Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01381 AGCAAATGAAGGACATTTCGTGGTTTTCTTTCTCCTAGCGTTGTTCTGCATAGCGCAGTTTCCCCGATACCCTGAAATATGGGTTATCTGAGCAAAGCTTCCAAAACCCTAAGGCAATCAAATTACCTATCGTTACTGAACAATTTCAATTTCAACCCATTGACCTACAGATTAACTCGTGAACGGTTTCCTGTGACCCGTGCACTGTTCTGTTCCCAGTCACGCCAAAACAGCACCTCAACTAGAGAGAAAAGTATCATTGATTTGAGCCAATACCCTCCAGAGCTCGTTAGGAACTTCTCAATCATTGCACACGTTGATCATGGCAAATCCACCCTCGCTGATCGGCTTCTAGAACTCACTGGAACCATTAAGAAAGGCCATGGCCAACCCCAGTATCTTGACAAATTGCAGGTGGAGAGAGAAAGGGGAATCACAGTTAAAGCCCAGACAGCAACAATGTTCTATAAGCACAGTGTAAATGGTGATGATTGCAGTGATGGAAAACAGTCACCTAATTTTTTGCTGAATCTCATTGACACTCCTGGACATGTTGATTTTAGTTATGAAGTGTCAAGATCGCTGGCAGCTTGTCAGGGTGTGCTTTTGGTTGTTGATGCTGCTCAGGGAGTCCAAGCACAAACTGTTTCTAACTTTTACCTTGCCTTTGAGTCTAATCTAACAATTGTGCCTGTTATAAACAAGATTGACCAGCCAACTGCTGATCCTGATCGCGTTAAAGCCCAATTGAAATCGATATTTGATCTTGACCCAAGTGATGCACTGCTAACATCTGCTAAAACTGGAGAGGGTCTAGAGCAAATTCTTCCAGCAGTCATAGAGCGCATACCTGCTCCTCCTGGGAGAAGTGATTCTCCTTTACGCATGCTTTTGCTTGATTCGTATTACGATGAATACAAAGGTGTAATATGCCATGTTGCTGTTGTTGATGGTGTCCTGCGTAAGGGGGATAAGATTTCTTCTGCAGGTACTGGTCAGTCATATGAAGCTTTAGATATAGGCATCATGCATCCTGAACTTACACCCACAGGAATCTTACTTACTGGACAAGTTGGTTATGTTGTAAGTGGCATGCGGTCAACTAAAGAGGCCCGTGTTGGTGATACAATTTACCATACTCGGAGTGCAGTAGAGCCTCTTCCAGGCTTCAAGCCAGCAAAACATATGGTGTTCTCTGGTCTTTATCCAGCTGATGGATCTGATTTTGAAGCTCTAAATCACGCAATAGAGAGACTGACATGCAATGATGCCAGTGTCTCTATTGGTAAAGAAACTAGCACTGCTCTAGGGCTGGGGTTCAGGTGTGGGTTTTTAGGCCTTCTGCACATGGATGTTTTTCATCAACGGCTTGAACAGGAGTATGGAGCTCATGTTATCTCAACTGTTCCAACTGTGCCTTATATATTTGAGTTTTCTGATGGAAGCAAGTTAGAAGTTCAGAATCCTGCTTCATTACCCTCTAATCCCAAGAATAAAGTTACAGCCTGTTGGGAACCTACAGTGATAGCTACTATAATCATTCCTAGTGATCAACGGGCATTTATGAAGTACCGCCTTCCTTTGAGAGAAATTGTTGTTGACTTTTATAATGAATTGAAGAGTATAACATCAGGGTACGCATCGTTTGATTATGAGGACTCAGAGTATCAACAAGCTGATCTGGTGAAATTGGATATTCTCTTGAATGGACAACCAGTTGATGCAATGGCAACCATAGTTCATAACATGAAAGCTTATCGTGTTGGGCGTGAACTGACGGAGAAATTGAAGAACATCTTAGACAGGCAAATGTTCGAGGTAAACATACAAGCTGCTATTGGGTCAAAAATTATAGCAAGGGAGACGATTTCTGCTATGAGGAAAAATGTTCTTGCGAAGTGTTATGGTGGTGATGTTACTCGAAAAAGGAAGCTATTGGAGAAGCAGAAGGAAGGAAAGAAGCGAATGAAGCGTGTTGGTTCTGTGGATATACCACAAGAAGCATTTCATGAACTATTGAAGGTTTCTTAGCTGACACGCATGAGGATATTTGAGTATTGTACAACGGTTTTTTAACCTAGTTAGACTCAAGTCCAAGGGATGATTCTCTGTGTGACGTTATGACAACCATTATAGGTGGAGGAAGCAATGAGACATAGGTAGTATCAATTGACATTTGGTTTAAGTGAACTGGAACAAAATTCTAGTATCAAGGCACAAAGTAGTCTCATGCACTAAAATTATTCAATTTTCTGCTCATTTTTCTGTTCTTACATATCTATAAAAAAATTCTTAGAATTATAATTTTATGTAGTAATGTTATTTGTTCTCTTAATCTCAGACCACTCATCGAAGTGTAGGAAACGACTCCTGCCGTATGTTCTGTTCAAAGCGATTCAGAGTGAGCCTTGAAAAAATAAAGCCAGTGCTGGTTAATTAATGGTTCCCATGGACCAGCACACCTGCTACAGTCCTGTTGAAGCATATATTTGTCTGACACACCTTACAACTATTTTGTAGCAGAATTTTCAGCTTTATCTGTGGCCATTGTTCTTCATACAGCTTACAAATTACAATAATGTTGTCCTTTTAGTGATTTCTGA 2603 0.4095 