Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01401 ATGAAGAACAAGATGCAAATTAAAATCCAGCTTTTCATCTTCTTCTGTTACATTGGTTATTTCTATTGTGGTTTTGCTGTTGCTGCCACAAATGAAGTATCAGCTTTGCTTTCTATAAGAGCAGGCCTTGTTGATCCTTTGAACACCCTTCAGGATTGGAAACTGCATGACAAAGGACCAGGAAAGGATGCAGCTCATTGCAATTGGATTGGCATCAAATGCAACTCAGCTGGAGCTGTAGATAAGCTTGATCTCTCCCACAAGAATCTCAGTGGCAGAGTATCCAATGATATACAAAGACTTAAAAGTCTTACTTCACTCAACTTGTGTTGCAATGCTTTTTCAACACCATTGCCAAAATCCATAGCCAATCTAACCACACTCAACAGCCTTGATGTAAGTCAAAATTTCTTCATTGGTGACTTTCCATTAGGCTTTGGAAGGGCATGGAGACTTACAGCCTTAAATGCATCCAGTAATGAGTTCTCAGGTTCTCTTCCTGAGGACCTTGGTAATGCCACTTCCTTAGAGATGCTTGATCTCAGAGGAAGCTTTTTCGTAGGATCAATTCCAAAATCATTCAGTAACTTGCATAAGTTGAAGTTCCTTGGTTTATCTGGGAACAATCTCACTGGTAAAATTCCTGGCGAGCTGGGACAACTTTCATCACTGGAGTATATGATCCTTGGATATAATGAATTTGAAGGTGGCATTCCAGAAGAGTTTGGCAACCTCACCAATCTTAAATATCTTGATTTAGCAGTAGCCAATCTTGGTGATGAGATTCCAGGTATATTGGGAGAACTCAAGTTGTTAAATACAGTTTTCTTATACAACAACAATTTTGAAGGCCGAGTTCCACCAGCAATTGGCAATATGACCTCTTTGCAGTTGCTGGATCTTTCTGATAACACGTTGTCGGGAAAAATTCCAGCTGAAATAAGTCAGCTGAAGAATTTGAAGCTTCTGAACTTGATGGGCAACCAGCTGTCAGGTCCTGTGCCTTCTGGCTTTGGAGATTTGCCACAACTGGAGGTACTTGAGCTATGGAACAATTCTTTGTCAGGGCCATTGCCTAGTAACCTTGGTAAGAATTCTCCACTGCAATGGTTGGATGTGTCATCAAATTCACTCTCTGGAGAGATTCCAGAAACTCTTTGCAGCCAGGGCAATCTCACTAAACTCATACTATTCAACAATGCCTTCTCTGGTCCAATTCCATCAAGCCTATCAATGTGTTCTTCACTTGTTCGTGTTCGAATTCAGAACAATTTTCTTTCTGGGACAGTTCCTGTGGGTCTTGGCAAGCTAGGGAAGCTTCAAAGATTAGAATTGGCTAACAATAGTCTCTCTGGTGGAATTCCAGATGACATTGCTTCTTCCACATCTCTTTCTTTCATTGATCTCTCAAGAAACAAACTCCATTCTTCTCTTCCCTCCACTGTCCTTTCCATTCCTAACCTGCAAGCTTTCATGGTTTCCAACAACCACTTGGAAGGTGAAATCCCAGACCAATTCCAGGACTGTCCATCACTTGCAGTTCTTGACCTCTCATCAAATCATCTATCTGGAAGCATTCCTGCAAGCATCGCTTCATGTCAGAAATTGGTAAATTTGAACCTCCAAAATAACCAATTGACTGGTGAAATCCCAAAAGCATTAGCTAAAATGCCTACATTGGCCATGCTTGATCTTTCCAACAATTGTCTGACAGGCCAGATACCTGAAAGCTTTGGAATTTCTCCAGCTCTAGAAGCACTCAATGTTTCATACAATAAGCTAGAAGGTCCAGTCCCAGCAAATGGAATACTAAGAACTATAAACCCAAATGATTTTGTGGGCAATGTTGGCCTATGTGGTGGTGTCCTCCCTCCTTGTGACCAAAACTCAGCCTACTCATCAAAGCATGGAGGCTCACACCCAAAGCACATAATTACAGGGTGGATCGCGGGAATATCTTCAATCCTAGTTATTGGGGTTGCAATTTTGGTGGCAAGATCTTTGTACTTAAGATGGTACACGGACGGGTTTTGCTTCCAAGAAAGATTTTATAAGGGTAGCAAAGGATGGCCCTGGAGATTGATGGCATTTCAGAGGCTTGGATTTACAAGTACTGATATTCTAGCGTGCATAAAGGAAACAAATGTGATTGGCATGGGAGCCACAGGGGTTGTTTACAAGGCTGAGGTACCACAATCAAATACAGTTGTAGCAGTGAAAAAATTGTGGAGAACAGGAACTGATATTGAAGTAGGAAGCAGTGATGACCTTGTGGGAGAGGTGAATGTTTTAGGGAGGCTAAGGCATAGGAACATTGTTAGACTATTAGGATTTCTTCATAATGACATTGATGTTATGATAGTTTATGAATTCATGCACAATGGCAACCTGGGAGATGCCTTACATGGTAGACAAGCAACAAGATTTCTGGTAGACTGGGTTTCACGGTATAACATAGCTCTAGGAGTTGCACAAGGACTTGCTTATCTTCATCATGATTGTCATCCACCTGTTATCCATCGAGATATCAAGTCCAATAATATATTGCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGTTTAGCCAAGATGTTGATCCGGAAGAATGAAACAGTCTCCATGGTTGCTGGATCCTATGGCTACATTGCCCCTGAATATGGGTATGCATTGAAGGTGGATGAAAAGATTGATGTTTACAGTTATGGAGTAGTTTTGTTGGAGCTTCTCACAGGGAAGAGGCCCTTAGATCCAGACTTTGGAGAGTCAATAGACATAGTAGAGTGGATTAGAATGAAGATTAGAGACCACAAATCTCTAGAAGAAGCATTAGACCCCAGTGTAGGAAACAGCAGGCATGTTCTAGAAGAGATGCTTTTAGTTCTAAGAATAGCAATTCTTTGCACTGCCAAGCTCCCCAAGGATAGACCAACCATGAGGGATGTCACAATGATGCTTGGAGAGGCAAAGCCTCGTAGAAAGAGCAGTAGCAACGATGCAGCTAACAGCAAAGAGATCCCAATTTTTAGCACATCACCAGTTAATAATAGCCTTGTGTAGGAAGTAGGAACCAAAAATCACTTTGTCCTGTCCATTCACCAGTTTAGAGCTGTAATTTTTGTAATCAGCAATTCGTATTTATCTTTAAAATATTAATTGGTATATCAAGATGTATTGATTTTTGCAAATAAACTTCTTTTGTATCCCGATAAAGCAATTGT 3224 0.4104 MKNKMQIKIQLFIFFCYIGYFYCGFAVAATNEVSALLSIRAGLVDPLNTLQDWKLHDKGPGKDAAHCNWIGIKCNSAGAVDKLDLSHKNLSGRVSNDIQRLKSLTSLNLCCNAFSTPLPKSIANLTTLNSLDVSQNFFIGDFPLGFGRAWRLTALNASSNEFSGSLPEDLGNATSLEMLDLRGSFFVGSIPKSFSNLHKLKFLGLSGNNLTGKIPGELGQLSSLEYMILGYNEFEGGIPEEFGNLTNLKYLDLAVANLGDEIPGILGELKLLNTVFLYNNNFEGRVPPAIGNMTSLQLLDLSDNTLSGKIPAEISQLKNLKLLNLMGNQLSGPVPSGFGDLPQLEVLELWNNSLSGPLPSNLGKNSPLQWLDVSSNSLSGEIPETLCSQGNLTKLILFNNAFSGPIPSSLSMCSSLVRVRIQNNFLSGTVPVGLGKLGKLQRLELANNSLSGGIPDDIASSTSLSFIDLSRNKLHSSLPSTVLSIPNLQAFMVSNNHLEGEIPDQFQDCPSLAVLDLSSNHLSGSIPASIASCQKLVNLNLQNNQLTGEIPKALAKMPTLAMLDLSNNCLTGQIPESFGISPALEALNVSYNKLEGPVPANGILRTINPNDFVGNVGLCGGVLPPCDQNSAYSSKHGGSHPKHIITGWIAGISSILVIGVAILVARSLYLRWYTDGFCFQERFYKGSKGWPWRLMAFQRLGFTSTDILACIKETNVIGMGATGVVYKAEVPQSNTVVAVKKLWRTGTDIEVGSSDDLVGEVNVLGRLRHRNIVRLLGFLHNDIDVMIVYEFMHNGNLGDALHGRQATRFLVDWVSRYNIALGVAQGLAYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMLIRKNETVSMVAGSYGYIAPEYGYALKVDEKIDVYSYGVVLLELLTGKRPLDPDFGESIDIVEWIRMKIRDHKSLEEALDPSVGNSRHVLEEMLLVLRIAILCTAKLPKDRPTMRDVTMMLGEAKPRRKSSSNDAANSKEIPIFSTSPVNNSLV 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01401 1020 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 29 184 - -
Pste5g01401 1020 Pfam Leucine rich repeat 175 233 IPR001611 GO:0005515
Pste5g01401 1020 Pfam Leucine rich repeat 486 546 IPR001611 GO:0005515
