Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01375 ATACACTCTCATTCTGCCCTTTTCCCATTATTCACCCCAAATTCCTTCCCTCCCTCGTCCACAATCAAAACATTATATTATATTTCACCGTTAAAAAATGCAGGTTACCTTCCATGTGCAAAACCCTTCTCCTCCTCAACATTCTTAACCACATTTTTTGTTGTTTCTCCCAGGTTTAAGATGCCATGCGATGTGTCGCATCTTCTATTTCTGCTTTTGACTTTCCTTCTCACTTCCCTTTGACCTTTCACAGTTCCTTCAGGTTGGCATAAGTGTCTGTTGGGTGATCATAAATGGCGCCGAATCCAAGGGTGGTAGCTGCCTTTGCTGCAATGTCCAATCTCGGGATTCATGAATCAAAAGTGAAACCAGTGTTAAAGAAGCTGCTTAAATTGTATGATAAAAATTGGGGACTAATTGAAGAAGAAAGTTATAGGGTTCTGGCTGATGCAATATTTGAGGAGGAAGAGAATAAGGTGAATGAGCCAGGCCAGAATAATAAAAACAAGAAGGACGTATTAGTGGATGATGAAGAAGCTCCAATGCATGAGGAGCCTTTGCGACCTTTGAAGAGGTTGCGCTTGAGAGGCCAAGAGGGTCAATCTTCACGCCCTCTGACTAGTGGTCGTCCCATCTCAGCTGCCTTTCCCTTGAAAATACCTAAATTGGAAGATGGCACAGTGCCTGAGAGTAGTTCCAGACTGCAGCCTCAAACTACAGCAGCATTATCTGATGGAAATGCTAGGATTGGTGCTCATCATGTTCCCCCACAAGATGCCCTTGTTGAGAAGGGAAAAAAACCTGTATCACCTCAAGTTACTCCCAGAGGTAGAAGGTTGATGTCGGACAGAACTCACCTTGCAGAACCACTTAAAGAGCCAACAGTTGAACCAGGAGCTTCTCCATCGGCTAATAAAAAAATGCCTTATCCCTTTACTTTTATCAAGCCCAAGGATGAACCTGTTGATGATATATTAGATTTCGAGATCCCCCTTGCAGTGATTCCTCCTGAACCATCAAGTGGAGGAGACCCACTACCTGATGCAGCTGGAAAGCAAGATGGGCATGAGACTACGGTATCACAATACAGAGATGAAGATGTTGAACGTGACATTATTTTTCCTTTCTCAAATGAAGAAGCAACTTCTAATGTAGATGTAGCATCGTCATCTATGGGAGAGGAACAATCTGTAAAGATAACACAGACTGATGATGTTTCAAAGAAATCTGAGACCAATGGCTCACTGATTGACAGAGGAAATAAAGATTCAGTCATTGCAAATGGGTCAACCAGTGTTAAGGCTTCTTCTGCCATGGCTGATCCTCAAGTTCCTAGTTCTCTATCCTGTCTGAGTGATCTGGACCATGCTGTATTAGCTTCCAAGAAGGTTGAAGTGAATGGTTTCTTACAAAGTGATGCTGGGAAGGAGCTGGAGGATCTTATATCCCCAAATTCACATACTTTAGCTATCCTAAAACATCAGGTTATAACTAATGATGTAAGGGCTGTTCATGATGTTAATGACCTAACAAAGGGAGAAGAAAGAGTGAAGATTTCATGGGTGAATAACACTTCTAATGATTTCCCACCACACTTTCACTACATACCCCGAAACATTGTATTCCGAGATGCTTATGTTAATATTTCTCTGTCTGGTATTGGGAATGGGGATTGTTGTTCAACTTGTATGGGCAATTGTGTCATGTCATCTAAGTCATGTTCTTGTACAAATAAAACTGGGGGTGAATTTGCTTACACTGCACAAGGCCTAGTAAAGGAAGAGTTTTTGGATGAGTGTATTGCCATCAGCCGTGATCCTCTAAATTATTTCTATTGCAAAGCCTGTCCACTTGAAAGATCAAAGAATGATGATTGTTTAGAACCATGTAAAGGACACTTAAGGCGGAAGTTTATTAAAGAGTGCTGGAGCAAATGTGGCTGTGGGAAACATTGTGGGAATCGGGTTGTCCAGCGGGGAATAACATGCAAGTTGCAGGTGTTTTTGACTTCAGACGGAAAAGGGTGGGGTCTTCGTACCTTAGAGGGTCTTCCAAAAGGTGCATTTGTATGTGAGTTTGTTGGGGAAATTCTAACAATAAAAGAGTTGCACGAGAGGAACATGAAATATCCCAAAAATGGGAAATATACATACCCAATTTTATTGGATGCAGATTGGGGTTCAGGAGTTGTGAAGGATAGAGAGGCTCTTTGCTTATATACGGCGTCATATGGAAATGTTGCAAGATTTATTAATCACAGATGTTTGGATGCAAACTTGGTTGAGATCCCAGTTGAAGTTGAGGGCCCAACTCATCATTACTATCATTTTGCCTTCTTCACATCAAGAAAAATAGAAGCACAGGAAGAGCTCACCTGGGATTATGGTATCAACTTTGATGACCATGATGAGCCTGTTGAACAGTTCCAGTGTAGATGTGGCAGTAAATTCTGCAGGAATATTAAGCGATCAAATAGATCCATCAGATCGTCAATTGCATGATGGCTATTCACGGCCAAACCCGTTTTGTGGTTTGATGCTGCCTTGTCCATGGATTAGTAGTAACAATTCCAACCTACTGATTTTGTTTCCTTTGTATTTTATTTTGCATTATTTTTGTTTCGAGGTTGGATACAAGTTACACAGCTTCAAGGAAAAACTACAAGTCTTAACTAGAAGAAAGAAAGAAAATAACATTTAGGCATTAATAACTCTGAATAGTTCAAGGTTGTCCAATGCCAATAAATAATTCTATCTCTAAGTTTATGTTGTGC 