Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01383 CAAACAACTACAAGTGTTCTTCCTCTGTACACACAACTCTGTTCCTAGTTCATAGTACCGTCCTTTACCTCGTATACATCAAAATGGAAGGAGATGGGTATTCTGGTAGCTTTTTTCAGAGGTGCAAGCCTTACATAGCTATGATTTCTCTGCAATTTGGCTTTGCTGGAATGAATATAATTACAAAAGTTTCCCTCAACCGTGGAATGAGCCACTATGTGCTTGTTGTTTATCGACATGCCTTTGCTACAGCAGCTATTGCTCCTTTTGCTCTTGTTCTAGAGAGGAAAGTGAGACCCAAGATCACATTTCTCATGTTCATGCAAATATTCGTGTTGGGTCTCCTTGGGCCTGTGATTGATCAGAACTTATACTATGCGGGGTTGAAATTTACTTCCCCTACCTATTCATGTGCCGTAAGCAACATGCTTCCTGCAATGACGTTTGTGATGGCTGTTATTTGCAGGATGGAGAAAGTGGATATAAGAAAGTTAAGATACCAAGCAAAGGTGATTGGAACTGTTGTAACAGTTGCTGGTGCCATGTTGATGACATTGTACAAAGGGCAAGTCATCAATTTCTTGGGGTCTAAGTACATGCATCACCCCAGAAACTACGAACCTGAAAACACCACTGATTCGGGTGAAAAGGATTGGTTTACCGGTTCCATTCTTCTCATAATTGCCACCCTTTCTTGGGCAGCTTTCTTCATCCTTCAGGCAAGTAATCAAGCCGTGACATTAAGGAAATACCCTGCTCAGCTCTCCCTCACAGCACTTGTGTGTGCCTTAGGTACACTGCAATCAATTGCAGTTACCTTTGTCATGGAGCACAAACCATCTGTTTGGACCATTGGCTGGGACATGAACCTTCTTGCTGCAGCCTATGCTGGAATAATATCATCAGGTATCACCTACTATGTCCAAGGAATTGTCATGCAGAAAAAAGGGCCTGTTTTTGTAACTGCTTTCAGCCCTTTGATGATGATTATTGTAGCCATCATGGGTGCTTTCATGCTCGCAGAAAAAATATATCTTGGAGGGGTGCTTGGAGCTATTCTCATAGTAATGGGACTTTACTCGGTTCTATGGGGCAAATACAAAGAAAACAAAGAGAAAGAAGAAGAGACAACCATTGAAATAATGAAGTGTTGTTCAGAAAATGGGAGATTGGAAACTGTGGTGGAAGATGCTGAAACAAACAACGACATTGAAATGCAAAAGGGTGCAGCCTCCAGAGAGTTAAGGGTAGCCATTAGTGTTCCAAAAGTTTAAAGTGGTACAGATTATTAGAAAGAGATGAATAATAGAGGCTGCAATGAAAAAGGGTCGTTAATTGAGAGCAGAAAAATTACGAGGGGTTTTTTTTTTGTACTACTCACCATCTTTCTTCGGAAAATTAACTAAGGCTTTTTTGTTTTTAGTGGTTTGATTAGGACCTTCTGTGTGGACCATACTGTGTCCATAATGTAACTTAATTTTTGCACATTTTGGTTAAAGGAAAAATTGACATTGCAGA 1518 0.4078 MEGDGYSGSFFQRCKPYIAMISLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKITFLMFMQIFVLGLLGPVIDQNLYYAGLKFTSPTYSCAVSNMLPAMTFVMAVICRMEKVDIRKLRYQAKVIGTVVTVAGAMLMTLYKGQVINFLGSKYMHHPRNYEPENTTDSGEKDWFTGSILLIIATLSWAAFFILQASNQAVTLRKYPAQLSLTALVCALGTLQSIAVTFVMEHKPSVWTIGWDMNLLAAAYAGIISSGITYYVQGIVMQKKGPVFVTAFSPLMMIIVAIMGAFMLAEKIYLGGVLGAILIVMGLYSVLWGKYKENKEKEEETTIEIMKCCSENGRLETVVEDAETNNDIEMQKGAASRELRVAISVPKV 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01383 396 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020
Pste5g01383 396 Pfam EamA-like transporter family 193 335 IPR000620 GO:0016020
Pste5g01383 396 PANTHER WAT1-RELATED PROTEIN 15 346 IPR030184 GO:0016020|GO:0022857
Pste5g01383 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 340 - -
Pste5g01383 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01383 Pste-Chr5 8915969 8918460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01383 1 394 Nodulin-like Gene Family AT5G07050 61.654 5.12e-170 479