Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01346 ATGGGGTTTCCCGTAGGGTACCCGGAGCTACTGGTCCCAAAGCTCTTCCTCCACGCGCTCTCCCTCCTCGCGTGCCTCCGCTCCCTCGTCTTCGCTCTATTCCGCCTCCTCCACCTCTCCGACCTCCTCGACACCGACGCCGCAGCCGATCTGCCGCCACCTCCGCCGCGCGCCCCCACGCTCTCCGCCCTCCTCATCCGAGACTTCCTCCCGGTGGCGGCCTTCGGGGAGCTCGGGGGTCCCTCTCCTTCAGGATGCGCTGTTTGCCTCAGCGAATTCTCGGCGGAGGAAGAAATCAGGTGTATGGCAAACTGCAAGCACATATTCCACCGGGCCTGCGTAGACCGTTGGATCGATCACGATCAGAAGACGTGTCCGCTCTGCAGAACCCCTTTCGTGCCCCATCACAAGCTCGACGAATATAACCAGCGCCTTTGGGCCGCTTCTGGGATTTCACACTTTTACCAAGATGATTACACTGTTTCACTCTGA 492 0.6077 MGFPVGYPELLVPKLFLHALSLLACLRSLVFALFRLLHLSDLLDTDAAADLPPPPPRAPTLSALLIRDFLPVAAFGELGGPSPSGCAVCLSEFSAEEEIRCMANCKHIFHRACVDRWIDHDQKTCPLCRTPFVPHHKLDEYNQRLWAASGISHFYQDDYTVSL 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01346 163 PANTHER RING ZINC FINGER PROTEIN-RELATED 20 149 - -
Pste5g01346 163 Pfam Ring finger domain 86 129 IPR001841 -
Pste5g01346 163 SUPERFAMILY RING/U-box 85 136 - -
Pste5g01346 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 134 IPR013083 -
Pste5g01346 163 SMART ring_2 86 128 IPR001841 -
Pste5g01346 163 ProSiteProfiles Zinc finger RING-type profile. 86 129 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01346 Pste-Chr5 8706326 8706817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01346 1 150 C3H Transcription Factor Family AT1G63840 46.753 3.15e-48 152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01346 5 8706326 8706817 Pste5g01346 5 8706326 8706817 ECH
Pste5g01346 5 8706326 8706817 Pste6g02034 6 9523316 9523819 PCT