Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01368 GAACTTCATAGGACCCAGGAACCCCCCATGGCTAACTGCTGTTAAACGCAGATACAGGAGAGAGAGACCACGGTTGTTGCTGTTCTCGTTTTCTTCTGAAACTCAATTGTTTCAAACGGGAAAAAAGAGAAGAGAAGAGGAAGACAAAGTTGGATTGAGTTGCGTTGAGAGAGGAAGATGACAGAGGTGTCGATGTGTATCAACAGCGTTTCTGAGCTGAGTCCAGACGAGGAGAGGATCATGATCAAAGACATTGCTCTCGCTGCCCAAGCTAACAGCAAAGAAGGCGACACCTTCTTCTTAATCACTCAGAGATGGTGGCAACATTGGATTGAATATGTGAACCAAGACCAGACAAATACTTCATATGATGGATCTTCCTTATTAGAACATTCTGATTTGGCCAATTCAAATGCTTTAAAGAGGCCAGCTGGTATTGATAATTCTGATTTGATAGATGATGCTGTGTCAGAGGAGTCTGGTACGGGTATGGAGATTAATGATACTCTTTTAGAAGGTCGTGACTATGTATTACTTCCTCAAGAAGTTTGGAACCAATTGTTTAGATGGTATGGTGGTGGGCCTACATTGGCAAGGAAGGTTATTAGTTCAGGTCTTTCCCAGACTGAATTGGCAGTAGAGGTGTATCCTTTACGGCTTCAATTACTTATGTTGCCAAAAAATGATCATTTCCCTGTAAGAATAAGCAAGAAGGAAACCATTGGACAGCTTCACAGAAAAGCTTGTGAAATATTTGATCTTCAGCCAGACCAAGTAAAAACTTCATGGTTTCCTGAAATTCTAGTGTGTATTTGGGATTACTATTCCCGACGAAAGCATGCTTTGATGAATGATATGGACAAAACTCTCGATGATGCTAATTTACAAATGGACCAAGATATTCTTGTTGAGGTCATCAACCATACAAACAACACAAGTGTTGCTCAAGAAAATGGGTCTGCACAGAGGGAAGCAAATTCCGTTCTTGTGGAGCCTTCAAAATCAAGCTTATCAATTGCTGGAGGCTTATCTGCTAGCAGAGGTGCATCTAGAGGCTACAACATGGACCTTTCTTCATCTCAGAACTTAAACTCTCCAGTTAGAGATGTGGAAAATCCGTATGGAACAAGTGGTGTCACCACAAGAGGCTCATTCGGTGGTCTCACTGGGTTGCTGAATCTTGGCAATACTTGTTACATGAATAGTGCAATACAATGCCTTGTTCATACACCAGAATTTGCTAAGTACTTCAGGGAAGACTATCATCAAGAGATAAACTGGCAAAATCCATTGGGCATGGTTGGTGAACTAGCCCTAGCATTTGGCGAGTTGCTTCGAAAACTATGGGCACCTGGACGAACACCGATTGCTCCTCGGCCTTTTAAAGCAAAGCTTGTTCGCTTTGCTCCTCAGTTCAGTGGGCACAATCAACATGATTCTCAGGAGCTTTTAGCATTTCTTTTGGATGGTCTTCACGAAGACTTGAATCGTGTAAAACACAAACCATATATAAAATCTCGAGATGCTGATGGCCGACCTGATGAAGAAGTGGCTGATGAATATTGGGCAAATCATATTGCACGTAATGATTCTATAATCGTTGATGGACAATACAAGTCAACTTTGGTTTGTCCAGTTTGCAATAAAGTCTCTGTCACTTTTGATCCTTTTATGTACCTTTCCTTGCCTCTCCAGTCCACCACCAGTAGAACCATGACAGTGACAGTTTTTGCTTGCGATGGAGCTACCCTTCCATCTACGTTTACAGTAACTGTCCCTAAGCAGGGACGATGCAGAGATCTCATACAGGCACTTAGCAATGCTTGCTCATTGAAGCATGATGAGAGGCTATTGCTTGCGGAGATACGAAACCATTTGATCCATAGATATTTAGAAGATCCTCTTCTATTGTTGTCAACTATCAAAGATGATGACCATCTTGCTGCTTACAAGATTCCAAAGATAGATAAGAACACCAAGTATCTCCAGTTGATACATCGCCGAAGAGAGCAGAGTAGTGACTCACACGTCATATCAGGATGGAAACCATATGGAACACCTATTGTTTCATTGATTTCTTGTGATGATACAGTCACAAGAGGTGATATACAAGTAATAGTTAATCGTATGCTATCACCACTGCTAAGAAAAGGTAGCAATGTAGAACAAGCTACCACTTCTGAAACAAGCATCCCAAAAGCAACTTCTGATCAATGCAATTATACTTCTTCCGATGATGCATGTGCTGCCAACATGGTGTCAAATTCGGTAAATAAGGATTCTACCAATTCGAAGGCACCGCCAATGCCTACATTACCTCTTCTCTTGGTAGATGATAACAATGCATGCATTGATCTTTCAATGGGAGAGGAGAAGGTAGTTAAACTGTATCCATTGTTACCAAAGATTTTAGTTTATATTGATTGGTCTCAGAAGCTTCTGGAGAAGTATGATACTCATCCACTTGAGACTCTGCCTGAAGTTTTAAAATATGGACCTGTAACCAAGAAAGCTCGTACTGAACCTCTCTCCTTGTATACCTGCTTGGAAGCTTTTCTGCGTGAAGAACCTCTGGTGCCTGAAGATATGTGGTACTGTCCAAAATGCAAAGAGAGAAGACAAGCAAGCAAGAAGCTTGATTTGTGGAGGCTCCCTGAGGTTTTGGTCATTCATTTGAAGAGGTTTTCATACAGCAGGTCGATGAAGCATAAGCTGGAGACTTTTGTTAACTTTCCCATTCATGATTTTGATTTAACTAATTACATAGCCAACAAAAACAATTCTCAGCGTCAACGGTACGAACTCTATGCCCTTACAAATCATTATGGTAGTATGGGTAGCGGACATTACACTGCACATATTAAGCTTTTAGATGAGAACAGGTGGTACAATTTTGATGACAGCCACATATCACTGATTAGTGAAGATGAGGTTAACACGGCTGCAGCCTATGTTCTATTTTACCGGCGGGTGAAGACTGTTGATGACGCCGTTAGCAATGGGGCTTAGCCTTCCATGTTGGCAGCTTAATGTATAAATTAGATGTCAAGAACATACCTGGTTATTCCAGATAATTTTTAGAAAAGGGTAGGTGAACAATTTCATATGTATGCCTTCATTTGAGGATATTTTTATTTATTGTATTTGTATGAAAAGGCACAAGCCTGTTGATGCCTGTGTAGTCAATGAAATAATTCTTTTCCTTCCTCTCTTTACTTTGTTTTTGGAGAGGGTTGGTGGGAAGTTGAATTTCAGTTTCACAAACATGTGGTAACTGTCTTGTTCAAGCTCTTCAAAACACTTGTAGCTGTTGGTAAACCTGAAATTGCTCATAATGCTAGCCAATTATTTTTGGTTCCC 3360 0.408 MTEVSMCINSVSELSPDEERIMIKDIALAAQANSKEGDTFFLITQRWWQHWIEYVNQDQTNTSYDGSSLLEHSDLANSNALKRPAGIDNSDLIDDAVSEESGTGMEINDTLLEGRDYVLLPQEVWNQLFRWYGGGPTLARKVISSGLSQTELAVEVYPLRLQLLMLPKNDHFPVRISKKETIGQLHRKACEIFDLQPDQVKTSWFPEILVCIWDYYSRRKHALMNDMDKTLDDANLQMDQDILVEVINHTNNTSVAQENGSAQREANSVLVEPSKSSLSIAGGLSASRGASRGYNMDLSSSQNLNSPVRDVENPYGTSGVTTRGSFGGLTGLLNLGNTCYMNSAIQCLVHTPEFAKYFREDYHQEINWQNPLGMVGELALAFGELLRKLWAPGRTPIAPRPFKAKLVRFAPQFSGHNQHDSQELLAFLLDGLHEDLNRVKHKPYIKSRDADGRPDEEVADEYWANHIARNDSIIVDGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQSTTSRTMTVTVFACDGATLPSTFTVTVPKQGRCRDLIQALSNACSLKHDERLLLAEIRNHLIHRYLEDPLLLLSTIKDDDHLAAYKIPKIDKNTKYLQLIHRRREQSSDSHVISGWKPYGTPIVSLISCDDTVTRGDIQVIVNRMLSPLLRKGSNVEQATTSETSIPKATSDQCNYTSSDDACAANMVSNSVNKDSTNSKAPPMPTLPLLLVDDNNACIDLSMGEEKVVKLYPLLPKILVYIDWSQKLLEKYDTHPLETLPEVLKYGPVTKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPKCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDFDLTNYIANKNNSQRQRYELYALTNHYGSMGSGHYTAHIKLLDENRWYNFDDSHISLISEDEVNTAAAYVLFYRRVKTVDDAVSNGA 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01368 943 Pfam DUSP domain 37 143 IPR006615 GO:0004843
Pste5g01368 943 Gene3D Cysteine proteinases 679 938 - -
Pste5g01368 943 Gene3D - 7 156 IPR035927 -
Pste5g01368 943 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 330 932 IPR028889 -
Pste5g01368 943 SUPERFAMILY DUSP-like 15 143 IPR035927 -
Pste5g01368 943 ProSiteProfiles DUSP domain profile. 14 143 IPR006615 GO:0004843
Pste5g01368 943 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 238 931 - -
Pste5g01368 943 Gene3D - 157 253 - -
Pste5g01368 943 Gene3D Cysteine proteinases 320 553 - -
Pste5g01368 943 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 331 346 IPR018200 GO:0004843|GO:0006511
Pste5g01368 943 Pfam Ubiquitin carboxyl-terminal hydrolase 330 929 IPR001394 GO:0004843|GO:0016579
Pste5g01368 943 SUPERFAMILY Cysteine proteinases 328 932 IPR038765 -
Pste5g01368 943 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 874 891 IPR018200 GO:0004843|GO:0006511
Pste5g01368 943 SMART dusp 33 146 IPR006615 GO:0004843
Pste5g01368 943 CDD Peptidase_C19R 777 930 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01368 Pste-Chr5 8823917 8836245 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01368 785 934 Miscellaneous Gene Families AT4G31670 33.987 1.65e-16 82.4