MGYLSKASKTLRQSNYLSLLNNFNFNPLTYRLTRERFPVTRALFCSQSRQNSTSTREKSIIDLSQYPPELVRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKHSVNGDDCSDGKQSPNFLLNLIDTPGHVDFSYEVSRSLAACQGVLLVVDAAQGVQAQTVSNFYLAFESNLTIVPVINKIDQPTADPDRVKAQLKSIFDLDPSDALLTSAKTGEGLEQILPAVIERIPAPPGRSDSPLRMLLLDSYYDEYKGVICHVAVVDGVLRKGDKISSAGTGQSYEALDIGIMHPELTPTGILLTGQVGYVVSGMRSTKEARVGDTIYHTRSAVEPLPGFKPAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVSIGKETSTALGLGFRCGFLGLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEFSDGSKLEVQNPASLPSNPKNKVTACWEPTVIATIIIPSDQRAFMKYRLPLREIVVDFYNELKSITSGYASFDYEDSEYQQADLVKLDILLNGQPVDAMATIVHNMKAYRVGRELTEKLKNILDRQMFEVNIQAAIGSKIIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVS 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01381 650 Gene3D Elongation Factor G (Translational Gtpase), domain 3 362 443 - -
Pste5g01381 650 Gene3D - 489 533 - -
Pste5g01381 650 Pfam GTP-binding protein LepA C-terminus 542 648 IPR013842 -
Pste5g01381 650 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 69 261 IPR000795 GO:0003924|GO:0005525
Pste5g01381 650 FunFam Elongation factor 4 68 262 - -
Pste5g01381 650 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 109 124 IPR031157 -
Pste5g01381 650 Gene3D Translation factors 264 361 - -
Pste5g01381 650 SUPERFAMILY EF-G C-terminal domain-like 478 548 IPR035647 -
Pste5g01381 650 CDD EF4_II 268 353 - -
Pste5g01381 650 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 282 IPR027417 -
Pste5g01381 650 FunFam Translation factor GUF1, mitochondrial 263 361 - -
Pste5g01381 650 CDD EF4_III 369 444 - -
Pste5g01381 650 Gene3D - 69 262 IPR027417 -
Pste5g01381 650 CDD LepA 72 260 - -
Pste5g01381 650 SUPERFAMILY Translation proteins 259 356 IPR009000 -
Pste5g01381 650 FunFam Translation factor GUF1, mitochondrial 362 443 - -
Pste5g01381 650 Pfam Elongation factor Tu GTP binding domain 71 258 IPR000795 GO:0003924|GO:0005525
Pste5g01381 650 SUPERFAMILY EF-G C-terminal domain-like 370 447 IPR035647 -
Pste5g01381 650 Gene3D - 534 608 IPR038363 -
Pste5g01381 650 NCBIfam translation elongation factor 4 71 491 IPR006297 GO:0005525
Pste5g01381 650 Pfam Elongation factor G C-terminus 490 540 IPR000640 -
Pste5g01381 650 NCBIfam small GTP-binding protein domain 75 249 IPR005225 GO:0005525
Pste5g01381 650 Hamap Elongation factor 4 [lepA]. 67 650 IPR006297 GO:0005525
Pste5g01381 650 PRINTS GTP-binding elongation factor signature 73 86 IPR000795 GO:0003924|GO:0005525
Pste5g01381 650 PRINTS GTP-binding elongation factor signature 116 124 IPR000795 GO:0003924|GO:0005525
Pste5g01381 650 PRINTS GTP-binding elongation factor signature 151 161 IPR000795 GO:0003924|GO:0005525
Pste5g01381 650 PRINTS GTP-binding elongation factor signature 203 212 IPR000795 GO:0003924|GO:0005525
Pste5g01381 650 PANTHER TRANSLATION FACTOR GUF1-RELATED 48 491 IPR006297 GO:0005525
Pste5g01381 650 FunFam Translation factor GUF1, mitochondrial 534 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01381 Pste-Chr5 8909034 8915640 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01381 71 212 Eukaryotic Initiation Factors Gene Family AT1G56070 40.972 1.22e-23 104