACTATGGATTCTGTGAGGTCACTTTCTGATGATAGTGGAGAAATTTTGGAGGAGCCTAATCCAATTGTGGTCGATCAGCCAATCTATGTTGCTGTGACAAAAGAGGTGAAGGAGAGCAAATTAAATCTGACATGGGCAATACAGAACTCAGGCGGAAAGAAGATTTGCATTCTTTATGTTCATGTTCCTGCAACAATGATTCCCCTATTGGGAGGTAAATTTCCCACAAGTGCACTAAAAGAGGAGCAGGTTCAAGCATACTGGGAAGAAGAAAGGCAAGGCATGCATAGGACTTTGGATGAATATCTTCATATTTGTCTACGAATGGGGGTGCGAGCAGAGAAAGTGCATATTGAAATGGATAGCATTGAAAAAGGAATATTAGAACTTATCTCTCAACATGGCATCCAAAAGCTTGTTATGGGAGCAGCATCTGATAAGTACTATAGTAGGAGAATGATGGACCTCAGATCTAAGAAATCCATCTATGTACATAAACAAGCTCCAGCTTATTGTCATGTACAGTTTGTCTGCAAAGGACACCTTATACACACAAGGGATCGTAGTCTGGATGAAGGTAATGCAGAGGTTGCATCTCCTTTGGTGCAGCAAGTGCCAAACTCTGTGAGATCTCAATCTGTTACTCTTGGACAAGATCATCGAGCAAACCTAGCAAATCCCAGTCTAGAATTTTTCCGGAGAGTAAGGTCTGCCAATGATGGACGTGGAGCAAACTTTTTGGCTGTTTCTTCTCCAGAAGAGACTGAAGGATTTTCAACTCCACGTGACAGGATGGGTACAGACGTAAGTTCTGATGAATCAGATAGATTGTCAAGGATGAGTCCTTCTGGCTTATCAACATGCTCTGACAGTGCAGTTGAACTAGCATTGGCCCCAAATTTGATTACCGAAAGCAGTGAGAATGCATTTGAGTTGACTTTGAGTCCCCAGATTATAAAGGATCTTCATCATTCATCTCCTGCTAGTGCACTGGATGGTGGAATGAATGATACTATCTACAACCAGCTTGAACAGGTTAGGGTTGAAGCTGAGACTGCTACTCTAAATGCATTTCAAGAAACTGTAAGGTGTAGGAAAGCTGAAAAAGATGCCTTTGAAGCTCTACGCAAGGCTAAAGCTTCTGAAAGATTATATACAGAGGAATTGAACCAGAGGAAAATGGCAGAGGAACTACTTAAGAAAGAAAAAGAACAACTTGAGAATATGAAGAGCCTGAGAGACAAGGTTAAGGAAGAACTCCGTTGCGCTGTTGATCAGAAGGCATCACTAGAGAATCAAATTGCATCAGCTGAACTTATGATAAAGGAGTTGGAGCAGAAGATTGTATCTGCTGTGGATCTGTTACAAAGCTACAAGAATGAACGAGATGAATTGCAGATGCAGCGCGATAATGCATTGAGAGAAGCTGAAGAGTTGAGGAGAAAACAAGGAGAGGCCTCTGGCACCCATGTCCCACAGTTGTTCTCAGAATTCTCTTTTTCAGAGATTAAGGAAGCAACAAGTAACTTCAGTCCATCCTCAAAGATTGGAGAAGGGGGATATGGAAGTATATTTAAAGGTGTCTTGCGTCACACTGAGGTGGCTATAAAAATGTTGCACTCCAACAGCATGCAAGGACCCTTGGAGTTTCAACAGGAGGTTGATGTGTTGAGCAAGCTAAGACATCCCAATCTTATCACACTCATAGGAGCATGCCCAGAATCATGGGCTCTTGTCTATGAGTATTTACCCAATGGAAGCCTTGAAGATCGTCTTGCATGCAAGGATAATACCCCTCCGTTATCCTGGCAAGCTCGAATTCGAATTGCTGCTGAACTATGCTCTGCTCTCATCTTTCTCCATTCCAGTAAACCTCACAGCATAGTGCATGGTGACTTAAAACCCTCCAATATTCTCCTGGATGCAAACCTTATGAGCAAGCTCAGTGACTTTGGAATATGTCGTATACTATCCAACAGCGAGAGCTCTAGTAGCAATACTACAGAGTTTTGGAGAACTGACCCCAAAGGAACTTTTGTCTACATGGATCCTGAATTCCTTGCCTCAGGGGAACTGACTCCAAAGTCAGATGTATATTCATTCGGAATCATATTACTGAGATTATTGACTGGGAGACCGGCCTTGGGAATAACAAAGGAAGTGAAATATGCATTAGATACTGAAAAGTTGAAATCCCTATTGGATCCTTTGGCTGGAGACTGGCCATTCGTGCAGGCCGAACAGTTGGCTCACTTGGCTTTGAGGTGTTGCGATATGAATAGAAAGAGGCGGCCGGACCTTTATTCTGATGTGTGGAGGATGGTTGATGCAATGAGGGTTTCTTCTGGAGGCACAAACTCTTTTGGACTAAGTTCTGAAGGGCTTTTACAACCTCCTTCGTATTTTACTTGCCCAATCTTCCAGGAAGTTATGCGAGATCCACATGTAGCTGCAGATGGTTTTACTTATGAAGCTGAAGCTATACGAGGATGGCTTGATGGGGGTCATCACAATTCACCAATGACAAATAGTAAGCTTGCACATCACAATCTTGTTCCCAACCGCGCTCTCCGCTCTGCAATCCAAGACTGGCTTCAAAACCACTGATCAACCTCATTATTTTTCCCTCCACTGTATATCTATCTCCCTGTTTATAACATTTATAGGATACAAACTTGTCATTTCATTTTGTTACCTTATGTCAGTTTTGTTTCCTGTGCTTCTTCAATCACATTTTACACATATCCTCTTCTTCTATAGGTTGCATAATCATGTCATATCTTACAATAGTTGTAAAGTACTCATCATAACTTATACGATTATCTTTAGCATTTTGCAATGTTTGAGTCATGAGA 