Pste5g01401 1020 Pfam Leucine rich repeat 272 330 IPR001611 GO:0005515
Pste5g01401 1020 Gene3D Ribonuclease Inhibitor 339 634 IPR032675 -
Pste5g01401 1020 Gene3D Ribonuclease Inhibitor 29 193 IPR032675 -
Pste5g01401 1020 FunFam MDIS1-interacting receptor like kinase 1 796 1006 - -
Pste5g01401 1020 SUPERFAMILY RNI-like 262 599 - -
Pste5g01401 1020 Pfam Protein kinase domain 713 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01401 1020 PANTHER UNNAMED PRODUCT 175 918 - -
Pste5g01401 1020 FunFam MDIS1-interacting receptor like kinase 1 711 795 - -
Pste5g01401 1020 SUPERFAMILY Protein kinase-like (PK-like) 707 987 IPR011009 -
Pste5g01401 1020 ProSiteProfiles Protein kinase domain profile. 711 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01401 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 838 850 IPR008271 GO:0004672|GO:0006468
Pste5g01401 1020 SMART serkin_6 711 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01401 1020 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 368 630 - -
Pste5g01401 1020 Gene3D Phosphorylase Kinase; domain 1 711 795 - -
Pste5g01401 1020 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 185 285 - -
Pste5g01401 1020 Pfam Leucine rich repeat N-terminal domain 31 75 IPR013210 -
Pste5g01401 1020 Gene3D Ribonuclease Inhibitor 272 338 IPR032675 -
Pste5g01401 1020 Gene3D Ribonuclease Inhibitor 205 271 IPR032675 -
Pste5g01401 1020 MobiDBLite consensus disorder prediction 987 1007 - -
Pste5g01401 1020 Gene3D Transferase(Phosphotransferase) domain 1 796 1013 - -
Pste5g01401 1020 SMART LRR_typ_2 437 461 IPR003591 -
Pste5g01401 1020 SMART LRR_typ_2 341 365 IPR003591 -
Pste5g01401 1020 SMART LRR_typ_2 197 221 IPR003591 -
Pste5g01401 1020 SMART LRR_typ_2 509 533 IPR003591 -
Pste5g01401 1020 SMART LRR_typ_2 485 508 IPR003591 -
Pste5g01401 1020 SMART LRR_typ_2 293 317 IPR003591 -
Pste5g01401 1020 SMART LRR_typ_2 101 125 IPR003591 -
Pste5g01401 1020 SUPERFAMILY L domain-like 66 312 - -
Pste5g01401 1020 ProSitePatterns Protein kinases ATP-binding region signature. 717 741 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01401 Pste-Chr5 8957065 8960399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01401 10 1015 Receptor kinase-like Gene Family AT1G08590 60.039 0.0 1171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste5g01401 Pkinase 1.7e-46 CL0016