Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01384 ATGGGAAGGATTGTAACTCAAAAAAAAGGTGAGATCCGAGAACTAATTGATAAAGGGCATTTTGACGTAGTAGCTCAAGAAATGCCACATGTTTTGGTAGATGAATTGCCTCTAGAGGCCACGGTAGGTCTAGAATCAACCTTTGACGACCTTGGTGCATGTTTTGATGACGATCATGTAGGAGTTATTGGCTTGTATGGCATGGGGGGTGTAGGAAAGACAACCCTTCTCAAAAAGTTCAATAACGAGTTCCTTCCCTCAAAATTCTATGATGTAGTCATCTGGGTTGTGGTGTCTAAAGAAGCGGACATAGAGAGTGTTCAACAAAACAAACAGGAAAAGTTAAATGTTCCTGATGGTAAATGGGCTGATCTTCTGAAGTTGGGGATTCCTCTTCCTGACATGAACAACGGGTCTAAAGTGATATTCACAACACGATCCATGGAGGTTTGCAGGTACATGGATGCCAATAGATGCATCAAAGTAGAATGTTTGGCACCAAAGGAAGCATTTGAATTGTTCAAAGAGAAAGTGGGTGAAGAAACTCTCAACTCTCATCCTGAAATATTTCATCTGGCCCAAATTGTGGCCAAGGAATGTGAGGGACTTCCACTGGCTCTTATCACTGTTGGGAGATCCATGGCTAGAAAGACTCTACCTGAATGGAAACGAGCAATACGAACTTTGAAGAATTATCCATCAAGATTTTCAGGTATCGTTGACTATGTCTATTGTTTGCTTGAATTTAACAGTTTGCCAAGTGCCATACACAAGTCTTGTTTCTTGTACTGTTCCATCTTCCCTGAGGACTATAATATTAGAATAGATGAACTCATTCAACCGTGGATTGCGGAAGGCCTTCTAGCTGAATTTGGTGATGATGTCTATGAAGCGCGTAATCAAGGAGAAGAAATCATAGCAAGCTTAAAGTTTGCTTGTTTGTTGGAAGACAGAAAGAGAGAAAATAGGATTAAGATGCATGATGTGATAAGAGACATGGCTTTGTGGCTAGCATTTAATCATGGATCAAACTCCAGAAATACTGAGCTAACCAACTTTCCTGATGAGATCTTTCGGACTTCAAACTATCTTAGAGTGTTAGACTTGTCAGGTAATAAAAGAGTAAAAAAATTACCTGCAAGTATTGGGGAGTTAGTTCACCTACAGCATTTGGATCTATCAGGTACCGATATACAAGAATTGTCAAGGGAGCTCCAGAACTTGAAAAAATTAAGGTGCCTGCTGCTAAATTGTATTTGCAACATGCTTGTCTTCCCAAGGAGTTTGATTTCAAGTTTGTTGTCATTGCAAGTGTTTAGCAAATTACCATGGGAAGATCAATGCATTCTTCCTGACTTGGGGGAACCTGAGGAAACTATCTTGTTACAAGAATTAGAATGCTTGGAAAAACTTCAAGACATCCGTATTTCTCTCTTTTGCTTTTCATCTATGCAAGTATTACTGAAATCTCCCAAATTGCAAAGATGCATCAGACATCTGAGAGTAATTTCTCGTTTCAATTCAACGCCACATGTTATATTATTCTCATTATTGAGTAAAATGCAACATCTAGAGGCATTGTCCATAACTATTTCTTCATCTCCAAGTTTAGATTATGATAGGAAAACGGAATATTCATCACAGGATTCTATGACTGATTGTATTCCCACGAGCTCTAAGTTTACTGAGCATGATTACACTGTTGGCCTTCGTGAGTTATCACTTGAAGGGTGTGGCATGTTCAACTTGAGTTGGCCCACTTGTGCTCCAAGCCTTCAACTCCTTAGAATACACAGTTGTCCTTCATTGGAAGAAGTCATAGGGGATGAATTTGGACAAGCAGAAAATTATTGTTCAAGGCTAATAAAGCTCCCTTTTGATTCCAATAGTGCAAGGAACAGTCTGATGCACACCCATGGACAGAAAAGGTGGTGGCATAAACTGCAGTGGGAAGATGAAGCCACTGAGAATCTCTTTGCCTCAATATATGTACCTTCGTGTAAAATTCGCCAAAGAATATAG 2022 0.3961 MGRIVTQKKGEIRELIDKGHFDVVAQEMPHVLVDELPLEATVGLESTFDDLGACFDDDHVGVIGLYGMGGVGKTTLLKKFNNEFLPSKFYDVVIWVVVSKEADIESVQQNKQEKLNVPDGKWADLLKLGIPLPDMNNGSKVIFTTRSMEVCRYMDANRCIKVECLAPKEAFELFKEKVGEETLNSHPEIFHLAQIVAKECEGLPLALITVGRSMARKTLPEWKRAIRTLKNYPSRFSGIVDYVYCLLEFNSLPSAIHKSCFLYCSIFPEDYNIRIDELIQPWIAEGLLAEFGDDVYEARNQGEEIIASLKFACLLEDRKRENRIKMHDVIRDMALWLAFNHGSNSRNTELTNFPDEIFRTSNYLRVLDLSGNKRVKKLPASIGELVHLQHLDLSGTDIQELSRELQNLKKLRCLLLNCICNMLVFPRSLISSLLSLQVFSKLPWEDQCILPDLGEPEETILLQELECLEKLQDIRISLFCFSSMQVLLKSPKLQRCIRHLRVISRFNSTPHVILFSLLSKMQHLEALSITISSSPSLDYDRKTEYSSQDSMTDCIPTSSKFTEHDYTVGLRELSLEGCGMFNLSWPTCAPSLQLLRIHSCPSLEEVIGDEFGQAENYCSRLIKLPFDSNSARNSLMHTHGQKRWWHKLQWEDEATENLFASIYVPSCKIRQRI 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01384 673 PANTHER DISEASE RESISTANCE PROTEIN RP 46 605 IPR044974 GO:0006952
Pste5g01384 673 Gene3D - 25 127 IPR027417 -
Pste5g01384 673 SUPERFAMILY L domain-like 325 633 - -
Pste5g01384 673 Coils Coil 391 411 - -
Pste5g01384 673 Gene3D Ribonuclease Inhibitor 336 640 IPR032675 -
Pste5g01384 673 PRINTS Disease resistance protein signature 62 77 - -
Pste5g01384 673 PRINTS Disease resistance protein signature 200 214 - -
Pste5g01384 673 PRINTS Disease resistance protein signature 359 375 - -
Pste5g01384 673 Gene3D - 248 335 IPR036388 -
Pste5g01384 673 Pfam Leucine rich repeat 347 398 IPR001611 GO:0005515
Pste5g01384 673 Pfam NB-ARC domain 57 119 IPR002182 GO:0043531
Pste5g01384 673 Pfam NB-ARC domain 125 233 IPR002182 GO:0043531
Pste5g01384 673 FunFam Probable disease resistance protein At5g66910 164 250 - -
Pste5g01384 673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 264 IPR027417 -
Pste5g01384 673 Gene3D - 164 247 IPR042197 -
Pste5g01384 673 FunFam Probable disease resistance protein At1g63360 249 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01384 Pste-Chr5 8916164 8918523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01384 63 334 WRKY Transcription Factor Family AT5G45050 23.718 1.85e-06 49.7