2773 0.4086 MAPNPRVVAAFAAMSNLGIHESKVKPVLKKLLKLYDKNWGLIEEESYRVLADAIFEEEENKVNEPGQNNKNKKDVLVDDEEAPMHEEPLRPLKRLRLRGQEGQSSRPLTSGRPISAAFPLKIPKLEDGTVPESSSRLQPQTTAALSDGNARIGAHHVPPQDALVEKGKKPVSPQVTPRGRRLMSDRTHLAEPLKEPTVEPGASPSANKKMPYPFTFIKPKDEPVDDILDFEIPLAVIPPEPSSGGDPLPDAAGKQDGHETTVSQYRDEDVERDIIFPFSNEEATSNVDVASSSMGEEQSVKITQTDDVSKKSETNGSLIDRGNKDSVIANGSTSVKASSAMADPQVPSSLSCLSDLDHAVLASKKVEVNGFLQSDAGKELEDLISPNSHTLAILKHQVITNDVRAVHDVNDLTKGEERVKISWVNNTSNDFPPHFHYIPRNIVFRDAYVNISLSGIGNGDCCSTCMGNCVMSSKSCSCTNKTGGEFAYTAQGLVKEEFLDECIAISRDPLNYFYCKACPLERSKNDDCLEPCKGHLRRKFIKECWSKCGCGKHCGNRVVQRGITCKLQVFLTSDGKGWGLRTLEGLPKGAFVCEFVGEILTIKELHERNMKYPKNGKYTYPILLDADWGSGVVKDREALCLYTASYGNVARFINHRCLDANLVEIPVEVEGPTHHYYHFAFFTSRKIEAQEELTWDYGINFDDHDEPVEQFQCRCGSKFCRNIKRSNRSIRSSIA 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01375 735 SMART set_7 565 704 IPR001214 GO:0005515
Pste5g01375 735 MobiDBLite consensus disorder prediction 60 100 - -
Pste5g01375 735 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 735 IPR025776 -
Pste5g01375 735 ProSiteProfiles SET domain profile. 565 698 IPR001214 GO:0005515
Pste5g01375 735 MobiDBLite consensus disorder prediction 237 270 - -
Pste5g01375 735 SUPERFAMILY SET domain 419 721 IPR046341 -
Pste5g01375 735 SMART preset_2 409 549 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste5g01375 735 MobiDBLite consensus disorder prediction 60 186 - -
Pste5g01375 735 MobiDBLite consensus disorder prediction 285 326 - -
Pste5g01375 735 CDD SET_SETDB-like 433 698 - -
Pste5g01375 735 Gene3D - 1 60 IPR043017 -
Pste5g01375 735 ProSiteProfiles Pre-SET domain profile. 458 562 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste5g01375 735 MobiDBLite consensus disorder prediction 303 318 - -
Pste5g01375 735 Pfam Pre-SET motif 413 557 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste5g01375 735 Gene3D SET domain 398 724 IPR046341 -
Pste5g01375 735 MobiDBLite consensus disorder prediction 285 302 - -
Pste5g01375 735 ProSiteProfiles Post-SET domain profile. 709 725 IPR003616 -
Pste5g01375 735 Pfam SET domain 577 698 IPR001214 GO:0005515
Pste5g01375 735 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 -
Pste5g01375 735 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 731 - -
Pste5g01375 735 MobiDBLite consensus disorder prediction 131 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01375 Pste-Chr5 8856350 8863795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01375 411 721 Su(var)3-9 homologs AT1G73100 30.488 5.59e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pste5g01375 Pre-SET 6.9e-18 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01375 5 8856350 8863795 Pste5g01375 5 8856350 8863795 ECH
Pste4g00755 4 5850998 5861556 Pste5g01375 5 8856350 8863795 PCT