Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01361 GTAATTTGGTTTTGCCTTTTGAGGAAATTGAAAGAACATTTTCCTAATCATGCGGTGCAAAACAAATCTCACGTGTGCACCGTTAGATATTTTGTGTGTGCACTCAATGTCCTACGTTACAATTCACAAACATCATTGCATCGGGGAATGTACATTGTACATAGTACTACCACCAATCCCATCACCGAGAGTGATCTTCACGCGCCAAGTTGGCGCGTAGGTTGCCTGCGGCTATTCCTCCAAAAGGGTCCAAAGCCAAAGCGCATTCGTTCGTCACCGTTCACTCTCGAGAGCACCAACCTTAGCCTTGCCGGTGACGGAATTAAAAGCACCCGCCCTAGCTGCATCAATTTCTCTCACCTCAGCTTCACGCGAACTCTTGTCGGAATGTTATTTTTTATATTGCAACCGATGACTTTGAATATTTATCTTATACTCAACTTTTACTTTGTGATCAACAGTTATGATGGTTTAAGGTTTTTAAATTGTTTGTATGCCCCTTCCATGAAGTTTAGATTTGTGTTTAAGATTACCCATTCTGTTTATCTTAGTCTTATATTCATGGCGAGGTTATATAATATGAAGAAACAATGTTCTGACAAGCAATTTGCTTCTTTTTGGTTAACTTTTGATGCTAAAATTGATGACAACTTGTCTGGTTTGGGCAACAAGAACAAAAAGCAGGCATTGAAAATTATGGAAGCACGTCCTGCTTTCTCTATTGAAAGATCAAATGCTAAGCAACTCAATAGCATGGGGATGTCCGAAGCATTTCCTTCATCATTGTCTGTCCTTTCGACGCCTCTAGAAGAGAAACACCCCAAATTATCTGATTCTCAGCCAGCTTTTATGGAAAAAGAGCTTAGAACAAAACCTTTTACTCATTCAAGTCATTTAATTTCCAGTGGAGCAGTTGGGCATATGTTTTCATCTTCTCCTGGATATTCAACTGATCTTCATCACTCTTCCTTTTCATCGCACGAGAAAAACCCTAGAAATACTCATTTTATTTCCCAGTCATTGAGTAACATGGCTTCATTGCCGTTATCTTATTCTTCAAATAGTGAACCTATACCTTCTACAACATCAACTCCTTATTCCAATGGAAACAGTGTTTCCTGGCATGCAGATTCCCTGCCCAGCTTTCTCGATTTCACTGCCAATACCTCCATCGATAATAGTCAAGTAGAAAGTAGTGCTTGCAATGTTATGGCAACTGAAGAGTATTCTAAGCCAAATGATTGGCAGGAGTGGGCTGACCAATTAATCAGTGATGATGATCCTTTGACTTCTAATTGGAATGATATTCTTGCTGAAAACATTCAAGATCTTGAACCAAAGGCGGTGAAGCAGGTCTCAAAATCATCCTCACAACTTCCAATAGCACACCAATCACAAAGCCAACAACTTCCTGCTTCTTCTGGAGAAAATCGTGTTGGTGTTGCTCCATCTTCCTCAGCAAATTCTGCACCTTCCAAGCCACGGATGCGCTGGACACCAGAGCTTCATGAAGCATTTGTGGAGGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCTACCCCAAAAGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATACCATGTTAAAAGCCACTTGCAGAAATACAGGACAGCTAGATATAGACCCGAGTCATCTGAAGGAGCTGCAGAGAAAAAGAGAAGTCCAATTGAGGAGATTTCATCTCTAGATTTGAAAACTGGTATTGAGATCACTGAAGCTCTGCGACTGCAGATGGAGGTTCAAAAACGCTTGCATGAACAGCTTGAAATTCAAAGAAATCTACAGTTGAGAATAGAAGAACAAGGAAGATGCCTTCAGATGATGTTTGAGAAGCAGTGCAAATCTGGCATTGAAACATTTAAGGCATCATCATCCGCCATTGAGAGTCCGTCTAGAGTGTCTTCTGATGCTGTGAAAGATTCTCAAGCCAAAACAGAATTAGAAACCGTTAAAGTGAGCAATAGCAAGTCAGGACCTGATCAACCTAATGACAGTACCACAGTTGAGGAAAGCTCGTTGGAAGTCGGTAAGAAGCAGGATGCTCCTGAAAGTCAAGCTTCTGAGAATCCTGAGAAACATGCTAGTGAAGATATTGCTCAAGCGCCAAAGCGTCCAAGGATAGAGGAGTAAGCCATATGATCTACTGAATCAGCATTGAACTGACAAGACGATACTGATTCATTTAAGATTTTTATTTAGTAAGGAAGACTTGGTAGATTGATGTCTAGAGCTCCATAACTTGAGTTTCCTCTGTCCTGCGGTGTTCAATGAGGACTTGCATGTGTATCTGTCATTTGTTTACAAAAATAATGAGTCAAATTTTTTACCATGACGTTTTTCAAACTTCTTATTTAGCATCCTTGTTAGGATTAGATTCTAGTGTACAGTACAGACAATGCCTACATCTCAATTCATAAGTGAGGAATGAACTAGGAAAGTACTTACCAAATACTACCGACCAAAATTCTATGTTGGTATGTACTTCTCCAATATGAACTTTTTTTTTTAACTGTACCGAAATAATAAAAAGAAGGGTACACAATTCTAGTTTGTAAGTTCGTTGTTAA 