Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01364 ATTTACAAAATCCCTCTTGGATTTTGAAGAAGAGGGTTGATCTCTTAAGGGTGTATGCTGCTTTTGAAAGAGATCCGACAATGATGAGTAATGGGGAGCCTTTGGATTTGTACAGGCTTTTCATGGTTGTGAAGGAGAAAGGTGGTTATGATGCTGTTTGTAAGAACAGGTTGTGGGATTTGGTGGGGGAAGAATATGGGTTGGGTGTGAAGGTTGGTTCCTCTGTGGAACTTGTTTACAGTAAGAACTTGAGTGCTTTAGATACATGTTTGAAGAATGTTGCTGATGGTAAGTTCACTGAGTGTGGTTTAGTGGATGACAGAGTAAAGTTTTGCAAGCATATGATGGAGAAGCAAGCTGAATTGGTGTTGGGTGGTTATGGTAAGGAAGAGGCTGAGGATGATCTTGATAGAAGGGTGTCTGACTGTCCGGATGGAAGGAAGTTGTGTGGTAGTAATAGAGTGAAGGGTGTGAAACCAGAGTCAAATAGGGCTGAACTTGAGAGGGTATACGACCATCCAGATGGAAGTAAGTCGTGTGCTAGTGATAGTGGGAAGGACAAGATCTCGGATTCTAATGGGGATGAATATGATAATGTATGTGACTGTTTAGATAGGAGGAAGTTGTGTGGTACCAATATGGTGAAGGATGTGAATCCAGAGTCTAATGAGGCCAAGAAAGTTCAGACTGAAAGACTTGTTGATTTGGATATGATGGACCATCGGATGGATGAGCCTATTCTCGGAAACTTGAGCATACTTAATACTGAAAGGGGTATGCCAGAAGAGTTTGATGGGGGAAAAATATTAGCCGTGGATGCATCCGATGCTGAAAGCAACATGCCTAGATTGTCGGATGGAAGCAAGAGCTGTAATAACGATGACGACGATAATGATGAAGTCTTGATATTGGATTCATCTGCTGTTGACAAAGAGAGATTTGGGCATAAGAGGAAGAGAGAGTCTAAGTCTGAAATGCTAAGTTGGATCACTAGCATTGCTAGAAATCCTTGTGATCCTGCTGTTGGTTCAATTCCTGAGAAGTTTAAGTGGAAATCTTACAGTTCTCAGGAAATCTGGAAGCAAGCTTTGTTGTTTCGAGAAGCTGTCTTTCTAAAGAAAGATTTTGAGACAACCAGTGAACAACTTAGTTGGCAGGCTCAGAAAGTGCATCCTTCCATGTATGATGATCATGTTGGGTCAGTGTACAATCTTAGACAGAGGTTAAAATGTGACAAGAGAGTTTTGTTGGGAAATGCTACAACTGATGGAGTCTCTTCAGCATCATCTGGAGGAACGCCTGGTGGTTTGGAGAGAACCCCAAGTTCTCATGCTAAAGATCGTGCTGAGAAACAGTTATCTGATTCCTGTACAGCACGTTCAAGTCTTGATAGATATGCCAGAGTGCACATACCTTTGGGGCCAAACCATCAAGCCAAAGTGCCACAATGGACTGGCATGACCTATGATAGTGATTCTAAGTGGCTGGGGAGCCAAATATGGCCTCCTCTAAAAGCTGTAAATTCCAACCGCCTTCTTGAAAGGGAACCCATTGGAAAGGGAAGACAAGATTCATGTGGCTGCCAAGTACAAGGGTCTGTTGAGTGTGTCCGTTTCCACATTGCTCTGAAAAGGTCCAAAGTTAAGTTGGAATTGGGCGAGGCGTTTTATCAATGGAATTTGCACAAGGTTGGTGAAGAAGTTAGGGTTTCTTGGACAGAGCAAGAAGAAAAGAAGTTTGAAGATGTGGTGAAATCAAACCCTGCTTCACTTGATAAATGTTTTTGGGATCACCTTTTCAAAACATTTCCTAAGAAGAGCAGAGAAGATTTACGAAGAGCATATCAGAATAGGCATACTCCAGACTGCATTGACAGTGATGATGATGAATCAGAATTTACACCATTGAGGAAAGAGAAAGATGAAAGTATTCGGGAAGCAAACAACTGTAAAGACAACTTTGAAGTTGGGGTTGCTTTTAGTTTACATGCTTCCATTTTTGAGACATGCCTTCTGTCTGTTGGCAGTGATATGTTGCAGCCA 2042 0.4226 MMSNGEPLDLYRLFMVVKEKGGYDAVCKNRLWDLVGEEYGLGVKVGSSVELVYSKNLSALDTCLKNVADGKFTECGLVDDRVKFCKHMMEKQAELVLGGYGKEEAEDDLDRRVSDCPDGRKLCGSNRVKGVKPESNRAELERVYDHPDGSKSCASDSGKDKISDSNGDEYDNVCDCLDRRKLCGTNMVKDVNPESNEAKKVQTERLVDLDMMDHRMDEPILGNLSILNTERGMPEEFDGGKILAVDASDAESNMPRLSDGSKSCNNDDDDNDEVLILDSSAVDKERFGHKRKRESKSEMLSWITSIARNPCDPAVGSIPEKFKWKSYSSQEIWKQALLFREAVFLKKDFETTSEQLSWQAQKVHPSMYDDHVGSVYNLRQRLKCDKRVLLGNATTDGVSSASSGGTPGGLERTPSSHAKDRAEKQLSDSCTARSSLDRYARVHIPLGPNHQAKVPQWTGMTYDSDSKWLGSQIWPPLKAVNSNRLLEREPIGKGRQDSCGCQVQGSVECVRFHIALKRSKVKLELGEAFYQWNLHKVGEEVRVSWTEQEEKKFEDVVKSNPASLDKCFWDHLFKTFPKKSREDLRRAYQNRHTPDCIDSDDDESEFTPLRKEKDESIREANNCKDNFEVGVAFSLHASIFETCLLSVGSDMLQP 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01364 654 MobiDBLite consensus disorder prediction 395 410 - -
Pste5g01364 654 Gene3D - 1 73 IPR036431 GO:0003677
Pste5g01364 654 SMART ELM2_2 444 496 IPR000949 -
Pste5g01364 654 Pfam ARID/BRIGHT DNA binding domain 4 59 IPR001606 GO:0003677
Pste5g01364 654 MobiDBLite consensus disorder prediction 395 427 - -
Pste5g01364 654 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 615 - -
Pste5g01364 654 CDD ARID 4 61 - -
Pste5g01364 654 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
Pste5g01364 654 MobiDBLite consensus disorder prediction 142 164 - -
Pste5g01364 654 CDD SANT 544 590 IPR001005 -
Pste5g01364 654 SMART bright_3 1 66 IPR001606 GO:0003677
Pste5g01364 654 SUPERFAMILY ARID-like 4 73 IPR036431 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01364 Pste-Chr5 8808216 8814818 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Pste5g01364 ARID 3.1e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01364 5 8808216 8814818 Pste5g01364 5 8808216 8814818 ECH
Pste5g01364 5 8808216 8814818 Pste6g02058 6 9663470 9666523 PCT