Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01359 AGGCCATATCAAAAGCTACACATGACAACCTTTCTAAAGGCTCAAGCTCTGGTCTTTCATATACTCTTCTTGATATCGCTGTTTCCATTGAAAATCAGTTCATCACCTAGAACACAAGCAGAATCCCTTGTCAAATGGAAAAACAGTTTATCACCTCCTCTTCCTCCCTCTCTAAACTCATGGTCCTTAACCAACCTTGGCAACCTTTGCAATTGGGATGCTATTGTTTGTGACAGCACTAACACAACAGTCTCACATATAAACTTGTCTGGTACCAATCTCACTGGGACTCTCACTGCCTTGGATTTTGCCTCCCTCCCAAACCTCACCCAACTCAACCTTAATGGCAACCTTTTTGGTGGGTCAATACCATCATCAATTGGAAACCTCTCCAAGCTCACTTTGTTGGACTTGGGTAACAACTTGCTTGAAGACACACTGCCTTCAGAGCTTGGCCAGCTAAGGGAACTTCAGTATCTTACTTTTTTCAACAACAGTCTTAATGGTACCATTCCCAATCAGCTCATGAATCTCCCTAAGGTATGGCACCTGGACCTTGGATCAAACTATTTCATTACTCCTCCTGACTGGTCCAAATATTCATGCATGCCTTCCGTAACTCACCTGGCTTTGGATCTCAATGTCTTCAACGGGGAATTCCCAAGTTTCATACTTGAGTGCCACAACTTGACATACCTTGACATCTCTCAGAATACATGGAATGGCACAATACCAGAATCCATGTACAGCAATTTGGGCAAGCTTGAATACCTCAACCTCACCAATTCTGGGCTAGAAGGAAAACTGTCACCCAACTTGTCCATGCTATCTAATCTCAAAGAACTTCGTTTAGGTAGTAACAAGTTTAATGGTTCTGTTCCCGCTGAGATAGGATTGATATCTGGGCTTCAAATTCTTGAATTGAATAGCATTTCTGCCCATGGGAAAAGTCCTTCTTCCTTAGGCCAACTCAGGGAGCTACTTCGTCTTGATCTCAGTGTGAATTCTTTTAACTCTGAAATCCCTTCTGAGCTTGGCCTATGCACAAATCTATCCTTCTTGAGTTTAGCATTGAATAGTTTGTCTGGTCCTTTGCCTCTGTCATTAGCTAATCTGGCTAAAATATCAGAATTGGGATTATCAGATAATTCCTTTTCTGGTCAACTTTCTGGTTCAATGATCTCTAATTGGACCCGATTGATCTCCTTGCAAGTACAAAACAATAAATTTGCAGGAAAGATTCCTCCACAGATTGGCCTATTGAAAAATATTAACTACCTCTATCTGTACAATAATATGTTCTCTGGTCCTATTCCTGAAGAGATTGGAAACCTGAAGGAAATGATGGAGTTGGACCTTTCACAAAACCAATTCTCTGGTCCACTTCCATCAACGCTTTGGAACCTGACTAAGGTTCAAGTCATGAATCTTTTCTACAATCAGTTCTCTGGAACCATTCCCATGGACATTGGAAACTTGACCTCACTGCAAATCTTTGATGTCAACACCAATAACTTGCATGGGGCGTTGCCCGAGACCATTGTTCAACTAACTGCTTTAACAACTTTTTCTGTGTTCACAAACAACTTCACTGGAAGCTTTCCAAAAGAATTTGGGAAGAGCAATCCTTCTTTGACTAATGTCTACTTTTCAAACAACAGCTTCTCTGGAGAACTGCCTCCTGACTTGTGCAGTGATGGCAAGCTAACTATTTTGGCAGTTAATAACAACAGCTTTTCTGGGCCACTGCCAAAGTCCTTGAGAAATTGTTTATCATTGATAAGGGTTCGGCTTGATGATAACCAGTTCACTGGAAACATCACAGATGCATTTGGGATACTCCCAAATCTTGTCTTTATCTCACTCAGTGGAAATCAGCTAGTTGGTGAGCTCTCCCCAGAGTGGGGTGAATATGGCAACTTAACTCGGATGGATATGGGAAACAACAAACTTTCTGGAAAAATTCCATCTGAGCTAAGTAAGTTGAGTCAATTGAGGTATCTAAGCCTTCATTCCAATTATTTCACTGGCAATATCCCACCCGAAATTGGAAATCTTGGCCTGCTTTTCATGTTCAACTTGAGTACTAACTATTTATCAGGAGAAATCCCAAAGAGTTCTGGCAGATTGGCTGAACTAAATTTTCTGGATTTATCAAATAACAACTTCAGTGGACACATTCCTAAAGAGCTCGGTGATTGTAAACGCTTACTGAGTCTGAATTTAAGCCATAACAATCTATCTGGGGAGATACCATATGAACTTGGCAATCTGTTCTCACTCCAAATATTGTTGGACCTCAGTAGTAACTCTCTTTCTGGGGCTCTTCCACAAAACATTGAAAAGTTATCATTTTTGGAGATTCTCAATGTCTCACACAACCATCTTTCAGGGACAATCCCACAATCATATTCGATCATGGGAAGCCTTCAATCTATTGATTTTTCTTACAACAACTTTAGTGGTTCGATCCCTACAGGTGGTATTTTCGAGAGGGCAACTGCTGAAGCCTATGTTGGGAACTCAGGTTTGTGTGGTGAGGTAAAAGGATTAACTTGCCTTTCCCAACACAAATCTGGAAGGGTTAACAAAAAAGTTCTTCTTGGTGTTATCATTCCAGTTTGTGTCTTATTTATTGGGATGATTGGTGTTGGAACCCTACTTTGCAAGCACGCCAAAGAGCACATTGATGAAGAGTCCAAAAGCACTGAAAGAAGTGATCAGTCTATTAACATGGTGTGGGGAAGAGATGGAAAATTCACATTTTCTGATATCGTTAAGGCCACCGATGACTTCAACGACAAGTGCTGCATTGGAAAGGGAGGATTTGGAAGTGTTTATAGAGCAAATTTACTCACAGGTCAAGTTGTTGCTGTTAAACGGCTCAACATATTAGACTCTGATGACATTCCAGCAGTGAACCGCCAAAGCTTTCAGAATGAGATACAAACACTTACAGGAGTAAGGCACCGCAATATAATAAAGCTTTATGGGTTCTGTTCTAGGAGGGGACAAATGTTCTTGGTTTATGAACATGTGGAAAGAGGAAGTTTGGCTAAAGTATTGTATGGACAAGAAGGAATACTGGAACTAAATTGGGCTACAAGATTGAAAATTGTGCAGGGAATCGCACATGCAGTTTCATACCTGCACACTGACTGCTCCCCACCCATTGTGCACCGGGATATAACGTTGAATAACATATTACTAGACTCCCACTTAGAACCTCGTCTTGCAGATTTTGGCACTGCAAAGCTGCTAAGCTCAAACAATTCAACATGGACCTCGGTTGCTGAACTAGCACAAACAATGAGAGTCACTGACAAGTCTGACGTGTATAGTGTTGGAGTAGTGGTGTTGGAAACAATGATGGGAAAGCATCCTGGAGAACTCTTGGCTACACTGTCTTCAAACAAGTCTTTCTCATCAATGGATGAACCACAGATGCTGCTGAAGGATGTGCTTGACCAAAGGCTTCCACCTCCAATAGGCCAATTAGCACAAGCAGTAGTAATGACAATGACCATAGCTTTGGCATGCACAAGTACGGCTCCAGAGTCCAGACCTACGATGCGTGCTGTGGCACAAGAACTATCAGCTAGTACACAGCCTTGTCTTGACGTGCCATTTGGCATGATAACCATGAGCAAGCTTATAGGTTTCCATAAATAGTGTGATGCAATCTTCTCTACCAAGGATCTCATCACAATGGTCATAGTTAGGAGGATTGAGAAGAACATGGCCAAAAAGAAGTGTGGAAGACCTCAACTCCTCATGGACATCAAGATCATTAGTATTTAGGTCATAGTCTTCATTTTCATGCTTGTATTTTGTGTCTTTCTTTTGAACTTGTGGAGGTGTACTTAGTTTTCTTCCTTAACTGTGTTTTGGCCTATTTTTGTAATTGTTTGATTAGGATGTGTAGCCAATCTTTTCCAGACTCTTCTAACTCACATATGAAACATGAAAAGACATGTGAATCCCCTTGCCTTCTCCACGAGACGCCA 4007 0.4135 RPYQKLHMTTFLKAQALVFHILFLISLFPLKISSSPRTQAESLVKWKNSLSPPLPPSLNSWSLTNLGNLCNWDAIVCDSTNTTVSHINLSGTNLTGTLTALDFASLPNLTQLNLNGNLFGGSIPSSIGNLSKLTLLDLGNNLLEDTLPSELGQLRELQYLTFFNNSLNGTIPNQLMNLPKVWHLDLGSNYFITPPDWSKYSCMPSVTHLALDLNVFNGEFPSFILECHNLTYLDISQNTWNGTIPESMYSNLGKLEYLNLTNSGLEGKLSPNLSMLSNLKELRLGSNKFNGSVPAEIGLISGLQILELNSISAHGKSPSSLGQLRELLRLDLSVNSFNSEIPSELGLCTNLSFLSLALNSLSGPLPLSLANLAKISELGLSDNSFSGQLSGSMISNWTRLISLQVQNNKFAGKIPPQIGLLKNINYLYLYNNMFSGPIPEEIGNLKEMMELDLSQNQFSGPLPSTLWNLTKVQVMNLFYNQFSGTIPMDIGNLTSLQIFDVNTNNLHGALPETIVQLTALTTFSVFTNNFTGSFPKEFGKSNPSLTNVYFSNNSFSGELPPDLCSDGKLTILAVNNNSFSGPLPKSLRNCLSLIRVRLDDNQFTGNITDAFGILPNLVFISLSGNQLVGELSPEWGEYGNLTRMDMGNNKLSGKIPSELSKLSQLRYLSLHSNYFTGNIPPEIGNLGLLFMFNLSTNYLSGEIPKSSGRLAELNFLDLSNNNFSGHIPKELGDCKRLLSLNLSHNNLSGEIPYELGNLFSLQILLDLSSNSLSGALPQNIEKLSFLEILNVSHNHLSGTIPQSYSIMGSLQSIDFSYNNFSGSIPTGGIFERATAEAYVGNSGLCGEVKGLTCLSQHKSGRVNKKVLLGVIIPVCVLFIGMIGVGTLLCKHAKEHIDEESKSTERSDQSINMVWGRDGKFTFSDIVKATDDFNDKCCIGKGGFGSVYRANLLTGQVVAVKRLNILDSDDIPAVNRQSFQNEIQTLTGVRHRNIIKLYGFCSRRGQMFLVYEHVERGSLAKVLYGQEGILELNWATRLKIVQGIAHAVSYLHTDCSPPIVHRDITLNNILLDSHLEPRLADFGTAKLLSSNNSTWTSVAELAQTMRVTDKSDVYSVGVVVLETMMGKHPGELLATLSSNKSFSSMDEPQMLLKDVLDQRLPPPIGQLAQAVVMTMTIALACTSTAPESRPTMRAVAQELSASTQPCLDVPFGMITMSKLIGFHK 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01359 1223 Gene3D Phosphorylase Kinase; domain 1 892 1012 - -