3455 0.4116 MAVVSPVPATMQTMDSVRSLSDDSGEILEEPNPIVVDQPIYVAVTKEVKESKLNLTWAIQNSGGKKICILYVHVPATMIPLLGGKFPTSALKEEQVQAYWEEERQGMHRTLDEYLHICLRMGVRAEKVHIEMDSIEKGILELISQHGIQKLVMGAASDKYYSRRMMDLRSKKSIYVHKQAPAYCHVQFVCKGHLIHTRDRSLDEGNAEVASPLVQQVPNSVRSQSVTLGQDHRANLANPSLEFFRRVRSANDGRGANFLAVSSPEETEGFSTPRDRMGTDVSSDESDRLSRMSPSGLSTCSDSAVELALAPNLITESSENAFELTLSPQIIKDLHHSSPASALDGGMNDTIYNQLEQVRVEAETATLNAFQETVRCRKAEKDAFEALRKAKASERLYTEELNQRKMAEELLKKEKEQLENMKSLRDKVKEELRCAVDQKASLENQIASAELMIKELEQKIVSAVDLLQSYKNERDELQMQRDNALREAEELRRKQGEASGTHVPQLFSEFSFSEIKEATSNFSPSSKIGEGGYGSIFKGVLRHTEVAIKMLHSNSMQGPLEFQQEVDVLSKLRHPNLITLIGACPESWALVYEYLPNGSLEDRLACKDNTPPLSWQARIRIAAELCSALIFLHSSKPHSIVHGDLKPSNILLDANLMSKLSDFGICRILSNSESSSSNTTEFWRTDPKGTFVYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVKYALDTEKLKSLLDPLAGDWPFVQAEQLAHLALRCCDMNRKRRPDLYSDVWRMVDAMRVSSGGTNSFGLSSEGLLQPPSYFTCPIFQEVMRDPHVAADGFTYEAEAIRGWLDGGHHNSPMTNSKLAHHNLVPNRALRSAIQDWLQNH 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01413 880 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 51 163 - -
Pste5g01413 880 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 809 880 IPR013083 -
Pste5g01413 880 SUPERFAMILY RING/U-box 804 879 - -
Pste5g01413 880 CDD STK_N 39 192 - -
Pste5g01413 880 Pfam Protein kinase domain 525 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01413 880 MobiDBLite consensus disorder prediction 269 287 - -
Pste5g01413 880 SUPERFAMILY Protein kinase-like (PK-like) 502 780 IPR011009 -
Pste5g01413 880 Coils Coil 397 494 - -
Pste5g01413 880 Gene3D HUPs 33 158 IPR014729 -
Pste5g01413 880 ProSiteProfiles Protein kinase domain profile. 522 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01413 880 SMART Ubox_2 813 876 IPR003613 GO:0004842|GO:0016567
Pste5g01413 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Pste5g01413 880 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 497 594 - -
Pste5g01413 880 SMART serkin_6 522 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01413 880 MobiDBLite consensus disorder prediction 263 297 - -
Pste5g01413 880 CDD RING-Ubox_WDSUB1-like 811 866 - -
Pste5g01413 880 ProSitePatterns Protein kinases ATP-binding region signature. 528 549 IPR017441 GO:0005524
Pste5g01413 880 Gene3D Phosphorylase Kinase; domain 1 493 594 - -
Pste5g01413 880 Pfam U-box domain 811 880 IPR003613 GO:0004842|GO:0016567
Pste5g01413 880 PANTHER OS02G0152300 PROTEIN 40 875 - -
Pste5g01413 880 Gene3D Transferase(Phosphotransferase) domain 1 595 798 - -
Pste5g01413 880 ProSiteProfiles U-box domain profile. 809 880 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01413 Pste-Chr5 9005285 9013994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01413 1 880 U-box Gene Family AT2G45910 52.703 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pste5g01413 Pkinase 1.9e-44 CL0016