2597 0.3989 VIWFCLLRKLKEHFPNHAVQNKSHVCTVRYFVCALNVLRYNSQTSLHRGMYIVHSTTTNPITESDLHAPSWRVGCLRLFLQKGPKPKRIRSSPFTLESTNLSLAGDGIKSTRPSCINFSHLSFTRTLVGMLFFILQPMTLNIYLILNFYFVINSYDGLRFLNCLYAPSMKFRFVFKITHSVYLSLIFMARLYNMKKQCSDKQFASFWLTFDAKIDDNLSGLGNKNKKQALKIMEARPAFSIERSNAKQLNSMGMSEAFPSSLSVLSTPLEEKHPKLSDSQPAFMEKELRTKPFTHSSHLISSGAVGHMFSSSPGYSTDLHHSSFSSHEKNPRNTHFISQSLSNMASLPLSYSSNSEPIPSTTSTPYSNGNSVSWHADSLPSFLDFTANTSIDNSQVESSACNVMATEEYSKPNDWQEWADQLISDDDPLTSNWNDILAENIQDLEPKAVKQVSKSSSQLPIAHQSQSQQLPASSGENRVGVAPSSSANSAPSKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGAAEKKRSPIEEISSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRCLQMMFEKQCKSGIETFKASSSAIESPSRVSSDAVKDSQAKTELETVKVSNSKSGPDQPNDSTTVEESSLEVGKKQDAPESQASENPEKHASEDIAQAPKRPRIEE 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01361 719 Gene3D - 492 551 - -
Pste5g01361 719 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 490 550 IPR017930 -
Pste5g01361 719 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 464 699 IPR044848 GO:0003700
Pste5g01361 719 SUPERFAMILY Homeodomain-like 491 547 IPR009057 -
Pste5g01361 719 MobiDBLite consensus disorder prediction 448 496 - -
Pste5g01361 719 MobiDBLite consensus disorder prediction 449 493 - -
Pste5g01361 719 Coils Coil 581 601 - -
Pste5g01361 719 Pfam MYB-CC type transfactor, LHEQLE motif 578 625 IPR025756 -
Pste5g01361 719 MobiDBLite consensus disorder prediction 657 680 - -
Pste5g01361 719 NCBIfam myb-like DNA-binding domain, SHAQKYF class 493 547 IPR006447 GO:0003677
Pste5g01361 719 Pfam Myb-like DNA-binding domain 495 546 IPR001005 -
Pste5g01361 719 MobiDBLite consensus disorder prediction 694 719 - -
Pste5g01361 719 MobiDBLite consensus disorder prediction 638 719 - -
Pste5g01361 719 FunFam Myb family transcription factor 492 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01361 Pste-Chr5 8791924 8799371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01361 233 671 G2-like Transcription Factor Family AT4G28610 48.330 1.69e-107 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste5g01361 Myb_DNA-binding 1.5e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01361 5 8791924 8799371 Pste5g01361 5 8791924 8799371 ECH
Pste5g01361 5 8791924 8799371 Pste4g01794 4 13414319 13422793 ECH
Pste5g01361 5 8791924 8799371 Pste4g01794 4 13414319 13422793 PCT