Pste5g01359 1223 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 542 857 - -
Pste5g01359 1223 FunFam Os07g0541700 protein 1013 1103 - -
Pste5g01359 1223 ProSiteProfiles Protein kinase domain profile. 932 1206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01359 1223 SUPERFAMILY RNI-like 306 628 - -
Pste5g01359 1223 Gene3D Ribonuclease Inhibitor 392 514 IPR032675 -
Pste5g01359 1223 Pfam Protein kinase domain 935 1196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01359 1223 FunFam MDIS1-interacting receptor like kinase 2 36 197 - -
Pste5g01359 1223 PANTHER LEUCINE RICH REPEAT KINASE 2 490 1202 - -
Pste5g01359 1223 SUPERFAMILY L domain-like 543 831 - -
Pste5g01359 1223 SUPERFAMILY L domain-like 55 387 - -
Pste5g01359 1223 Gene3D Ribonuclease Inhibitor 202 391 IPR032675 -
Pste5g01359 1223 Gene3D Ribonuclease Inhibitor 515 854 IPR032675 -
Pste5g01359 1223 Gene3D Transferase(Phosphotransferase) domain 1 1013 1205 - -
Pste5g01359 1223 ProSitePatterns Protein kinases ATP-binding region signature. 938 960 IPR017441 GO:0005524
Pste5g01359 1223 Pfam Leucine rich repeat N-terminal domain 38 78 IPR013210 -
Pste5g01359 1223 FunFam MDIS1-interacting receptor like kinase 2 201 393 - -
Pste5g01359 1223 FunFam Leucine-rich repeat receptor protein kinase MSP1 895 1012 - -
Pste5g01359 1223 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 442 538 - -
Pste5g01359 1223 Gene3D Ribonuclease Inhibitor 37 199 IPR032675 -
Pste5g01359 1223 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1058 1070 IPR008266 GO:0004672|GO:0006468
Pste5g01359 1223 SMART LRR_typ_2 130 154 IPR003591 -
Pste5g01359 1223 SMART LRR_typ_2 445 469 IPR003591 -
Pste5g01359 1223 SMART LRR_typ_2 614 638 IPR003591 -
Pste5g01359 1223 SMART LRR_typ_2 662 686 IPR003591 -
Pste5g01359 1223 SMART LRR_typ_2 710 734 IPR003591 -
Pste5g01359 1223 SMART LRR_typ_2 276 300 IPR003591 -
Pste5g01359 1223 SMART LRR_typ_2 493 517 IPR003591 -
Pste5g01359 1223 SMART LRR_typ_2 807 832 IPR003591 -
Pste5g01359 1223 SMART LRR_typ_2 324 348 IPR003591 -
Pste5g01359 1223 SMART LRR_typ_2 106 129 IPR003591 -
Pste5g01359 1223 SUPERFAMILY Protein kinase-like (PK-like) 909 1198 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01359 Pste-Chr5 8780368 8784755 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01359 2 656 Receptor kinase-like Gene Family AT4G08850 31.587 5.59e-79 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste5g01359 Pkinase 2.5e-37 CL0016